RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 ALG2Q9H553 416 aa18.22■□□□□ 0.51
SGCE-207ENST00000447873 BCAP29Q9UHQ4 241 aa18.22■□□□□ 0.51
SGCE-207ENST00000447873 ERVK-19Q9WJR5 959 aa18.22■□□□□ 0.51
SGCE-207ENST00000447873 SPTBN2O15020 2390 aa18.22■□□□□ 0.51
SGCE-207ENST00000447873 PRORSD1PA6NEY8 169 aa18.21■□□□□ 0.51
SGCE-207ENST00000447873 TRABD2BA6NFA1 517 aa18.21■□□□□ 0.51
SGCE-207ENST00000447873 HRKO00198 91 aa18.21■□□□□ 0.51
SGCE-207ENST00000447873 PDE5AO76074 875 aa18.21■□□□□ 0.51
SGCE-207ENST00000447873 HMGN2P05204 90 aaKnown RBP18.21■□□□□ 0.51
SGCE-207ENST00000447873 UMODP07911 640 aa18.21■□□□□ 0.51
SGCE-207ENST00000447873 EEFSECP57772 596 aaKnown RBP18.21■□□□□ 0.51
SGCE-207ENST00000447873 RPS26P62854 115 aaKnown RBP18.21■□□□□ 0.51
SGCE-207ENST00000447873 FADDQ13158 208 aa18.21■□□□□ 0.51
SGCE-207ENST00000447873 CEACAM7Q14002 265 aa18.21■□□□□ 0.51
SGCE-207ENST00000447873 FBXW8Q8N3Y1 598 aa18.21■□□□□ 0.51
SGCE-207ENST00000447873 SIMC1Q8NDZ2 872 aa18.21■□□□□ 0.51
SGCE-207ENST00000447873 NKD1Q969G9 470 aa18.21■□□□□ 0.51
SGCE-207ENST00000447873 SENP5Q96HI0 755 aaPredicted RBP18.21■□□□□ 0.51
SGCE-207ENST00000447873 MS4A4EQ96PG1 132 aa18.21■□□□□ 0.51
SGCE-207ENST00000447873 RAB3IPQ96QF0 476 aaPredicted RBP18.21■□□□□ 0.51
SGCE-207ENST00000447873 FAM117AQ9C073 453 aa18.21■□□□□ 0.51
SGCE-207ENST00000447873 PIF1Q9H611 641 aa18.21■□□□□ 0.51
SGCE-207ENST00000447873 EQTNQ9NQ60 294 aa18.21■□□□□ 0.51
SGCE-207ENST00000447873 GPATCH2Q9NW75 528 aa18.21■□□□□ 0.51
SGCE-207ENST00000447873 ZNF639Q9UID6 485 aa18.21■□□□□ 0.51
SGCE-207ENST00000447873 FAF1Q9UNN5 650 aaPredicted RBP18.21■□□□□ 0.51
SGCE-207ENST00000447873 IGHV3-20A0A0C4DH32 117 aa18.21■□□□□ 0.51
SGCE-207ENST00000447873 CFAP73A6NFT4 308 aa18.21■□□□□ 0.51
SGCE-207ENST00000447873 DNAJA2O60884 412 aa18.21■□□□□ 0.51
SGCE-207ENST00000447873 BCAS2O75934 225 aaPredicted RBP18.21■□□□□ 0.51
SGCE-207ENST00000447873 CBX7O95931 251 aa18.21■□□□□ 0.51
SGCE-207ENST00000447873 IGHEP01854 428 aa18.21■□□□□ 0.51
SGCE-207ENST00000447873 NQO1P15559 274 aaKnown RBP18.21■□□□□ 0.51
SGCE-207ENST00000447873 TCN1P20061 433 aaPredicted RBP18.21■□□□□ 0.51
SGCE-207ENST00000447873 S1PR1P21453 382 aa18.21■□□□□ 0.51
SGCE-207ENST00000447873 SSTR4P31391 388 aa18.21■□□□□ 0.51
SGCE-207ENST00000447873 MVDP53602 400 aa18.21■□□□□ 0.51
SGCE-207ENST00000447873 RPS18P62269 152 aaKnown RBP18.21■□□□□ 0.51
SGCE-207ENST00000447873 FUT7Q11130 342 aa18.21■□□□□ 0.51
SGCE-207ENST00000447873 LASP1Q14847 261 aaKnown RBP18.21■□□□□ 0.51
SGCE-207ENST00000447873 CYP51A1Q16850 503 aa18.21■□□□□ 0.51
SGCE-207ENST00000447873 SPATS1Q496A3 300 aa18.21■□□□□ 0.51
SGCE-207ENST00000447873 COX20Q5RI15 118 aa18.21■□□□□ 0.51
SGCE-207ENST00000447873 CPEB2Q7Z5Q1 589 aaKnown RBP18.21■□□□□ 0.51
SGCE-207ENST00000447873 SERPINA11Q86U17 422 aa18.21■□□□□ 0.51
SGCE-207ENST00000447873 DTX1Q86Y01 620 aa18.21■□□□□ 0.51
SGCE-207ENST00000447873 OR52R1Q8NGF1 315 aa18.21■□□□□ 0.51
SGCE-207ENST00000447873 FBXL20Q96IG2 436 aa18.21■□□□□ 0.51
SGCE-207ENST00000447873 ART5Q96L15 291 aa18.21■□□□□ 0.51
SGCE-207ENST00000447873 OR8D2Q9GZM6 311 aa18.21■□□□□ 0.51
SGCE-207ENST00000447873 CD300AQ9UGN4 299 aa18.21■□□□□ 0.51
SGCE-207ENST00000447873 LOC101059948A0A1B0GTJ6 334 aa18.2■□□□□ 0.5
SGCE-207ENST00000447873 PCDH17O14917 1159 aa18.2■□□□□ 0.5
SGCE-207ENST00000447873 COQ9O75208 318 aa18.2■□□□□ 0.5
SGCE-207ENST00000447873 MATN1P21941 496 aa18.2■□□□□ 0.5
SGCE-207ENST00000447873 ME2P23368 584 aa18.2■□□□□ 0.5
SGCE-207ENST00000447873 GSK3BP49841 420 aa18.2■□□□□ 0.5
SGCE-207ENST00000447873 GPR155Q7Z3F1 870 aa18.2■□□□□ 0.5
SGCE-207ENST00000447873 HPS6Q86YV9 775 aa18.2■□□□□ 0.5
SGCE-207ENST00000447873 C10orf111Q8N326 155 aa18.2■□□□□ 0.5
SGCE-207ENST00000447873 OR7G1Q8NGA0 311 aa18.2■□□□□ 0.5
SGCE-207ENST00000447873 SLC2A12Q8TD20 617 aa18.2■□□□□ 0.5
SGCE-207ENST00000447873 UTP4Q969X6 686 aaKnown RBP18.2■□□□□ 0.5
SGCE-207ENST00000447873 C8orf44Q96CB5 159 aa18.2■□□□□ 0.5
SGCE-207ENST00000447873 C16orf58Q96GQ5 468 aa18.2■□□□□ 0.5
SGCE-207ENST00000447873 ZNF583Q96ND8 569 aa18.2■□□□□ 0.5
SGCE-207ENST00000447873 LPAR4Q99677 370 aa18.2■□□□□ 0.5
SGCE-207ENST00000447873 KCTD14Q9BQ13 255 aaPredicted RBP18.2■□□□□ 0.5
SGCE-207ENST00000447873 MESP1Q9BRJ9 268 aa18.2■□□□□ 0.5
SGCE-207ENST00000447873 SCNM1Q9BWG6 230 aa18.2■□□□□ 0.5
SGCE-207ENST00000447873 OR10A5Q9H207 317 aa18.2■□□□□ 0.5
SGCE-207ENST00000447873 KCND3Q9UK17 655 aa18.2■□□□□ 0.5
SGCE-207ENST00000447873 DCHS1Q96JQ0 3298 aa18.19■□□□□ 0.5
SGCE-207ENST00000447873 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.19■□□□□ 0.5
SGCE-207ENST00000447873 TERTO14746 1132 aaKnown RBP18.19■□□□□ 0.5
SGCE-207ENST00000447873 PRAMEF2O60811 474 aa18.19■□□□□ 0.5
SGCE-207ENST00000447873 DDAH2O95865 285 aa18.19■□□□□ 0.5
SGCE-207ENST00000447873 LIPCP11150 499 aa18.19■□□□□ 0.5
SGCE-207ENST00000447873 ETFAP13804 333 aa18.19■□□□□ 0.5
SGCE-207ENST00000447873 F8A1P23610 371 aa18.19■□□□□ 0.5
SGCE-207ENST00000447873 MMP11P24347 488 aa18.19■□□□□ 0.5
SGCE-207ENST00000447873 PRIM2P49643 509 aa18.19■□□□□ 0.5
SGCE-207ENST00000447873 ANXA11P50995 505 aaKnown RBP18.19■□□□□ 0.5
SGCE-207ENST00000447873 EEF1A2Q05639 463 aaKnown RBP18.19■□□□□ 0.5
SGCE-207ENST00000447873 MFSD12Q6NUT3 480 aa18.19■□□□□ 0.5
SGCE-207ENST00000447873 TNFAIP8L2Q6P589 184 aaPredicted RBP18.19■□□□□ 0.5
SGCE-207ENST00000447873 PGM2L1Q6PCE3 622 aa18.19■□□□□ 0.5
SGCE-207ENST00000447873 FAM156AQ8NDB6 213 aa18.19■□□□□ 0.5
SGCE-207ENST00000447873 MORN4Q8NDC4 146 aa18.19■□□□□ 0.5
SGCE-207ENST00000447873 OR2T12Q8NG77 320 aa18.19■□□□□ 0.5
SGCE-207ENST00000447873 JADE3Q92613 823 aa18.19■□□□□ 0.5
SGCE-207ENST00000447873 KIAA1143Q96AT1 154 aaPredicted RBP18.19■□□□□ 0.5
SGCE-207ENST00000447873 CCDC124Q96CT7 223 aaKnown RBP18.19■□□□□ 0.5
SGCE-207ENST00000447873 GIMAP5Q96F15 307 aa18.19■□□□□ 0.5
SGCE-207ENST00000447873 YIPF4Q9BSR8 244 aa18.19■□□□□ 0.5
SGCE-207ENST00000447873 ACTRT3Q9BYD9 372 aa18.19■□□□□ 0.5
SGCE-207ENST00000447873 GMPR2Q9P2T1 348 aaKnown RBP18.19■□□□□ 0.5
SGCE-207ENST00000447873 COPS7AQ9UBW8 275 aa18.19■□□□□ 0.5
SGCE-207ENST00000447873 LOC102723996A0A087X1L8 192 aa18.18■□□□□ 0.5
SGCE-207ENST00000447873 SAGE2PA6NJ88 616 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms