RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 TMEM41AQ96HV5 264 aa7.15□□□□□ -1.27
CD44-211ENST00000442151 ZFP3Q96NJ6 502 aa7.15□□□□□ -1.27
CD44-211ENST00000442151 ACBD3Q9H3P7 528 aa7.15□□□□□ -1.27
CD44-211ENST00000442151 VPS29Q9UBQ0 182 aa7.15□□□□□ -1.27
CD44-211ENST00000442151 ZNF629Q9UEG4 869 aaPredicted RBP7.15□□□□□ -1.27
CD44-211ENST00000442151 FETUBQ9UGM5 382 aa7.15□□□□□ -1.27
CD44-211ENST00000442151 TRPS1Q9UHF7 1281 aa7.15□□□□□ -1.27
CD44-211ENST00000442151 BCAP29Q9UHQ4 241 aa7.15□□□□□ -1.27
CD44-211ENST00000442151 CNOT11Q9UKZ1 510 aaKnown RBP7.15□□□□□ -1.27
CD44-211ENST00000442151 SLC12A4Q9UP95 1085 aa7.15□□□□□ -1.27
CD44-211ENST00000442151 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.15□□□□□ -1.27
CD44-211ENST00000442151 UNC79Q9P2D8 2635 aa7.15□□□□□ -1.27
CD44-211ENST00000442151 NCOA6Q14686 2063 aaPredicted RBP7.14□□□□□ -1.27
CD44-211ENST00000442151 C15orf38-AP3S2A0A0A6YYH1 394 aa7.14□□□□□ -1.27
CD44-211ENST00000442151 PINLYPA6NC86 204 aa7.14□□□□□ -1.27
CD44-211ENST00000442151 OR7A17O14581 309 aa7.14□□□□□ -1.27
CD44-211ENST00000442151 TMPRSS11DO60235 418 aa7.14□□□□□ -1.27
CD44-211ENST00000442151 ULK1O75385 1050 aa7.14□□□□□ -1.27
CD44-211ENST00000442151 EEDO75530 441 aaKnown RBP7.14□□□□□ -1.27
CD44-211ENST00000442151 SLITRK5O94991 958 aa7.14□□□□□ -1.27
CD44-211ENST00000442151 CPMP14384 443 aa7.14□□□□□ -1.27
CD44-211ENST00000442151 HMOX2P30519 316 aa7.14□□□□□ -1.27
CD44-211ENST00000442151 OPRM1P35372 400 aa7.14□□□□□ -1.27
CD44-211ENST00000442151 TIMP3P35625 211 aa7.14□□□□□ -1.27
CD44-211ENST00000442151 CLK3P49761 638 aaKnown RBP7.14□□□□□ -1.27
CD44-211ENST00000442151 CDK9P50750 372 aaKnown RBP7.14□□□□□ -1.27
CD44-211ENST00000442151 NEK2P51955 445 aa7.14□□□□□ -1.27
CD44-211ENST00000442151 PKNOX1P55347 436 aa7.14□□□□□ -1.27
CD44-211ENST00000442151 IRF9Q00978 393 aa7.14□□□□□ -1.27
CD44-211ENST00000442151 CSTF3Q12996 717 aaKnown RBP7.14□□□□□ -1.27
CD44-211ENST00000442151 EFR3AQ14156 821 aa7.14□□□□□ -1.27
CD44-211ENST00000442151 TOMM20Q15388 145 aa7.14□□□□□ -1.27
CD44-211ENST00000442151 ERCC6LQ2NKX8 1250 aa7.14□□□□□ -1.27
CD44-211ENST00000442151 EMC4Q5J8M3 183 aa7.14□□□□□ -1.27
CD44-211ENST00000442151 LCE1DQ5T752 114 aa7.14□□□□□ -1.27
CD44-211ENST00000442151 ENPP6Q6UWR7 440 aa7.14□□□□□ -1.27
CD44-211ENST00000442151 ARSKQ6UWY0 536 aa7.14□□□□□ -1.27
CD44-211ENST00000442151 CCDC71Q8IV32 467 aaPredicted RBP7.14□□□□□ -1.27
CD44-211ENST00000442151 VWA5B2Q8N398 1253 aa7.14□□□□□ -1.27
CD44-211ENST00000442151 CHDHQ8NE62 594 aaPredicted RBP7.14□□□□□ -1.27
CD44-211ENST00000442151 OR1J4Q8NGS1 313 aa7.14□□□□□ -1.27
CD44-211ENST00000442151 GOT1L1Q8NHS2 421 aaPredicted RBP7.14□□□□□ -1.27
CD44-211ENST00000442151 FAM222BQ8WU58 562 aa7.14□□□□□ -1.27
CD44-211ENST00000442151 NINJ1Q92982 152 aa7.14□□□□□ -1.27
CD44-211ENST00000442151 LCORQ96JN0 433 aaPredicted RBP7.14□□□□□ -1.27
CD44-211ENST00000442151 GPR78Q96P69 363 aa7.14□□□□□ -1.27
CD44-211ENST00000442151 PAFAH2Q99487 392 aa7.14□□□□□ -1.27
CD44-211ENST00000442151 SORBS1Q9BX66 1292 aaKnown RBP7.14□□□□□ -1.27
CD44-211ENST00000442151 C1QTNF3Q9BXJ4 246 aa7.14□□□□□ -1.27
CD44-211ENST00000442151 BRINP2Q9C0B6 783 aa7.14□□□□□ -1.27
CD44-211ENST00000442151 STMN4Q9H169 189 aaPredicted RBP7.14□□□□□ -1.27
CD44-211ENST00000442151 METTL7AQ9H8H3 244 aa7.14□□□□□ -1.27
CD44-211ENST00000442151 CALHM2Q9HA72 323 aa7.14□□□□□ -1.27
CD44-211ENST00000442151 PFDN4Q9NQP4 134 aa7.14□□□□□ -1.27
CD44-211ENST00000442151 SDHAF3Q9NRP4 125 aa7.14□□□□□ -1.27
CD44-211ENST00000442151 XPR1Q9UBH6 696 aa7.14□□□□□ -1.27
CD44-211ENST00000442151 STOML1Q9UBI4 398 aa7.14□□□□□ -1.27
CD44-211ENST00000442151 DCDC2Q9UHG0 476 aa7.14□□□□□ -1.27
CD44-211ENST00000442151 MRTO4Q9UKD2 239 aaKnown RBP7.14□□□□□ -1.27
CD44-211ENST00000442151 PCTPQ9UKL6 214 aa7.14□□□□□ -1.27
CD44-211ENST00000442151 CENPEQ02224 2701 aa7.14□□□□□ -1.27
CD44-211ENST00000442151 EXOC1LA0A1B0GW35 172 aa7.13□□□□□ -1.27
CD44-211ENST00000442151 GLOD5A6NK44 160 aa7.13□□□□□ -1.27
CD44-211ENST00000442151 TTC36A6NLP5 189 aa7.13□□□□□ -1.27
CD44-211ENST00000442151 G3V3Y1 287 aa7.13□□□□□ -1.27
CD44-211ENST00000442151 C19orf84I3L1E1 186 aa7.13□□□□□ -1.27
CD44-211ENST00000442151 TRIM3O75382 744 aaPredicted RBP7.13□□□□□ -1.27
CD44-211ENST00000442151 PPM1BO75688 479 aa7.13□□□□□ -1.27
CD44-211ENST00000442151 CBR3O75828 277 aa7.13□□□□□ -1.27
CD44-211ENST00000442151 SIX3O95343 332 aaPredicted RBP7.13□□□□□ -1.27
CD44-211ENST00000442151 ACSL3O95573 720 aa7.13□□□□□ -1.27
CD44-211ENST00000442151 IL18BPO95998 194 aa7.13□□□□□ -1.27
CD44-211ENST00000442151 ALDOAP04075 364 aaKnown RBP7.13□□□□□ -1.27
CD44-211ENST00000442151 ATP1B1P05026 303 aa7.13□□□□□ -1.27
CD44-211ENST00000442151 HPNP05981 417 aa7.13□□□□□ -1.27
CD44-211ENST00000442151 ENO1P06733 434 aaKnown RBP7.13□□□□□ -1.27
CD44-211ENST00000442151 ABHD2P08910 425 aa7.13□□□□□ -1.27
CD44-211ENST00000442151 IGFBP2P18065 325 aa7.13□□□□□ -1.27
CD44-211ENST00000442151 DRD5P21918 477 aa7.13□□□□□ -1.27
CD44-211ENST00000442151 MPIP34949 423 aa7.13□□□□□ -1.27
CD44-211ENST00000442151 MAGEA12P43365 314 aa7.13□□□□□ -1.27
CD44-211ENST00000442151 KIR2DL3P43628 341 aa7.13□□□□□ -1.27
CD44-211ENST00000442151 PPICP45877 212 aa7.13□□□□□ -1.27
CD44-211ENST00000442151 ASCL1P50553 236 aa7.13□□□□□ -1.27
CD44-211ENST00000442151 SPIN4Q56A73 249 aa7.13□□□□□ -1.27
CD44-211ENST00000442151 SGO1Q5FBB7 561 aa7.13□□□□□ -1.27
CD44-211ENST00000442151 NHSL2Q5HYW2 709 aa7.13□□□□□ -1.27
CD44-211ENST00000442151 PRAMEF20Q5VT98 475 aa7.13□□□□□ -1.27
CD44-211ENST00000442151 SLC48A1Q6P1K1 146 aa7.13□□□□□ -1.27
CD44-211ENST00000442151 LYPD8Q6UX82 237 aa7.13□□□□□ -1.27
CD44-211ENST00000442151 CHMP1BQ7LBR1 199 aa7.13□□□□□ -1.27
CD44-211ENST00000442151 TMEM200AQ86VY9 491 aa7.13□□□□□ -1.27
CD44-211ENST00000442151 ULK2Q8IYT8 1036 aa7.13□□□□□ -1.27
CD44-211ENST00000442151 OR4F6Q8NGB9 312 aa7.13□□□□□ -1.27
CD44-211ENST00000442151 OR10G3Q8NGC4 313 aa7.13□□□□□ -1.27
CD44-211ENST00000442151 ZNF483Q8TF39 744 aaPredicted RBP7.13□□□□□ -1.27
CD44-211ENST00000442151 ZNF592Q92610 1267 aa7.13□□□□□ -1.27
CD44-211ENST00000442151 UCN3Q969E3 161 aa7.13□□□□□ -1.27
CD44-211ENST00000442151 CDC42EP4Q9H3Q1 356 aaKnown RBP7.13□□□□□ -1.27
CD44-211ENST00000442151 ZNF703Q9H7S9 590 aaPredicted RBP7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms