RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 DCDC1P59894 354 aa4.63□□□□□ -1.67
TM9SF3-202ENST00000443638 EIF3EP60228 445 aaKnown RBP4.63□□□□□ -1.67
TM9SF3-202ENST00000443638 HERV-K104P61576 105 aa4.63□□□□□ -1.67
TM9SF3-202ENST00000443638 TRAF2Q12933 501 aa4.63□□□□□ -1.67
TM9SF3-202ENST00000443638 RIGQ13278 110 aa4.63□□□□□ -1.67
TM9SF3-202ENST00000443638 SF3B4Q15427 424 aaKnown RBP eCLIP4.63□□□□□ -1.675e-13■■■■■ 57.6
TM9SF3-202ENST00000443638 KDM7AQ6ZMT4 941 aa4.63□□□□□ -1.67
TM9SF3-202ENST00000443638 Q6ZRG5 221 aa4.63□□□□□ -1.67
TM9SF3-202ENST00000443638 P4HA3Q7Z4N8 544 aa4.63□□□□□ -1.67
TM9SF3-202ENST00000443638 NET1Q7Z628 596 aaPredicted RBP4.63□□□□□ -1.67
TM9SF3-202ENST00000443638 RANBP3LQ86VV4 465 aaPredicted RBP4.63□□□□□ -1.67
TM9SF3-202ENST00000443638 PAQR7Q86WK9 346 aa4.63□□□□□ -1.67
TM9SF3-202ENST00000443638 DND1Q8IYX4 353 aaKnown RBP4.63□□□□□ -1.67
TM9SF3-202ENST00000443638 GPR137CQ8N3F9 429 aa4.63□□□□□ -1.67
TM9SF3-202ENST00000443638 RELL2Q8NC24 303 aaPredicted RBP4.63□□□□□ -1.67
TM9SF3-202ENST00000443638 DNAJA4Q8WW22 397 aaPredicted RBP4.63□□□□□ -1.67
TM9SF3-202ENST00000443638 RAPGEF5Q92565 580 aa4.63□□□□□ -1.67
TM9SF3-202ENST00000443638 AMDHD1Q96NU7 426 aa4.63□□□□□ -1.67
TM9SF3-202ENST00000443638 TGM7Q96PF1 710 aa4.63□□□□□ -1.67
TM9SF3-202ENST00000443638 LPAR4Q99677 370 aa4.63□□□□□ -1.67
TM9SF3-202ENST00000443638 RBM38Q9H0Z9 239 aaKnown RBP4.63□□□□□ -1.67
TM9SF3-202ENST00000443638 GPN2Q9H9Y4 310 aaPredicted RBP4.63□□□□□ -1.67
TM9SF3-202ENST00000443638 EBF2Q9HAK2 575 aa4.63□□□□□ -1.67
TM9SF3-202ENST00000443638 GPR83Q9NYM4 423 aa4.63□□□□□ -1.67
TM9SF3-202ENST00000443638 ELOVL5Q9NYP7 299 aa4.63□□□□□ -1.67
TM9SF3-202ENST00000443638 MBD2Q9UBB5 411 aa4.63□□□□□ -1.67
TM9SF3-202ENST00000443638 POMT2Q9UKY4 750 aa4.63□□□□□ -1.67
TM9SF3-202ENST00000443638 WDR45Q9Y484 360 aa4.63□□□□□ -1.67
TM9SF3-202ENST00000443638 A0A087WUV0 522 aaPredicted RBP4.62□□□□□ -1.67
TM9SF3-202ENST00000443638 TRBV4-1A0A0J9YWV2 114 aa4.62□□□□□ -1.67
TM9SF3-202ENST00000443638 A0A1B0GTQ1 180 aa4.62□□□□□ -1.67
TM9SF3-202ENST00000443638 LINC00854A0A1B0GVQ3 168 aa4.62□□□□□ -1.67
TM9SF3-202ENST00000443638 TTC26A0AVF1 554 aa4.62□□□□□ -1.67
TM9SF3-202ENST00000443638 HEATR9A2RTY3 570 aa4.62□□□□□ -1.67
TM9SF3-202ENST00000443638 RNF113AO15541 343 aaKnown RBP4.62□□□□□ -1.67
TM9SF3-202ENST00000443638 ARHGEF9O43307 516 aa4.62□□□□□ -1.67
TM9SF3-202ENST00000443638 B4GAT1O43505 415 aa4.62□□□□□ -1.67
TM9SF3-202ENST00000443638 KIAA0513O60268 411 aa4.62□□□□□ -1.67
TM9SF3-202ENST00000443638 RAMP2O60895 175 aa4.62□□□□□ -1.67
TM9SF3-202ENST00000443638 RBMXL2O75526 392 aaKnown RBP4.62□□□□□ -1.67
TM9SF3-202ENST00000443638 TSPAN12O95859 305 aa4.62□□□□□ -1.67
TM9SF3-202ENST00000443638 KRT6AP02538 564 aa4.62□□□□□ -1.67
TM9SF3-202ENST00000443638 CRYGBP07316 175 aa4.62□□□□□ -1.67
TM9SF3-202ENST00000443638 CELA2AP08217 269 aa4.62□□□□□ -1.67
TM9SF3-202ENST00000443638 F7P08709 466 aaPredicted RBP4.62□□□□□ -1.67
TM9SF3-202ENST00000443638 OR8G3PP0DMU2 310 aa4.62□□□□□ -1.67
TM9SF3-202ENST00000443638 NF2P35240 595 aa4.62□□□□□ -1.67
TM9SF3-202ENST00000443638 CD151P48509 253 aa4.62□□□□□ -1.67
TM9SF3-202ENST00000443638 CASP4P49662 377 aa4.62□□□□□ -1.67
TM9SF3-202ENST00000443638 AP3M2P53677 418 aa4.62□□□□□ -1.67
TM9SF3-202ENST00000443638 BTG1P62324 171 aa4.62□□□□□ -1.67
TM9SF3-202ENST00000443638 MECOMQ03112 1051 aa4.62□□□□□ -1.67
TM9SF3-202ENST00000443638 SRYQ05066 204 aa4.62□□□□□ -1.67
TM9SF3-202ENST00000443638 MAB21L1Q13394 359 aa4.62□□□□□ -1.67
TM9SF3-202ENST00000443638 ENPP2Q13822 863 aa4.62□□□□□ -1.67
TM9SF3-202ENST00000443638 TFDP1Q14186 410 aa4.62□□□□□ -1.67
TM9SF3-202ENST00000443638 TAF13Q15543 124 aa4.62□□□□□ -1.67
TM9SF3-202ENST00000443638 MAPK6Q16659 721 aa4.62□□□□□ -1.67
TM9SF3-202ENST00000443638 HAGHQ16775 308 aa4.62□□□□□ -1.67
TM9SF3-202ENST00000443638 SPATS1Q496A3 300 aa4.62□□□□□ -1.67
TM9SF3-202ENST00000443638 GGTA1PQ4G0N0 100 aa4.62□□□□□ -1.67
TM9SF3-202ENST00000443638 FGD3Q5JSP0 725 aa4.62□□□□□ -1.67
TM9SF3-202ENST00000443638 SPANXN4Q5MJ08 99 aa4.62□□□□□ -1.67
TM9SF3-202ENST00000443638 CRIP3Q6Q6R5 217 aa4.62□□□□□ -1.67
TM9SF3-202ENST00000443638 DBX2Q6ZNG2 339 aa4.62□□□□□ -1.67
TM9SF3-202ENST00000443638 MRGPRGQ86SM5 289 aa4.62□□□□□ -1.67
TM9SF3-202ENST00000443638 PIGZQ86VD9 579 aa4.62□□□□□ -1.67
TM9SF3-202ENST00000443638 OFCC1Q8IZS5 231 aa4.62□□□□□ -1.67
TM9SF3-202ENST00000443638 KIRREL3Q8IZU9 778 aa4.62□□□□□ -1.67
TM9SF3-202ENST00000443638 ZNF383Q8NA42 475 aa4.62□□□□□ -1.67
TM9SF3-202ENST00000443638 OR1L3Q8NH93 324 aa4.62□□□□□ -1.67
TM9SF3-202ENST00000443638 SLC22A8Q8TCC7 542 aa4.62□□□□□ -1.67
TM9SF3-202ENST00000443638 APOBEC4Q8WW27 367 aaKnown RBP4.62□□□□□ -1.67
TM9SF3-202ENST00000443638 ASB5Q8WWX0 329 aa4.62□□□□□ -1.67
TM9SF3-202ENST00000443638 MRPL24Q96A35 216 aaKnown RBP4.62□□□□□ -1.67
TM9SF3-202ENST00000443638 SH3YL1Q96HL8 342 aaPredicted RBP4.62□□□□□ -1.67
TM9SF3-202ENST00000443638 IL12RB2Q99665 862 aa4.62□□□□□ -1.67
TM9SF3-202ENST00000443638 LRRC1Q9BTT6 524 aa4.62□□□□□ -1.67
TM9SF3-202ENST00000443638 RHOJQ9H4E5 214 aa4.62□□□□□ -1.67
TM9SF3-202ENST00000443638 NEK6Q9HC98 313 aa4.62□□□□□ -1.67
TM9SF3-202ENST00000443638 MED17Q9NVC6 651 aa4.62□□□□□ -1.67
TM9SF3-202ENST00000443638 C1orf123Q9NWV4 160 aa4.62□□□□□ -1.67
TM9SF3-202ENST00000443638 OCIAD1Q9NX40 245 aa4.62□□□□□ -1.67
TM9SF3-202ENST00000443638 PISDQ9UG56 409 aa4.62□□□□□ -1.67
TM9SF3-202ENST00000443638 ZNF639Q9UID6 485 aa4.62□□□□□ -1.67
TM9SF3-202ENST00000443638 IKZF3Q9UKT9 509 aa4.62□□□□□ -1.67
TM9SF3-202ENST00000443638 TNIKQ9UKE5 1360 aa4.62□□□□□ -1.67
TM9SF3-202ENST00000443638 COL11A2P13942 1736 aaPredicted RBP4.61□□□□□ -1.67
TM9SF3-202ENST00000443638 IGLV5-45A0A087WSX0 123 aa4.61□□□□□ -1.67
TM9SF3-202ENST00000443638 H3BMH7 237 aa4.61□□□□□ -1.67
TM9SF3-202ENST00000443638 DUX1O43812 170 aa4.61□□□□□ -1.67
TM9SF3-202ENST00000443638 TIMM8AO60220 97 aaPredicted RBP4.61□□□□□ -1.67
TM9SF3-202ENST00000443638 DNAJB6O75190 326 aa4.61□□□□□ -1.67
TM9SF3-202ENST00000443638 WBP4O75554 376 aaKnown RBP4.61□□□□□ -1.67
TM9SF3-202ENST00000443638 B3GAT3O94766 335 aa4.61□□□□□ -1.67
TM9SF3-202ENST00000443638 NXPH2O95156 264 aa4.61□□□□□ -1.67
TM9SF3-202ENST00000443638 CALCAP01258 141 aa4.61□□□□□ -1.67
TM9SF3-202ENST00000443638 ALPIP09923 528 aa4.61□□□□□ -1.67
TM9SF3-202ENST00000443638 GSTT2P0CG29 244 aa4.61□□□□□ -1.67
TM9SF3-202ENST00000443638 GSTT2BP0CG30 244 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms