RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 SYT14Q8NB59 555 aa11.27□□□□□ -0.6
LTBR-203ENST00000441074 HJURPQ8NCD3 748 aaPredicted RBP11.27□□□□□ -0.6
LTBR-203ENST00000441074 OR52I1Q8NGK6 324 aa11.27□□□□□ -0.6
LTBR-203ENST00000441074 PMEPA1Q969W9 287 aa11.27□□□□□ -0.6
LTBR-203ENST00000441074 TM9SF2Q99805 663 aa11.27□□□□□ -0.6
LTBR-203ENST00000441074 ATF6BQ99941 703 aa11.27□□□□□ -0.6
LTBR-203ENST00000441074 RERGLQ9H628 205 aa11.27□□□□□ -0.6
LTBR-203ENST00000441074 TMEM38AQ9H6F2 299 aa11.27□□□□□ -0.6
LTBR-203ENST00000441074 RAB23Q9ULC3 237 aa11.27□□□□□ -0.6
LTBR-203ENST00000441074 YARS2Q9Y2Z4 477 aaKnown RBP11.27□□□□□ -0.6
LTBR-203ENST00000441074 FKBP7Q9Y680 259 aa11.27□□□□□ -0.6
LTBR-203ENST00000441074 LEFTY2O00292 366 aa11.27□□□□□ -0.61
LTBR-203ENST00000441074 OLFM2O95897 454 aa11.27□□□□□ -0.61
LTBR-203ENST00000441074 CHRM5P08912 532 aaPredicted RBP11.27□□□□□ -0.61
LTBR-203ENST00000441074 BPIP17213 487 aa11.27□□□□□ -0.61
LTBR-203ENST00000441074 IDSP22304 550 aa11.27□□□□□ -0.61
LTBR-203ENST00000441074 CLCNKAP51800 687 aa11.27□□□□□ -0.61
LTBR-203ENST00000441074 ATP12AP54707 1039 aa11.27□□□□□ -0.61
LTBR-203ENST00000441074 CAV3P56539 151 aa11.27□□□□□ -0.61
LTBR-203ENST00000441074 WNT4P56705 351 aa11.27□□□□□ -0.61
LTBR-203ENST00000441074 SEMG2Q02383 582 aa11.27□□□□□ -0.61
LTBR-203ENST00000441074 EEF1A2Q05639 463 aaKnown RBP11.27□□□□□ -0.61
LTBR-203ENST00000441074 ACSM2AQ08AH3 577 aa11.27□□□□□ -0.61
LTBR-203ENST00000441074 SP140Q13342 867 aa11.27□□□□□ -0.61
LTBR-203ENST00000441074 LEXMQ3ZCV2 418 aa11.27□□□□□ -0.61
LTBR-203ENST00000441074 ACSM2BQ68CK6 577 aa11.27□□□□□ -0.61
LTBR-203ENST00000441074 MZT2AQ6P582 158 aa11.27□□□□□ -0.61
LTBR-203ENST00000441074 ANGPTL8Q6UXH0 198 aa11.27□□□□□ -0.61
LTBR-203ENST00000441074 WDR53Q7Z5U6 358 aaPredicted RBP11.27□□□□□ -0.61
LTBR-203ENST00000441074 TCEANCQ8N8B7 351 aa11.27□□□□□ -0.61
LTBR-203ENST00000441074 OR52N2Q8NGI0 321 aa11.27□□□□□ -0.61
LTBR-203ENST00000441074 KCND3Q9UK17 655 aa11.27□□□□□ -0.61
LTBR-203ENST00000441074 MGAT4BQ9UQ53 548 aa11.27□□□□□ -0.61
LTBR-203ENST00000441074 STON1Q9Y6Q2 735 aa11.27□□□□□ -0.61
LTBR-203ENST00000441074 RNF215Q9Y6U7 377 aa11.27□□□□□ -0.61
LTBR-203ENST00000441074 TRBC2A0A5B9 178 aa11.26□□□□□ -0.61
LTBR-203ENST00000441074 C7orf66A4D0T2 115 aa11.26□□□□□ -0.61
LTBR-203ENST00000441074 A8MUA0 341 aa11.26□□□□□ -0.61
LTBR-203ENST00000441074 A8MX80 341 aa11.26□□□□□ -0.61
LTBR-203ENST00000441074 SOX1O00570 391 aaPredicted RBP11.26□□□□□ -0.61
LTBR-203ENST00000441074 RNASET2O00584 256 aaKnown RBP11.26□□□□□ -0.61
LTBR-203ENST00000441074 TSPAN4O14817 238 aa11.26□□□□□ -0.61
LTBR-203ENST00000441074 CASKO14936 926 aa11.26□□□□□ -0.61
LTBR-203ENST00000441074 MOSPD3O75425 235 aa11.26□□□□□ -0.61
LTBR-203ENST00000441074 IFNW1P05000 195 aa11.26□□□□□ -0.61
LTBR-203ENST00000441074 RHOP08100 348 aa11.26□□□□□ -0.61
LTBR-203ENST00000441074 STOMP27105 288 aa11.26□□□□□ -0.61
LTBR-203ENST00000441074 CD70P32970 193 aa11.26□□□□□ -0.61
LTBR-203ENST00000441074 CTSOP43234 321 aaPredicted RBP11.26□□□□□ -0.61
LTBR-203ENST00000441074 CSNK1DP48730 415 aa11.26□□□□□ -0.61
LTBR-203ENST00000441074 BCL2L1Q07817 233 aa11.26□□□□□ -0.61
LTBR-203ENST00000441074 ADAM15Q13444 863 aa11.26□□□□□ -0.61
LTBR-203ENST00000441074 EXOSC2Q13868 293 aaKnown RBP11.26□□□□□ -0.61
LTBR-203ENST00000441074 GPR176Q14439 515 aa11.26□□□□□ -0.61
LTBR-203ENST00000441074 CHRNA6Q15825 494 aa11.26□□□□□ -0.61
LTBR-203ENST00000441074 PLA1AQ53H76 456 aa11.26□□□□□ -0.61
LTBR-203ENST00000441074 C3orf38Q5JPI3 329 aa11.26□□□□□ -0.61
LTBR-203ENST00000441074 NDUFAF5Q5TEU4 345 aa11.26□□□□□ -0.61
LTBR-203ENST00000441074 BCDIN3DQ7Z5W3 292 aaKnown RBP11.26□□□□□ -0.61
LTBR-203ENST00000441074 FAM26EQ8N5C1 309 aa11.26□□□□□ -0.61
LTBR-203ENST00000441074 ZNF655Q8N720 491 aaPredicted RBP11.26□□□□□ -0.61
LTBR-203ENST00000441074 OR11H4Q8NGC9 324 aa11.26□□□□□ -0.61
LTBR-203ENST00000441074 GOT1L1Q8NHS2 421 aaPredicted RBP11.26□□□□□ -0.61
LTBR-203ENST00000441074 HUS1BQ8NHY5 278 aa11.26□□□□□ -0.61
LTBR-203ENST00000441074 C11orf24Q96F05 449 aaPredicted RBP11.26□□□□□ -0.61
LTBR-203ENST00000441074 WACQ9BTA9 647 aa11.26□□□□□ -0.61
LTBR-203ENST00000441074 SLC12A9Q9BXP2 914 aa11.26□□□□□ -0.61
LTBR-203ENST00000441074 DNAJC11Q9NVH1 559 aa11.26□□□□□ -0.61
LTBR-203ENST00000441074 SPATA6Q9NWH7 488 aaPredicted RBP11.26□□□□□ -0.61
LTBR-203ENST00000441074 RHCGQ9UBD6 479 aa11.26□□□□□ -0.61
LTBR-203ENST00000441074 TESQ9UGI8 421 aaKnown RBP11.26□□□□□ -0.61
LTBR-203ENST00000441074 UBQLN2Q9UHD9 624 aa11.26□□□□□ -0.61
LTBR-203ENST00000441074 ADAM30Q9UKF2 790 aa11.26□□□□□ -0.61
LTBR-203ENST00000441074 AGAP14A8MT82 685 aa11.26□□□□□ -0.61
LTBR-203ENST00000441074 SLC16A5O15375 505 aa11.26□□□□□ -0.61
LTBR-203ENST00000441074 AKAP8O43823 692 aaKnown RBP11.26□□□□□ -0.61
LTBR-203ENST00000441074 UGDHO60701 494 aa11.26□□□□□ -0.61
LTBR-203ENST00000441074 DHFRP00374 187 aa11.26□□□□□ -0.61
LTBR-203ENST00000441074 IGFBP1P08833 259 aaPredicted RBP11.26□□□□□ -0.61
LTBR-203ENST00000441074 HIST1H2AGP0C0S8 130 aaPredicted RBP11.26□□□□□ -0.61
LTBR-203ENST00000441074 MPC1LP0DKB6 136 aa11.26□□□□□ -0.61
LTBR-203ENST00000441074 NR2F6P10588 404 aa11.26□□□□□ -0.61
LTBR-203ENST00000441074 ANXA3P12429 323 aa11.26□□□□□ -0.61
LTBR-203ENST00000441074 HIST1H2ADP20671 130 aa11.26□□□□□ -0.61
LTBR-203ENST00000441074 GABRA5P31644 462 aa11.26□□□□□ -0.61
LTBR-203ENST00000441074 BDKRB1P46663 353 aa11.26□□□□□ -0.61
LTBR-203ENST00000441074 XKP51811 444 aa11.26□□□□□ -0.61
LTBR-203ENST00000441074 CDK6Q00534 326 aa11.26□□□□□ -0.61
LTBR-203ENST00000441074 CHIT1Q13231 466 aa11.26□□□□□ -0.61
LTBR-203ENST00000441074 CDKN3Q16667 212 aa11.26□□□□□ -0.61
LTBR-203ENST00000441074 SLC25A30Q5SVS4 291 aa11.26□□□□□ -0.61
LTBR-203ENST00000441074 CD200R1LQ6Q8B3 271 aa11.26□□□□□ -0.61
LTBR-203ENST00000441074 ARSKQ6UWY0 536 aa11.26□□□□□ -0.61
LTBR-203ENST00000441074 ZNF852Q6ZMS4 543 aa11.26□□□□□ -0.61
LTBR-203ENST00000441074 UBE2R2Q712K3 238 aaPredicted RBP11.26□□□□□ -0.61
LTBR-203ENST00000441074 BMP8AQ7Z5Y6 402 aa11.26□□□□□ -0.61
LTBR-203ENST00000441074 TMEM25Q86YD3 366 aa11.26□□□□□ -0.61
LTBR-203ENST00000441074 DTX3Q8N9I9 347 aa11.26□□□□□ -0.61
LTBR-203ENST00000441074 SCMH1Q96GD3 660 aa11.26□□□□□ -0.61
LTBR-203ENST00000441074 HIST1H2AHQ96KK5 128 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms