RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 S1PR1P21453 382 aa11.02□□□□□ -0.65
RFC4-208ENST00000447345 GPX3P22352 226 aa11.02□□□□□ -0.65
RFC4-208ENST00000447345 NME2P22392 152 aa11.02□□□□□ -0.65
RFC4-208ENST00000447345 MPIP34949 423 aa11.02□□□□□ -0.65
RFC4-208ENST00000447345 SOX18P35713 384 aa11.02□□□□□ -0.65
RFC4-208ENST00000447345 UQCRFS1P47985 274 aa11.02□□□□□ -0.65
RFC4-208ENST00000447345 GPR85P60893 370 aa11.02□□□□□ -0.65
RFC4-208ENST00000447345 OCRLQ01968 901 aa11.02□□□□□ -0.65
RFC4-208ENST00000447345 MAP4K2Q12851 820 aa11.02□□□□□ -0.65
RFC4-208ENST00000447345 SLC25A25Q6KCM7 469 aa11.02□□□□□ -0.65
RFC4-208ENST00000447345 ZNF551Q7Z340 670 aaPredicted RBP11.02□□□□□ -0.65
RFC4-208ENST00000447345 SZRD1Q7Z422 152 aa11.02□□□□□ -0.65
RFC4-208ENST00000447345 ATCAYQ86WG3 371 aa11.02□□□□□ -0.65
RFC4-208ENST00000447345 PRR22Q8IZ63 422 aa11.02□□□□□ -0.65
RFC4-208ENST00000447345 KIRREL3Q8IZU9 778 aa11.02□□□□□ -0.65
RFC4-208ENST00000447345 KRTCAP2Q8N6L1 136 aa11.02□□□□□ -0.65
RFC4-208ENST00000447345 OR7G2Q8NG99 324 aa11.02□□□□□ -0.65
RFC4-208ENST00000447345 OR7G1Q8NGA0 311 aa11.02□□□□□ -0.65
RFC4-208ENST00000447345 OR5M3Q8NGP4 307 aa11.02□□□□□ -0.65
RFC4-208ENST00000447345 ZNF675Q8TD23 568 aa11.02□□□□□ -0.65
RFC4-208ENST00000447345 MAGED4Q96JG8 741 aa11.02□□□□□ -0.65
RFC4-208ENST00000447345 GLIPR2Q9H4G4 154 aa11.02□□□□□ -0.65
RFC4-208ENST00000447345 AGPAT4Q9NRZ5 378 aa11.02□□□□□ -0.65
RFC4-208ENST00000447345 INTS9Q9NV88 658 aaKnown RBP11.02□□□□□ -0.65
RFC4-208ENST00000447345 NOP53Q9NZM5 478 aaKnown RBP11.02□□□□□ -0.65
RFC4-208ENST00000447345 VPS4AQ9UN37 437 aa11.02□□□□□ -0.65
RFC4-208ENST00000447345 WBP11Q9Y2W2 641 aaKnown RBP11.02□□□□□ -0.65
RFC4-208ENST00000447345 FREM3P0C091 2139 aa11.02□□□□□ -0.65
RFC4-208ENST00000447345 A0A0G2JMM0 328 aa11.01□□□□□ -0.65
RFC4-208ENST00000447345 A0A1W2PPB8 328 aa11.01□□□□□ -0.65
RFC4-208ENST00000447345 A0A1W2PRS3 328 aa11.01□□□□□ -0.65
RFC4-208ENST00000447345 KIR3DP1A8MWS1 328 aa11.01□□□□□ -0.65
RFC4-208ENST00000447345 TCP11X1B4DZS4 312 aa11.01□□□□□ -0.65
RFC4-208ENST00000447345 SDHDO14521 159 aa11.01□□□□□ -0.65
RFC4-208ENST00000447345 HDAC3O15379 428 aa11.01□□□□□ -0.65
RFC4-208ENST00000447345 PRPS2P11908 318 aa11.01□□□□□ -0.65
RFC4-208ENST00000447345 GNLYP22749 145 aa11.01□□□□□ -0.65
RFC4-208ENST00000447345 EPHA3P29320 983 aa11.01□□□□□ -0.65
RFC4-208ENST00000447345 GPC1P35052 558 aa11.01□□□□□ -0.65
RFC4-208ENST00000447345 RFC3P40938 356 aa11.01□□□□□ -0.65
RFC4-208ENST00000447345 DIO3P55073 304 aa11.01□□□□□ -0.65
RFC4-208ENST00000447345 EMX2Q04743 252 aa11.01□□□□□ -0.65
RFC4-208ENST00000447345 ZNF155Q12901 538 aaPredicted RBP11.01□□□□□ -0.65
RFC4-208ENST00000447345 MAD2L1Q13257 205 aaPredicted RBP11.01□□□□□ -0.65
RFC4-208ENST00000447345 MRPL49Q13405 166 aaKnown RBP11.01□□□□□ -0.65
RFC4-208ENST00000447345 PDE7AQ13946 482 aa11.01□□□□□ -0.65
RFC4-208ENST00000447345 CEBPEQ15744 281 aa11.01□□□□□ -0.65
RFC4-208ENST00000447345 INAQ16352 499 aa11.01□□□□□ -0.65
RFC4-208ENST00000447345 MPEG1Q2M385 716 aa11.01□□□□□ -0.65
RFC4-208ENST00000447345 PIGGQ5H8A4 983 aa11.01□□□□□ -0.65
RFC4-208ENST00000447345 RPUSD3Q6P087 351 aaKnown RBP11.01□□□□□ -0.65
RFC4-208ENST00000447345 OPN5Q6U736 354 aa11.01□□□□□ -0.65
RFC4-208ENST00000447345 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.01□□□□□ -0.65
RFC4-208ENST00000447345 WDR75Q8IWA0 830 aaKnown RBP11.01□□□□□ -0.65
RFC4-208ENST00000447345 CPSF7Q8N684 471 aaKnown RBP11.01□□□□□ -0.65
RFC4-208ENST00000447345 PSD4Q8NDX1 1056 aa11.01□□□□□ -0.65
RFC4-208ENST00000447345 FAM13CQ8NE31 585 aa11.01□□□□□ -0.65
RFC4-208ENST00000447345 OR7A2PQ8NGA2 310 aa11.01□□□□□ -0.65
RFC4-208ENST00000447345 CTHRC1Q96CG8 243 aa11.01□□□□□ -0.65
RFC4-208ENST00000447345 AMDHD1Q96NU7 426 aa11.01□□□□□ -0.65
RFC4-208ENST00000447345 NXF5Q9H1B4 397 aaKnown RBP11.01□□□□□ -0.65
RFC4-208ENST00000447345 TSPAN10Q9H1Z9 355 aaPredicted RBP11.01□□□□□ -0.65
RFC4-208ENST00000447345 WDR55Q9H6Y2 383 aaPredicted RBP11.01□□□□□ -0.65
RFC4-208ENST00000447345 TRIM45Q9H8W5 580 aaPredicted RBP11.01□□□□□ -0.65
RFC4-208ENST00000447345 MEAF6Q9HAF1 191 aa11.01□□□□□ -0.65
RFC4-208ENST00000447345 SLCO1B3Q9NPD5 702 aa11.01□□□□□ -0.65
RFC4-208ENST00000447345 TIMMDC1Q9NPL8 285 aa11.01□□□□□ -0.65
RFC4-208ENST00000447345 OLAHQ9NV23 265 aa11.01□□□□□ -0.65
RFC4-208ENST00000447345 ZNF639Q9UID6 485 aa11.01□□□□□ -0.65
RFC4-208ENST00000447345 FLNCQ14315 2725 aa11□□□□□ -0.65
RFC4-208ENST00000447345 TRPC5OSA6NMA1 111 aa11□□□□□ -0.65
RFC4-208ENST00000447345 KLF11O14901 512 aa11□□□□□ -0.65
RFC4-208ENST00000447345 CCL3P10147 92 aa11□□□□□ -0.65
RFC4-208ENST00000447345 LBPP18428 481 aa11□□□□□ -0.65
RFC4-208ENST00000447345 MEOX1P50221 254 aa11□□□□□ -0.65
RFC4-208ENST00000447345 CDK9P50750 372 aaKnown RBP11□□□□□ -0.65
RFC4-208ENST00000447345 NME5P56597 212 aa11□□□□□ -0.65
RFC4-208ENST00000447345 FHL5Q5TD97 284 aa11□□□□□ -0.65
RFC4-208ENST00000447345 PRAMEF20Q5VT98 475 aa11□□□□□ -0.65
RFC4-208ENST00000447345 NXNQ6DKJ4 435 aa11□□□□□ -0.65
RFC4-208ENST00000447345 LYPD8Q6UX82 237 aa11□□□□□ -0.65
RFC4-208ENST00000447345 RTL4Q6ZR62 310 aa11□□□□□ -0.65
RFC4-208ENST00000447345 FAM47EQ6ZV65 393 aa11□□□□□ -0.65
RFC4-208ENST00000447345 MAVSQ7Z434 540 aa11□□□□□ -0.65
RFC4-208ENST00000447345 R3HCC1LQ7Z5L2 792 aaKnown RBP11□□□□□ -0.65
RFC4-208ENST00000447345 WDR53Q7Z5U6 358 aaPredicted RBP11□□□□□ -0.65
RFC4-208ENST00000447345 GPALPP1Q8IXQ4 340 aa11□□□□□ -0.65
RFC4-208ENST00000447345 TAGAPQ8N103 731 aa11□□□□□ -0.65
RFC4-208ENST00000447345 BCORP1Q8N888 145 aa11□□□□□ -0.65
RFC4-208ENST00000447345 ZNF441Q8N8Z8 693 aa11□□□□□ -0.65
RFC4-208ENST00000447345 FAM98AQ8NCA5 519 aaKnown RBP11□□□□□ -0.65
RFC4-208ENST00000447345 OR10G3Q8NGC4 313 aa11□□□□□ -0.65
RFC4-208ENST00000447345 ZFP28Q8NHY6 868 aa11□□□□□ -0.65
RFC4-208ENST00000447345 PIWIL2Q8TC59 973 aaKnown RBP11□□□□□ -0.65
RFC4-208ENST00000447345 FAR1Q8WVX9 515 aa11□□□□□ -0.65
RFC4-208ENST00000447345 ADIPOR1Q96A54 375 aa11□□□□□ -0.65
RFC4-208ENST00000447345 SPACA9Q96E40 222 aaPredicted RBP11□□□□□ -0.65
RFC4-208ENST00000447345 MARK4Q96L34 752 aa11□□□□□ -0.65
RFC4-208ENST00000447345 FRMD6Q96NE9 622 aa11□□□□□ -0.65
RFC4-208ENST00000447345 FOLH1BQ9HBA9 442 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms