RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 GPR4P46093 362 aa7.42□□□□□ -1.22
NEDD9-204ENST00000448183 KEAP1Q14145 624 aa7.42□□□□□ -1.22
NEDD9-204ENST00000448183 ZNF648Q5T619 568 aaPredicted RBP7.42□□□□□ -1.22
NEDD9-204ENST00000448183 TMEM225Q6GV28 225 aa7.42□□□□□ -1.22
NEDD9-204ENST00000448183 DUS1LQ6P1R4 473 aaKnown RBP7.42□□□□□ -1.22
NEDD9-204ENST00000448183 PIWIL3Q7Z3Z3 882 aaKnown RBP7.42□□□□□ -1.22
NEDD9-204ENST00000448183 SIAH1Q8IUQ4 282 aa7.42□□□□□ -1.22
NEDD9-204ENST00000448183 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.42□□□□□ -1.22
NEDD9-204ENST00000448183 FAM217AQ8IXS0 508 aa7.42□□□□□ -1.22
NEDD9-204ENST00000448183 LRRC25Q8N386 305 aaPredicted RBP7.42□□□□□ -1.22
NEDD9-204ENST00000448183 GTPBP8Q8N3Z3 284 aaPredicted RBP7.42□□□□□ -1.22
NEDD9-204ENST00000448183 TFAP2CQ92754 450 aa7.42□□□□□ -1.22
NEDD9-204ENST00000448183 FAM46BQ96A09 425 aa7.42□□□□□ -1.22
NEDD9-204ENST00000448183 TMEM125Q96AQ2 219 aa7.42□□□□□ -1.22
NEDD9-204ENST00000448183 COQ10AQ96MF6 247 aa7.42□□□□□ -1.22
NEDD9-204ENST00000448183 AP1S3Q96PC3 154 aa7.42□□□□□ -1.22
NEDD9-204ENST00000448183 ATPIF1Q9UII2 106 aa7.42□□□□□ -1.22
NEDD9-204ENST00000448183 INTS6Q9UL03 887 aaKnown RBP7.42□□□□□ -1.22
NEDD9-204ENST00000448183 HIF3AQ9Y2N7 669 aa7.42□□□□□ -1.22
NEDD9-204ENST00000448183 GRXCR2A6NFK2 248 aa7.42□□□□□ -1.22
NEDD9-204ENST00000448183 HMX3A6NHT5 357 aa7.42□□□□□ -1.22
NEDD9-204ENST00000448183 B8ZZF3 427 aa7.42□□□□□ -1.22
NEDD9-204ENST00000448183 EEF1E1-BLOC1S5C9J1V9 151 aa7.42□□□□□ -1.22
NEDD9-204ENST00000448183 CA12O43570 354 aa7.42□□□□□ -1.22
NEDD9-204ENST00000448183 IFNA1P01562 189 aa7.42□□□□□ -1.22
NEDD9-204ENST00000448183 ADORA3P0DMS8 318 aa7.42□□□□□ -1.22
NEDD9-204ENST00000448183 LAMP1P11279 417 aa7.42□□□□□ -1.22
NEDD9-204ENST00000448183 CDK4P11802 303 aa7.42□□□□□ -1.22
NEDD9-204ENST00000448183 HLA-EP13747 358 aa7.42□□□□□ -1.22
NEDD9-204ENST00000448183 GNSP15586 552 aa7.42□□□□□ -1.22
NEDD9-204ENST00000448183 PRMT2P55345 433 aa7.42□□□□□ -1.22
NEDD9-204ENST00000448183 WNT4P56705 351 aa7.42□□□□□ -1.22
NEDD9-204ENST00000448183 CLRN1P58418 232 aa7.42□□□□□ -1.22
NEDD9-204ENST00000448183 FAM189BP81408 668 aa7.42□□□□□ -1.22
NEDD9-204ENST00000448183 LRIT3Q3SXY7 679 aa7.42□□□□□ -1.22
NEDD9-204ENST00000448183 DESI1Q6ICB0 168 aa7.42□□□□□ -1.22
NEDD9-204ENST00000448183 NXPE4Q6UWF7 544 aa7.42□□□□□ -1.22
NEDD9-204ENST00000448183 HMGN2P46Q86SG4 172 aa7.42□□□□□ -1.22
NEDD9-204ENST00000448183 GATSQ8NAP1 163 aa7.42□□□□□ -1.22
NEDD9-204ENST00000448183 NETO1Q8TDF5 533 aa7.42□□□□□ -1.22
NEDD9-204ENST00000448183 ZNF689Q96CS4 500 aaPredicted RBP7.42□□□□□ -1.22
NEDD9-204ENST00000448183 UNKLQ9H9P5 680 aaKnown RBP7.42□□□□□ -1.22
NEDD9-204ENST00000448183 SACM1LQ9NTJ5 587 aa7.42□□□□□ -1.22
NEDD9-204ENST00000448183 C19orf25Q9UFG5 118 aaPredicted RBP7.42□□□□□ -1.22
NEDD9-204ENST00000448183 NOX1Q9Y5S8 564 aa7.42□□□□□ -1.22
NEDD9-204ENST00000448183 EIF3FO00303 357 aaPredicted RBP7.41□□□□□ -1.22
NEDD9-204ENST00000448183 E2F3O00716 465 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 SC5DO75845 299 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 TYRP1P17643 537 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 CD34P28906 385 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 RIDAP52758 137 aaKnown RBP7.41□□□□□ -1.22
NEDD9-204ENST00000448183 CRHR2Q13324 411 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 DHCR24Q15392 516 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 TMEM35AQ53FP2 167 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 OR52E8Q6IFG1 317 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 RANBP10Q6VN20 620 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 WDR53Q7Z5U6 358 aaPredicted RBP7.41□□□□□ -1.22
NEDD9-204ENST00000448183 NOXA1Q86UR1 476 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 LAS2Q8IYD9 372 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 ADGRG5Q8IZF4 528 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 ARL14Q8N4G2 192 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 NDNFQ8TB73 568 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 WDR20Q8TBZ3 569 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 IRF7Q92985 503 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 ECHDC3Q96DC8 303 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 OR5B12Q96R08 314 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 SLC30A3Q99726 388 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 KCNK12Q9HB15 430 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 HRASLS2Q9NWW9 162 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 SERTAD3Q9UJW9 196 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 NALCNQ8IZF0 1738 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 CPED1A4D0V7 1026 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 VEGFDO43915 354 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 GJB5O95377 273 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 GSRP00390 522 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 KLK3P07288 261 aaPredicted RBP7.41□□□□□ -1.22
NEDD9-204ENST00000448183 ACRP10323 421 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 ADRB3P13945 408 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 CCNOP22674 350 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 CDKN2CP42773 168 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 PTH2RP49190 550 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 ZNF33BQ06732 778 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 ZNF252P-AS1Q0IIN9 211 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 TEAD2Q15562 447 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 MICAQ29983 383 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 GTDC1Q4AE62 458 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 DEFB134Q4QY38 66 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 PAGE3Q5JUK9 113 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 ELP2Q6IA86 826 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 TMEM107Q6UX40 140 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 ERN2Q76MJ5 926 aaKnown RBP7.41□□□□□ -1.22
NEDD9-204ENST00000448183 P4HA3Q7Z4N8 544 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 SPARTQ8N0X7 666 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 NPWQ8N729 165 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 OR14K1Q8NGZ2 314 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 BRI3BPQ8WY22 251 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 ARNTL2Q8WYA1 636 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 TMEM121BQ9BXQ6 578 aaPredicted RBP7.41□□□□□ -1.22
NEDD9-204ENST00000448183 IGSF5Q9NSI5 407 aa7.41□□□□□ -1.22
NEDD9-204ENST00000448183 INSL6Q9Y581 213 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms