RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 PNPLA2Q96AD5 504 aa13.08□□□□□ -0.32
SSBP3-208ENST00000444533 CIDECQ96AQ7 238 aaPredicted RBP13.08□□□□□ -0.32
SSBP3-208ENST00000444533 TESCQ96BS2 214 aa13.08□□□□□ -0.32
SSBP3-208ENST00000444533 CTHRC1Q96CG8 243 aa13.08□□□□□ -0.32
SSBP3-208ENST00000444533 COQ8BQ96D53 544 aa13.08□□□□□ -0.32
SSBP3-208ENST00000444533 MAGED4Q96JG8 741 aa13.08□□□□□ -0.32
SSBP3-208ENST00000444533 OR52B2Q96RD2 323 aa13.08□□□□□ -0.32
SSBP3-208ENST00000444533 NSRP1Q9H0G5 558 aaKnown RBP13.08□□□□□ -0.32
SSBP3-208ENST00000444533 RABEP2Q9H5N1 569 aa13.08□□□□□ -0.32
SSBP3-208ENST00000444533 FGFR1OP2Q9NVK5 253 aa13.08□□□□□ -0.32
SSBP3-208ENST00000444533 PLA2G3Q9NZ20 509 aa13.08□□□□□ -0.32
SSBP3-208ENST00000444533 LRFN1Q9P244 771 aa13.08□□□□□ -0.32
SSBP3-208ENST00000444533 ZNF223Q9UK11 482 aaPredicted RBP13.08□□□□□ -0.32
SSBP3-208ENST00000444533 EXO1Q9UQ84 846 aaKnown RBP13.08□□□□□ -0.32
SSBP3-208ENST00000444533 SNX8Q9Y5X2 465 aa13.08□□□□□ -0.32
SSBP3-208ENST00000444533 ITPR1Q14643 2758 aa13.08□□□□□ -0.32
SSBP3-208ENST00000444533 K7EM74 188 aa13.07□□□□□ -0.32
SSBP3-208ENST00000444533 HRKO00198 91 aa13.07□□□□□ -0.32
SSBP3-208ENST00000444533 ZNF195O14628 629 aa13.07□□□□□ -0.32
SSBP3-208ENST00000444533 PDGFAP04085 211 aa13.07□□□□□ -0.32
SSBP3-208ENST00000444533 IL6P05231 212 aa13.07□□□□□ -0.32
SSBP3-208ENST00000444533 LAMP1P11279 417 aa13.07□□□□□ -0.32
SSBP3-208ENST00000444533 NCF2P19878 526 aaPredicted RBP13.07□□□□□ -0.32
SSBP3-208ENST00000444533 MC3RP41968 323 aa13.07□□□□□ -0.32
SSBP3-208ENST00000444533 HLCSP50747 726 aa13.07□□□□□ -0.32
SSBP3-208ENST00000444533 NR0B1P51843 470 aaKnown RBP13.07□□□□□ -0.32
SSBP3-208ENST00000444533 NME5P56597 212 aa13.07□□□□□ -0.32
SSBP3-208ENST00000444533 C19orf57Q0VDD7 668 aa13.07□□□□□ -0.32
SSBP3-208ENST00000444533 ZNF155Q12901 538 aaPredicted RBP13.07□□□□□ -0.32
SSBP3-208ENST00000444533 TUBA3CQ13748 450 aa13.07□□□□□ -0.32
SSBP3-208ENST00000444533 EXOSC7Q15024 291 aaKnown RBP13.07□□□□□ -0.32
SSBP3-208ENST00000444533 EBPQ15125 230 aaKnown RBP13.07□□□□□ -0.32
SSBP3-208ENST00000444533 OR1C1Q15619 314 aa13.07□□□□□ -0.32
SSBP3-208ENST00000444533 VPS26BQ4G0F5 336 aa13.07□□□□□ -0.32
SSBP3-208ENST00000444533 TUBA3EQ6PEY2 450 aa13.07□□□□□ -0.32
SSBP3-208ENST00000444533 ZNF551Q7Z340 670 aaPredicted RBP13.07□□□□□ -0.32
SSBP3-208ENST00000444533 MAVSQ7Z434 540 aa13.07□□□□□ -0.32
SSBP3-208ENST00000444533 RIMKLAQ8IXN7 391 aa13.07□□□□□ -0.32
SSBP3-208ENST00000444533 C9orf40Q8IXQ3 194 aa13.07□□□□□ -0.32
SSBP3-208ENST00000444533 CYP4Z2PQ8N1L4 340 aa13.07□□□□□ -0.32
SSBP3-208ENST00000444533 ZNF615Q8N8J6 731 aa13.07□□□□□ -0.32
SSBP3-208ENST00000444533 C17orf47Q8NEP4 570 aa13.07□□□□□ -0.32
SSBP3-208ENST00000444533 OR8J2Q8NGG1 315 aa13.07□□□□□ -0.32
SSBP3-208ENST00000444533 MOAP1Q96BY2 351 aa13.07□□□□□ -0.32
SSBP3-208ENST00000444533 ELP4Q96EB1 424 aa13.07□□□□□ -0.32
SSBP3-208ENST00000444533 THOC1Q96FV9 657 aaKnown RBP13.07□□□□□ -0.32
SSBP3-208ENST00000444533 ZBTB20Q9HC78 741 aaPredicted RBP13.07□□□□□ -0.32
SSBP3-208ENST00000444533 TIMMDC1Q9NPL8 285 aa13.07□□□□□ -0.32
SSBP3-208ENST00000444533 ZIM2Q9NZV7 527 aa13.07□□□□□ -0.32
SSBP3-208ENST00000444533 MAP10Q9P2G4 905 aa13.07□□□□□ -0.32
SSBP3-208ENST00000444533 ZNF639Q9UID6 485 aa13.07□□□□□ -0.32
SSBP3-208ENST00000444533 MRTO4Q9UKD2 239 aaKnown RBP13.07□□□□□ -0.32
SSBP3-208ENST00000444533 CACNA1GO43497 2377 aa13.07□□□□□ -0.32
SSBP3-208ENST00000444533 TTC36A6NLP5 189 aa13.06□□□□□ -0.32
SSBP3-208ENST00000444533 TTLL8A6PVC2 850 aa13.06□□□□□ -0.32
SSBP3-208ENST00000444533 RNASET2O00584 256 aaKnown RBP13.06□□□□□ -0.32
SSBP3-208ENST00000444533 ACOX3O15254 700 aa13.06□□□□□ -0.32
SSBP3-208ENST00000444533 EMC8O43402 210 aa13.06□□□□□ -0.32
SSBP3-208ENST00000444533 F10P00742 488 aa13.06□□□□□ -0.32
SSBP3-208ENST00000444533 ABCB1P08183 1280 aaPredicted RBP13.06□□□□□ -0.32
SSBP3-208ENST00000444533 KRT16P08779 473 aa13.06□□□□□ -0.32
SSBP3-208ENST00000444533 ALDOCP09972 364 aaKnown RBP13.06□□□□□ -0.32
SSBP3-208ENST00000444533 TRHRP34981 398 aaPredicted RBP13.06□□□□□ -0.32
SSBP3-208ENST00000444533 PTGER1P34995 402 aa13.06□□□□□ -0.32
SSBP3-208ENST00000444533 SOAT1P35610 550 aa13.06□□□□□ -0.32
SSBP3-208ENST00000444533 CD96P40200 585 aa13.06□□□□□ -0.32
SSBP3-208ENST00000444533 FRKP42685 505 aaPredicted RBP13.06□□□□□ -0.32
SSBP3-208ENST00000444533 TNFSF10P50591 281 aa13.06□□□□□ -0.32
SSBP3-208ENST00000444533 PRKAG1P54619 331 aa13.06□□□□□ -0.32
SSBP3-208ENST00000444533 DUSP2Q05923 314 aa13.06□□□□□ -0.32
SSBP3-208ENST00000444533 FAM174BQ3ZCQ3 159 aa13.06□□□□□ -0.32
SSBP3-208ENST00000444533 SOWAHCQ53LP3 525 aaPredicted RBP13.06□□□□□ -0.32
SSBP3-208ENST00000444533 ZNF385BQ569K4 471 aa13.06□□□□□ -0.32
SSBP3-208ENST00000444533 PIGGQ5H8A4 983 aa13.06□□□□□ -0.32
SSBP3-208ENST00000444533 SLC6A19Q695T7 634 aa13.06□□□□□ -0.32
SSBP3-208ENST00000444533 IL20RBQ6UXL0 311 aa13.06□□□□□ -0.32
SSBP3-208ENST00000444533 Q6ZS92 163 aa13.06□□□□□ -0.32
SSBP3-208ENST00000444533 TRIML2Q8N7C3 387 aa13.06□□□□□ -0.32
SSBP3-208ENST00000444533 RBMXL3Q8N7X1 1067 aaKnown RBP13.06□□□□□ -0.32
SSBP3-208ENST00000444533 OR7G2Q8NG99 324 aa13.06□□□□□ -0.32
SSBP3-208ENST00000444533 HSPBAP1Q96EW2 488 aa13.06□□□□□ -0.32
SSBP3-208ENST00000444533 CHMP6Q96FZ7 201 aa13.06□□□□□ -0.32
SSBP3-208ENST00000444533 LCORQ96JN0 433 aaPredicted RBP13.06□□□□□ -0.32
SSBP3-208ENST00000444533 MARK4Q96L34 752 aa13.06□□□□□ -0.32
SSBP3-208ENST00000444533 SGCZQ96LD1 299 aa13.06□□□□□ -0.32
SSBP3-208ENST00000444533 RASL10BQ96S79 203 aa13.06□□□□□ -0.32
SSBP3-208ENST00000444533 CLMPQ9H6B4 373 aa13.06□□□□□ -0.32
SSBP3-208ENST00000444533 RMND5AQ9H871 391 aa13.06□□□□□ -0.32
SSBP3-208ENST00000444533 LIN28AQ9H9Z2 209 aaKnown RBP13.06□□□□□ -0.32
SSBP3-208ENST00000444533 FAM120CQ9NX05 1096 aaKnown RBP13.06□□□□□ -0.32
SSBP3-208ENST00000444533 ANKRD10Q9NXR5 420 aa13.06□□□□□ -0.32
SSBP3-208ENST00000444533 C19orf53Q9UNZ5 99 aaPredicted RBP13.06□□□□□ -0.32
SSBP3-208ENST00000444533 OR10H1Q9Y4A9 318 aa13.06□□□□□ -0.32
SSBP3-208ENST00000444533 GPR45Q9Y5Y3 372 aa13.06□□□□□ -0.32
SSBP3-208ENST00000444533 DOCK10Q96BY6 2186 aa13.05□□□□□ -0.32
SSBP3-208ENST00000444533 PRSS51A0A1B0GVH4 220 aa13.05□□□□□ -0.32
SSBP3-208ENST00000444533 TP53I11O14683 189 aa13.05□□□□□ -0.32
SSBP3-208ENST00000444533 PRKNO60260 465 aaPredicted RBP13.05□□□□□ -0.32
SSBP3-208ENST00000444533 ERN1O75460 977 aaKnown RBP13.05□□□□□ -0.32
SSBP3-208ENST00000444533 SLC25A12O75746 678 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms