RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 TBCELQ5QJ74 424 aa18.46■□□□□ 0.55
LRCH3-208ENST00000443727 TMEM198Q66K66 360 aa18.46■□□□□ 0.55
LRCH3-208ENST00000443727 ZNF585AQ6P3V2 769 aa18.46■□□□□ 0.55
LRCH3-208ENST00000443727 SH2D5Q6ZV89 423 aa18.46■□□□□ 0.55
LRCH3-208ENST00000443727 MCEMP1Q8IX19 187 aa18.46■□□□□ 0.55
LRCH3-208ENST00000443727 PRR22Q8IZ63 422 aa18.46■□□□□ 0.55
LRCH3-208ENST00000443727 SAMD14Q8IZD0 417 aaPredicted RBP18.46■□□□□ 0.55
LRCH3-208ENST00000443727 C17orf47Q8NEP4 570 aa18.46■□□□□ 0.55
LRCH3-208ENST00000443727 CDC26Q8NHZ8 85 aa18.46■□□□□ 0.55
LRCH3-208ENST00000443727 C16orf78Q8WTQ4 265 aa18.46■□□□□ 0.55
LRCH3-208ENST00000443727 ADIPOR1Q96A54 375 aa18.46■□□□□ 0.55
LRCH3-208ENST00000443727 EXOSC8Q96B26 276 aaKnown RBP18.46■□□□□ 0.55
LRCH3-208ENST00000443727 CNRIP1Q96F85 164 aaPredicted RBP18.46■□□□□ 0.55
LRCH3-208ENST00000443727 EBPLQ9BY08 206 aa18.46■□□□□ 0.55
LRCH3-208ENST00000443727 PNPLA3Q9NST1 481 aa18.46■□□□□ 0.55
LRCH3-208ENST00000443727 HEY2Q9UBP5 337 aa18.46■□□□□ 0.55
LRCH3-208ENST00000443727 CNOT11Q9UKZ1 510 aaKnown RBP18.46■□□□□ 0.55
LRCH3-208ENST00000443727 HRH3Q9Y5N1 445 aa18.46■□□□□ 0.55
LRCH3-208ENST00000443727 TRGV5A0A0B4J1U4 118 aa18.45■□□□□ 0.54
LRCH3-208ENST00000443727 FIGNL2A6NMB9 653 aa18.45■□□□□ 0.54
LRCH3-208ENST00000443727 AQP7O14520 342 aa18.45■□□□□ 0.54
LRCH3-208ENST00000443727 UBFD1O14562 309 aaKnown RBP18.45■□□□□ 0.54
LRCH3-208ENST00000443727 SUSD5O60279 629 aa18.45■□□□□ 0.54
LRCH3-208ENST00000443727 ANXA4P09525 319 aaPredicted RBP18.45■□□□□ 0.54
LRCH3-208ENST00000443727 RFPL3SP0C7P2 107 aa18.45■□□□□ 0.54
LRCH3-208ENST00000443727 MASP1P48740 699 aa18.45■□□□□ 0.54
LRCH3-208ENST00000443727 FOXA1P55317 472 aa18.45■□□□□ 0.54
LRCH3-208ENST00000443727 DNAJB13P59910 316 aa18.45■□□□□ 0.54
LRCH3-208ENST00000443727 RAE1P78406 368 aaKnown RBP18.45■□□□□ 0.54
LRCH3-208ENST00000443727 MGAT2Q10469 447 aa18.45■□□□□ 0.54
LRCH3-208ENST00000443727 CDSNQ15517 529 aa18.45■□□□□ 0.54
LRCH3-208ENST00000443727 LTB4RQ15722 352 aa18.45■□□□□ 0.54
LRCH3-208ENST00000443727 EMC4Q5J8M3 183 aa18.45■□□□□ 0.54
LRCH3-208ENST00000443727 FRMD7Q6ZUT3 714 aa18.45■□□□□ 0.54
LRCH3-208ENST00000443727 PACS2Q86VP3 889 aa18.45■□□□□ 0.54
LRCH3-208ENST00000443727 C4orf33Q8N1A6 199 aa18.45■□□□□ 0.54
LRCH3-208ENST00000443727 LIX1Q8N485 282 aa18.45■□□□□ 0.54
LRCH3-208ENST00000443727 RND1Q92730 232 aa18.45■□□□□ 0.54
LRCH3-208ENST00000443727 SARAFQ96BY9 339 aa18.45■□□□□ 0.54
LRCH3-208ENST00000443727 ZNF597Q96LX8 424 aa18.45■□□□□ 0.54
LRCH3-208ENST00000443727 IQCGQ9H095 443 aaKnown RBP18.45■□□□□ 0.54
LRCH3-208ENST00000443727 NXF5Q9H1B4 397 aaKnown RBP18.45■□□□□ 0.54
LRCH3-208ENST00000443727 ZNF703Q9H7S9 590 aaPredicted RBP18.45■□□□□ 0.54
LRCH3-208ENST00000443727 ALKBH4Q9NXW9 302 aa18.45■□□□□ 0.54
LRCH3-208ENST00000443727 TNFRSF10DQ9UBN6 386 aa18.45■□□□□ 0.54
LRCH3-208ENST00000443727 PRODH2Q9UF12 536 aa18.45■□□□□ 0.54
LRCH3-208ENST00000443727 MID2Q9UJV3 735 aa18.45■□□□□ 0.54
LRCH3-208ENST00000443727 DTX4Q9Y2E6 619 aa18.45■□□□□ 0.54
LRCH3-208ENST00000443727 ZNF407Q9C0G0 2248 aa18.45■□□□□ 0.54
LRCH3-208ENST00000443727 A0A1B0GVC2 190 aa18.44■□□□□ 0.54
LRCH3-208ENST00000443727 ANKRD33BA6NCL7 494 aa18.44■□□□□ 0.54
LRCH3-208ENST00000443727 HCN1O60741 890 aa18.44■□□□□ 0.54
LRCH3-208ENST00000443727 PCSK2P16519 638 aa18.44■□□□□ 0.54
LRCH3-208ENST00000443727 ACVR2AP27037 513 aa18.44■□□□□ 0.54
LRCH3-208ENST00000443727 ABCD3P28288 659 aa18.44■□□□□ 0.54
LRCH3-208ENST00000443727 MRPS35P82673 323 aaKnown RBP18.44■□□□□ 0.54
LRCH3-208ENST00000443727 DUSP2Q05923 314 aa18.44■□□□□ 0.54
LRCH3-208ENST00000443727 PMPCAQ10713 525 aa18.44■□□□□ 0.54
LRCH3-208ENST00000443727 TRMT12Q53H54 448 aaKnown RBP18.44■□□□□ 0.54
LRCH3-208ENST00000443727 WLSQ5T9L3 541 aa18.44■□□□□ 0.54
LRCH3-208ENST00000443727 ACAD11Q709F0 780 aa18.44■□□□□ 0.54
LRCH3-208ENST00000443727 CCDC116Q8IYX3 515 aa18.44■□□□□ 0.54
LRCH3-208ENST00000443727 MARVELD2Q8N4S9 558 aa18.44■□□□□ 0.54
LRCH3-208ENST00000443727 OR52R1Q8NGF1 315 aa18.44■□□□□ 0.54
LRCH3-208ENST00000443727 SPPL2AQ8TCT8 520 aa18.44■□□□□ 0.54
LRCH3-208ENST00000443727 ASB5Q8WWX0 329 aa18.44■□□□□ 0.54
LRCH3-208ENST00000443727 ZNF681Q96N22 645 aa18.44■□□□□ 0.54
LRCH3-208ENST00000443727 RILPQ96NA2 401 aa18.44■□□□□ 0.54
LRCH3-208ENST00000443727 SECISBP2Q96T21 854 aaKnown RBP18.44■□□□□ 0.54
LRCH3-208ENST00000443727 ITPAQ9BY32 194 aa18.44■□□□□ 0.54
LRCH3-208ENST00000443727 SHCBP1LQ9BZQ2 653 aa18.44■□□□□ 0.54
LRCH3-208ENST00000443727 C12orf65Q9H3J6 166 aaKnown RBP18.44■□□□□ 0.54
LRCH3-208ENST00000443727 ANKZF1Q9H8Y5 726 aa18.44■□□□□ 0.54
LRCH3-208ENST00000443727 PROK2Q9HC23 129 aa18.44■□□□□ 0.54
LRCH3-208ENST00000443727 OXSMQ9NWU1 459 aa18.44■□□□□ 0.54
LRCH3-208ENST00000443727 SENP1Q9P0U3 644 aa18.44■□□□□ 0.54
LRCH3-208ENST00000443727 PLLPQ9Y342 182 aa18.44■□□□□ 0.54
LRCH3-208ENST00000443727 EML6Q6ZMW3 1958 aa18.43■□□□□ 0.54
LRCH3-208ENST00000443727 SERTM1A2A2V5 107 aa18.43■□□□□ 0.54
LRCH3-208ENST00000443727 LRRC3CA6NJW4 275 aa18.43■□□□□ 0.54
LRCH3-208ENST00000443727 SNX4O95219 450 aa18.43■□□□□ 0.54
LRCH3-208ENST00000443727 PRF1P14222 555 aa18.43■□□□□ 0.54
LRCH3-208ENST00000443727 GDF1P27539 372 aa18.43■□□□□ 0.54
LRCH3-208ENST00000443727 GSTM5P46439 218 aa18.43■□□□□ 0.54
LRCH3-208ENST00000443727 IFFO1Q0D2I5 559 aa18.43■□□□□ 0.54
LRCH3-208ENST00000443727 PLCXD2Q0VAA5 305 aa18.43■□□□□ 0.54
LRCH3-208ENST00000443727 BICRALQ6AI39 1079 aa18.43■□□□□ 0.54
LRCH3-208ENST00000443727 GALNT18Q6P9A2 607 aa18.43■□□□□ 0.54
LRCH3-208ENST00000443727 SRRM1Q8IYB3 904 aaKnown RBP18.43■□□□□ 0.54
LRCH3-208ENST00000443727 OR10Q1Q8NGQ4 319 aa18.43■□□□□ 0.54
LRCH3-208ENST00000443727 OR2W6PQ8NHA6 318 aa18.43■□□□□ 0.54
LRCH3-208ENST00000443727 HSPBAP1Q96EW2 488 aa18.43■□□□□ 0.54
LRCH3-208ENST00000443727 LCORQ96JN0 433 aaPredicted RBP18.43■□□□□ 0.54
LRCH3-208ENST00000443727 METTL7AQ9H8H3 244 aa18.43■□□□□ 0.54
LRCH3-208ENST00000443727 RRAGDQ9NQL2 400 aaPredicted RBP18.43■□□□□ 0.54
LRCH3-208ENST00000443727 QPCTLQ9NXS2 382 aa18.43■□□□□ 0.54
LRCH3-208ENST00000443727 ZNF639Q9UID6 485 aa18.43■□□□□ 0.54
LRCH3-208ENST00000443727 NCOA6Q14686 2063 aaPredicted RBP18.43■□□□□ 0.54
LRCH3-208ENST00000443727 ACOX3O15254 700 aa18.42■□□□□ 0.54
LRCH3-208ENST00000443727 TRIM3O75382 744 aaPredicted RBP18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms