RNA–Protein interactions for RNA: ENST00000441135.1

SMPD4-210, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 699 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-210ENST00000441135 ASB15Q8WXK1 588 aa16.84■□□□□ 0.29
SMPD4-210ENST00000441135 CCDC120Q96HB5 630 aa16.84■□□□□ 0.29
SMPD4-210ENST00000441135 WWTR1Q9GZV5 400 aa16.84■□□□□ 0.29
SMPD4-210ENST00000441135 MIEF1Q9NQG6 463 aa16.84■□□□□ 0.29
SMPD4-210ENST00000441135 HPF1Q9NWY4 346 aa16.84■□□□□ 0.29
SMPD4-210ENST00000441135 MAT2BQ9NZL9 334 aa16.84■□□□□ 0.29
SMPD4-210ENST00000441135 CFL2Q9Y281 166 aa16.84■□□□□ 0.29
SMPD4-210ENST00000441135 CROCCQ5TZA2 2017 aa16.84■□□□□ 0.29
SMPD4-210ENST00000441135 HRKO00198 91 aa16.83■□□□□ 0.28
SMPD4-210ENST00000441135 TFECO14948 347 aaPredicted RBP16.83■□□□□ 0.28
SMPD4-210ENST00000441135 ITM2AO43736 263 aa16.83■□□□□ 0.28
SMPD4-210ENST00000441135 PEX1O43933 1283 aa16.83■□□□□ 0.28
SMPD4-210ENST00000441135 WISP2O76076 250 aa16.83■□□□□ 0.28
SMPD4-210ENST00000441135 SDC1P18827 310 aa16.83■□□□□ 0.28
SMPD4-210ENST00000441135 S1PR1P21453 382 aa16.83■□□□□ 0.28
SMPD4-210ENST00000441135 BGNP21810 368 aa16.83■□□□□ 0.28
SMPD4-210ENST00000441135 FEN1P39748 380 aaKnown RBP16.83■□□□□ 0.28
SMPD4-210ENST00000441135 ASMTP46597 345 aa16.83■□□□□ 0.28
SMPD4-210ENST00000441135 RPL38P63173 70 aaKnown RBP16.83■□□□□ 0.28
SMPD4-210ENST00000441135 C2orf80Q0P641 193 aa16.83■□□□□ 0.28
SMPD4-210ENST00000441135 MGAT2Q10469 447 aa16.83■□□□□ 0.28
SMPD4-210ENST00000441135 ATP6AP1LQ52LC2 224 aa16.83■□□□□ 0.28
SMPD4-210ENST00000441135 RFTN2Q52LD8 501 aaPredicted RBP16.83■□□□□ 0.28
SMPD4-210ENST00000441135 RNFT1Q5M7Z0 435 aa16.83■□□□□ 0.28
SMPD4-210ENST00000441135 ZNF787Q6DD87 383 aa16.83■□□□□ 0.28
SMPD4-210ENST00000441135 BNC2Q6ZN30 1099 aaPredicted RBP16.83■□□□□ 0.28
SMPD4-210ENST00000441135 SULF2Q8IWU5 870 aa16.83■□□□□ 0.28
SMPD4-210ENST00000441135 LRRC34Q8IZ02 419 aa16.83■□□□□ 0.28
SMPD4-210ENST00000441135 ZNF615Q8N8J6 731 aa16.83■□□□□ 0.28
SMPD4-210ENST00000441135 ZNF441Q8N8Z8 693 aa16.83■□□□□ 0.28
SMPD4-210ENST00000441135 ZFP62Q8NB50 900 aaPredicted RBP16.83■□□□□ 0.28
SMPD4-210ENST00000441135 SLC22A8Q8TCC7 542 aa16.83■□□□□ 0.28
SMPD4-210ENST00000441135 AGR3Q8TD06 166 aa16.83■□□□□ 0.28
SMPD4-210ENST00000441135 TP53INP1Q96A56 240 aa16.83■□□□□ 0.28
SMPD4-210ENST00000441135 ATP6V1G3Q96LB4 118 aa16.83■□□□□ 0.28
SMPD4-210ENST00000441135 SGCZQ96LD1 299 aa16.83■□□□□ 0.28
SMPD4-210ENST00000441135 SORT1Q99523 831 aa16.83■□□□□ 0.28
SMPD4-210ENST00000441135 SH3BGRL2Q9UJC5 107 aa16.83■□□□□ 0.28
SMPD4-210ENST00000441135 CENPEQ02224 2701 aa16.83■□□□□ 0.28
SMPD4-210ENST00000441135 TEX15Q9BXT5 2789 aa16.82■□□□□ 0.28
SMPD4-210ENST00000441135 WWP2O00308 870 aa16.82■□□□□ 0.28
SMPD4-210ENST00000441135 LYPLA1O75608 230 aaPredicted RBP16.82■□□□□ 0.28
SMPD4-210ENST00000441135 BCAS2O75934 225 aaPredicted RBP16.82■□□□□ 0.28
SMPD4-210ENST00000441135 CT62P0C5K7 136 aa16.82■□□□□ 0.28
SMPD4-210ENST00000441135 ABOP16442 354 aa16.82■□□□□ 0.28
SMPD4-210ENST00000441135 DDX5P17844 614 aaKnown RBP16.82■□□□□ 0.28
SMPD4-210ENST00000441135 MPIP34949 423 aa16.82■□□□□ 0.28
SMPD4-210ENST00000441135 RPL14P50914 215 aaKnown RBP16.82■□□□□ 0.28
SMPD4-210ENST00000441135 BST1Q10588 318 aa16.82■□□□□ 0.28
SMPD4-210ENST00000441135 ART3Q13508 389 aa16.82■□□□□ 0.28
SMPD4-210ENST00000441135 C3AR1Q16581 482 aa16.82■□□□□ 0.28
SMPD4-210ENST00000441135 ZNF750Q32MQ0 723 aa16.82■□□□□ 0.28
SMPD4-210ENST00000441135 C16orf47Q6ZP98 133 aaPredicted RBP16.82■□□□□ 0.28
SMPD4-210ENST00000441135 MDGA2Q7Z553 956 aa16.82■□□□□ 0.28
SMPD4-210ENST00000441135 TICAM1Q8IUC6 712 aa16.82■□□□□ 0.28
SMPD4-210ENST00000441135 ZNF808Q8N4W9 903 aaPredicted RBP16.82■□□□□ 0.28
SMPD4-210ENST00000441135 ZNF781Q8N8C0 355 aa16.82■□□□□ 0.28
SMPD4-210ENST00000441135 GOLM1Q8NBJ4 401 aa16.82■□□□□ 0.28
SMPD4-210ENST00000441135 PSD4Q8NDX1 1056 aa16.82■□□□□ 0.28
SMPD4-210ENST00000441135 ITLN2Q8WWU7 325 aaPredicted RBP16.82■□□□□ 0.28
SMPD4-210ENST00000441135 ARL8AQ96BM9 186 aa16.82■□□□□ 0.28
SMPD4-210ENST00000441135 MTERF3Q96E29 417 aa16.82■□□□□ 0.28
SMPD4-210ENST00000441135 C20orf27Q9GZN8 174 aa16.82■□□□□ 0.28
SMPD4-210ENST00000441135 OR10A5Q9H207 317 aa16.82■□□□□ 0.28
SMPD4-210ENST00000441135 THAP1Q9NVV9 213 aa16.82■□□□□ 0.28
SMPD4-210ENST00000441135 TINAGQ9UJW2 476 aa16.82■□□□□ 0.28
SMPD4-210ENST00000441135 EXO1Q9UQ84 846 aaKnown RBP16.82■□□□□ 0.28
SMPD4-210ENST00000441135 KLF2Q9Y5W3 355 aaPredicted RBP16.82■□□□□ 0.28
SMPD4-210ENST00000441135 MYO1GB0I1T2 1018 aa16.81■□□□□ 0.28
SMPD4-210ENST00000441135 KLF11O14901 512 aa16.81■□□□□ 0.28
SMPD4-210ENST00000441135 SNNO75324 88 aaPredicted RBP16.81■□□□□ 0.28
SMPD4-210ENST00000441135 OR6B1O95007 311 aa16.81■□□□□ 0.28
SMPD4-210ENST00000441135 ESRRAP11474 423 aaPredicted RBP16.81■□□□□ 0.28
SMPD4-210ENST00000441135 TACR1P25103 407 aa16.81■□□□□ 0.28
SMPD4-210ENST00000441135 SSTR4P31391 388 aa16.81■□□□□ 0.28
SMPD4-210ENST00000441135 SOX18P35713 384 aa16.81■□□□□ 0.28
SMPD4-210ENST00000441135 SOX3P41225 446 aa16.81■□□□□ 0.28
SMPD4-210ENST00000441135 DUSP2Q05923 314 aa16.81■□□□□ 0.28
SMPD4-210ENST00000441135 MAD2L1Q13257 205 aaPredicted RBP16.81■□□□□ 0.28
SMPD4-210ENST00000441135 PDE7AQ13946 482 aa16.81■□□□□ 0.28
SMPD4-210ENST00000441135 ZNF628Q5EBL2 1059 aa16.81■□□□□ 0.28
SMPD4-210ENST00000441135 C6orf136Q5SQH8 315 aa16.81■□□□□ 0.28
SMPD4-210ENST00000441135 ATG16L1Q676U5 607 aa16.81■□□□□ 0.28
SMPD4-210ENST00000441135 RTL4Q6ZR62 310 aa16.81■□□□□ 0.28
SMPD4-210ENST00000441135 MRGPRGQ86SM5 289 aa16.81■□□□□ 0.28
SMPD4-210ENST00000441135 FAM9CQ8IZT9 166 aa16.81■□□□□ 0.28
SMPD4-210ENST00000441135 C16orf52Q8NHV5 167 aa16.81■□□□□ 0.28
SMPD4-210ENST00000441135 EXOSC8Q96B26 276 aaKnown RBP16.81■□□□□ 0.28
SMPD4-210ENST00000441135 ZBTB9Q96C00 473 aa16.81■□□□□ 0.28
SMPD4-210ENST00000441135 PAIP2Q9BPZ3 127 aaKnown RBP16.81■□□□□ 0.28
SMPD4-210ENST00000441135 LIN28AQ9H9Z2 209 aaKnown RBP16.81■□□□□ 0.28
SMPD4-210ENST00000441135 ASIC5Q9NY37 505 aa16.81■□□□□ 0.28
SMPD4-210ENST00000441135 C2orf92A0A1B0GVN3 265 aa16.8■□□□□ 0.28
SMPD4-210ENST00000441135 HMGB1P1B2RPK0 211 aaPredicted RBP16.8■□□□□ 0.28
SMPD4-210ENST00000441135 PLOD3O60568 738 aa16.8■□□□□ 0.28
SMPD4-210ENST00000441135 SKAP2O75563 359 aaPredicted RBP16.8■□□□□ 0.28
SMPD4-210ENST00000441135 NADKO95544 446 aaPredicted RBP16.8■□□□□ 0.28
SMPD4-210ENST00000441135 CBX7O95931 251 aa16.8■□□□□ 0.28
SMPD4-210ENST00000441135 PRPS2P11908 318 aa16.8■□□□□ 0.28
SMPD4-210ENST00000441135 BCKDHAP12694 445 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 127 ms