RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 NRG3P56975 720 aa13.06□□□□□ -0.32
HMGN1-208ENST00000443046 MGAT5Q09328 741 aa13.06□□□□□ -0.32
HMGN1-208ENST00000443046 SNTA1Q13424 505 aa13.06□□□□□ -0.32
HMGN1-208ENST00000443046 SLC30A6Q6NXT4 461 aa13.06□□□□□ -0.32
HMGN1-208ENST00000443046 ZNF474Q6S9Z5 364 aaPredicted RBP13.06□□□□□ -0.32
HMGN1-208ENST00000443046 SCIMPQ6UWF3 145 aa13.06□□□□□ -0.32
HMGN1-208ENST00000443046 ENPP6Q6UWR7 440 aa13.06□□□□□ -0.32
HMGN1-208ENST00000443046 ANGPTL8Q6UXH0 198 aa13.06□□□□□ -0.32
HMGN1-208ENST00000443046 LRRC70Q7Z2Q7 622 aa13.06□□□□□ -0.32
HMGN1-208ENST00000443046 TRIM42Q8IWZ5 723 aa13.06□□□□□ -0.32
HMGN1-208ENST00000443046 RNF175Q8N4F7 328 aa13.06□□□□□ -0.32
HMGN1-208ENST00000443046 WDSUB1Q8N9V3 476 aa13.06□□□□□ -0.32
HMGN1-208ENST00000443046 SPC24Q8NBT2 197 aa13.06□□□□□ -0.32
HMGN1-208ENST00000443046 UCN3Q969E3 161 aa13.06□□□□□ -0.32
HMGN1-208ENST00000443046 LRRC39Q96DD0 335 aa13.06□□□□□ -0.32
HMGN1-208ENST00000443046 STARD4Q96DR4 205 aa13.06□□□□□ -0.32
HMGN1-208ENST00000443046 HS3ST6Q96QI5 342 aa13.06□□□□□ -0.32
HMGN1-208ENST00000443046 CD244Q9BZW8 370 aa13.06□□□□□ -0.32
HMGN1-208ENST00000443046 OR10A5Q9H207 317 aa13.06□□□□□ -0.32
HMGN1-208ENST00000443046 RHOJQ9H4E5 214 aa13.06□□□□□ -0.32
HMGN1-208ENST00000443046 DDX31Q9H8H2 851 aaKnown RBP13.06□□□□□ -0.32
HMGN1-208ENST00000443046 ZNF701Q9NV72 531 aaPredicted RBP13.06□□□□□ -0.32
HMGN1-208ENST00000443046 KLHL28Q9NXS3 571 aa13.06□□□□□ -0.32
HMGN1-208ENST00000443046 ADGRE2Q9UHX3 823 aa13.06□□□□□ -0.32
HMGN1-208ENST00000443046 EXO1Q9UQ84 846 aaKnown RBP13.06□□□□□ -0.32
HMGN1-208ENST00000443046 WIF1Q9Y5W5 379 aa13.06□□□□□ -0.32
HMGN1-208ENST00000443046 GLOD5A6NK44 160 aa13.05□□□□□ -0.32
HMGN1-208ENST00000443046 TMPRSS11DO60235 418 aa13.05□□□□□ -0.32
HMGN1-208ENST00000443046 CCNT2O60583 730 aaKnown RBP13.05□□□□□ -0.32
HMGN1-208ENST00000443046 ICOSLGO75144 302 aa13.05□□□□□ -0.32
HMGN1-208ENST00000443046 EEDO75530 441 aaKnown RBP13.05□□□□□ -0.32
HMGN1-208ENST00000443046 PPM1BO75688 479 aa13.05□□□□□ -0.32
HMGN1-208ENST00000443046 CBR3O75828 277 aa13.05□□□□□ -0.32
HMGN1-208ENST00000443046 TGM6O95932 706 aa13.05□□□□□ -0.32
HMGN1-208ENST00000443046 CRHP06850 196 aa13.05□□□□□ -0.32
HMGN1-208ENST00000443046 PCNAP12004 261 aa13.05□□□□□ -0.32
HMGN1-208ENST00000443046 ZNF708P17019 499 aa13.05□□□□□ -0.32
HMGN1-208ENST00000443046 S1PR1P21453 382 aa13.05□□□□□ -0.32
HMGN1-208ENST00000443046 CCKARP32238 428 aa13.05□□□□□ -0.32
HMGN1-208ENST00000443046 BSGP35613 385 aa13.05□□□□□ -0.32
HMGN1-208ENST00000443046 UGT2B10P36537 528 aa13.05□□□□□ -0.32
HMGN1-208ENST00000443046 CD79BP40259 229 aa13.05□□□□□ -0.32
HMGN1-208ENST00000443046 PIK3CBP42338 1070 aa13.05□□□□□ -0.32
HMGN1-208ENST00000443046 CLDN18P56856 261 aa13.05□□□□□ -0.32
HMGN1-208ENST00000443046 POU4F1Q01851 419 aa13.05□□□□□ -0.32
HMGN1-208ENST00000443046 SRYQ05066 204 aa13.05□□□□□ -0.32
HMGN1-208ENST00000443046 PPP1R7Q15435 360 aa13.05□□□□□ -0.32
HMGN1-208ENST00000443046 DESI1Q6ICB0 168 aa13.05□□□□□ -0.32
HMGN1-208ENST00000443046 C22orf34Q6ZV56 151 aa13.05□□□□□ -0.32
HMGN1-208ENST00000443046 PHC2Q8IXK0 858 aa13.05□□□□□ -0.32
HMGN1-208ENST00000443046 PRR22Q8IZ63 422 aa13.05□□□□□ -0.32
HMGN1-208ENST00000443046 PDIK1LQ8N165 341 aa13.05□□□□□ -0.32
HMGN1-208ENST00000443046 HUS1BQ8NHY5 278 aa13.05□□□□□ -0.32
HMGN1-208ENST00000443046 UBXN10Q96LJ8 280 aa13.05□□□□□ -0.32
HMGN1-208ENST00000443046 NODALQ96S42 347 aa13.05□□□□□ -0.32
HMGN1-208ENST00000443046 NAP1L3Q99457 506 aaPredicted RBP13.05□□□□□ -0.32
HMGN1-208ENST00000443046 PIGQQ9BRB3 760 aa13.05□□□□□ -0.32
HMGN1-208ENST00000443046 LYARQ9NX58 379 aaKnown RBP13.05□□□□□ -0.32
HMGN1-208ENST00000443046 RNF112Q9ULX5 631 aa13.05□□□□□ -0.32
HMGN1-208ENST00000443046 LRRC14BA6NHZ5 514 aa13.04□□□□□ -0.32
HMGN1-208ENST00000443046 PGRMC1O00264 195 aaKnown RBP13.04□□□□□ -0.32
HMGN1-208ENST00000443046 PLOD2O00469 737 aa13.04□□□□□ -0.32
HMGN1-208ENST00000443046 AIFM1O95831 613 aa13.04□□□□□ -0.32
HMGN1-208ENST00000443046 CCDC166P0CW27 439 aa13.04□□□□□ -0.32
HMGN1-208ENST00000443046 NR2F6P10588 404 aa13.04□□□□□ -0.32
HMGN1-208ENST00000443046 GPX3P22352 226 aa13.04□□□□□ -0.32
HMGN1-208ENST00000443046 GCKP35557 465 aa13.04□□□□□ -0.32
HMGN1-208ENST00000443046 CPOXP36551 454 aa13.04□□□□□ -0.32
HMGN1-208ENST00000443046 STARP49675 285 aa13.04□□□□□ -0.32
HMGN1-208ENST00000443046 ATP6V0D1P61421 351 aa13.04□□□□□ -0.32
HMGN1-208ENST00000443046 RPS13P62277 151 aaKnown RBP13.04□□□□□ -0.32
HMGN1-208ENST00000443046 HLA-DQA1Q5Y7H0 255 aa13.04□□□□□ -0.32
HMGN1-208ENST00000443046 GRHL2Q6ISB3 625 aa13.04□□□□□ -0.32
HMGN1-208ENST00000443046 HEPHL1Q6MZM0 1159 aa13.04□□□□□ -0.32
HMGN1-208ENST00000443046 NUP54Q7Z3B4 507 aa13.04□□□□□ -0.32
HMGN1-208ENST00000443046 GALNT12Q8IXK2 581 aa13.04□□□□□ -0.32
HMGN1-208ENST00000443046 MEIOBQ8N635 442 aa13.04□□□□□ -0.32
HMGN1-208ENST00000443046 OR7G1Q8NGA0 311 aa13.04□□□□□ -0.32
HMGN1-208ENST00000443046 ACTRT1Q8TDG2 376 aa13.04□□□□□ -0.32
HMGN1-208ENST00000443046 MED18Q9BUE0 208 aa13.04□□□□□ -0.32
HMGN1-208ENST00000443046 NXF5Q9H1B4 397 aaKnown RBP13.04□□□□□ -0.32
HMGN1-208ENST00000443046 METTL7AQ9H8H3 244 aa13.04□□□□□ -0.32
HMGN1-208ENST00000443046 GALNT9Q9HCQ5 603 aa13.04□□□□□ -0.32
HMGN1-208ENST00000443046 SERHLQ9NQF3 203 aa13.04□□□□□ -0.32
HMGN1-208ENST00000443046 ELOVL5Q9NYP7 299 aa13.04□□□□□ -0.32
HMGN1-208ENST00000443046 CD274Q9NZQ7 290 aa13.04□□□□□ -0.32
HMGN1-208ENST00000443046 DTX4Q9Y2E6 619 aa13.04□□□□□ -0.32
HMGN1-208ENST00000443046 DLGAP4Q9Y2H0 992 aa13.04□□□□□ -0.32
HMGN1-208ENST00000443046 MTO1Q9Y2Z2 717 aaKnown RBP13.04□□□□□ -0.32
HMGN1-208ENST00000443046 SVEP1Q4LDE5 3571 aa13.04□□□□□ -0.32
HMGN1-208ENST00000443046 C2orf72A6NCS6 295 aa13.03□□□□□ -0.32
HMGN1-208ENST00000443046 PGRMC2O15173 223 aa13.03□□□□□ -0.32
HMGN1-208ENST00000443046 TMCC2O75069 709 aa13.03□□□□□ -0.32
HMGN1-208ENST00000443046 CGAP01215 116 aa13.03□□□□□ -0.32
HMGN1-208ENST00000443046 FAM58BPP0C7Q3 252 aa13.03□□□□□ -0.32
HMGN1-208ENST00000443046 KIR2DL2P43627 348 aaPredicted RBP13.03□□□□□ -0.32
HMGN1-208ENST00000443046 RAP1GDS1P52306 607 aa13.03□□□□□ -0.32
HMGN1-208ENST00000443046 ILF2Q12905 390 aaKnown RBP13.03□□□□□ -0.32
HMGN1-208ENST00000443046 MORF4L2Q15014 288 aa13.03□□□□□ -0.32
HMGN1-208ENST00000443046 VWA1Q6PCB0 445 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms