RNA–Protein interactions for RNA: ENST00000439681.1

UBR3-205, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-205ENST00000439681 BTBD10Q9BSF8 475 aa6.97□□□□□ -1.29
UBR3-205ENST00000439681 NUDT9Q9BW91 350 aa6.97□□□□□ -1.29
UBR3-205ENST00000439681 SERHL2Q9H4I8 314 aa6.97□□□□□ -1.29
UBR3-205ENST00000439681 GPN2Q9H9Y4 310 aaPredicted RBP6.97□□□□□ -1.29
UBR3-205ENST00000439681 C3orf14Q9HBI5 128 aa6.97□□□□□ -1.29
UBR3-205ENST00000439681 ZCCHC3Q9NUD5 404 aaKnown RBP6.97□□□□□ -1.29
UBR3-205ENST00000439681 TMEM181Q9P2C4 612 aa6.97□□□□□ -1.29
UBR3-205ENST00000439681 GMPR2Q9P2T1 348 aaKnown RBP6.97□□□□□ -1.29
UBR3-205ENST00000439681 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.97□□□□□ -1.29
UBR3-205ENST00000439681 ERVK-19Q9WJR5 959 aa6.97□□□□□ -1.29
UBR3-205ENST00000439681 CLCA3PQ9Y6N3 262 aa6.97□□□□□ -1.29
UBR3-205ENST00000439681 FER1L5A0AVI2 2057 aa6.97□□□□□ -1.29
UBR3-205ENST00000439681 IGHV1-45A0A0A0MS14 117 aa6.96□□□□□ -1.29
UBR3-205ENST00000439681 SAGE2PA6NJ88 616 aa6.96□□□□□ -1.29
UBR3-205ENST00000439681 GYG2O15488 501 aa6.96□□□□□ -1.29
UBR3-205ENST00000439681 GSC2O15499 205 aa6.96□□□□□ -1.29
UBR3-205ENST00000439681 ABCB7O75027 752 aa6.96□□□□□ -1.29
UBR3-205ENST00000439681 SEC24DO94855 1032 aaPredicted RBP6.96□□□□□ -1.29
UBR3-205ENST00000439681 COX6A1P12074 109 aa6.96□□□□□ -1.29
UBR3-205ENST00000439681 GPX2P18283 190 aa6.96□□□□□ -1.29
UBR3-205ENST00000439681 OTX2P32243 289 aa6.96□□□□□ -1.29
UBR3-205ENST00000439681 MAP3K8P41279 467 aa6.96□□□□□ -1.29
UBR3-205ENST00000439681 MAN2A2P49641 1150 aa6.96□□□□□ -1.29
UBR3-205ENST00000439681 GZMMP51124 257 aa6.96□□□□□ -1.29
UBR3-205ENST00000439681 CASP9P55211 416 aa6.96□□□□□ -1.29
UBR3-205ENST00000439681 SLC37A1P57057 533 aa6.96□□□□□ -1.29
UBR3-205ENST00000439681 MTPNP58546 118 aa6.96□□□□□ -1.29
UBR3-205ENST00000439681 EEF1A2Q05639 463 aaKnown RBP6.96□□□□□ -1.29
UBR3-205ENST00000439681 PAPD4Q6PIY7 484 aaKnown RBP6.96□□□□□ -1.29
UBR3-205ENST00000439681 C16orf89Q6UX73 402 aa6.96□□□□□ -1.29
UBR3-205ENST00000439681 MORN4Q8NDC4 146 aa6.96□□□□□ -1.29
UBR3-205ENST00000439681 OR7G1Q8NGA0 311 aa6.96□□□□□ -1.29
UBR3-205ENST00000439681 OR8J3Q8NGG0 315 aa6.96□□□□□ -1.29
UBR3-205ENST00000439681 OR1N1Q8NGS0 311 aa6.96□□□□□ -1.29
UBR3-205ENST00000439681 OR14A16Q8NHC5 309 aa6.96□□□□□ -1.29
UBR3-205ENST00000439681 PNPT1Q8TCS8 783 aaKnown RBP6.96□□□□□ -1.29
UBR3-205ENST00000439681 HOXB13Q92826 284 aaPredicted RBP6.96□□□□□ -1.29
UBR3-205ENST00000439681 DAZLQ92904 295 aaKnown RBP6.96□□□□□ -1.29
UBR3-205ENST00000439681 NACC2Q96BF6 587 aa6.96□□□□□ -1.29
UBR3-205ENST00000439681 MOAP1Q96BY2 351 aa6.96□□□□□ -1.29
UBR3-205ENST00000439681 CDRT15Q96T59 188 aa6.96□□□□□ -1.29
UBR3-205ENST00000439681 CNPPD1Q9BV87 410 aa6.96□□□□□ -1.29
UBR3-205ENST00000439681 OR10A5Q9H207 317 aa6.96□□□□□ -1.29
UBR3-205ENST00000439681 LRMDAQ9H2I8 198 aa6.96□□□□□ -1.29
UBR3-205ENST00000439681 KAT8Q9H7Z6 458 aaKnown RBP6.96□□□□□ -1.29
UBR3-205ENST00000439681 DDX18Q9NVP1 670 aaKnown RBP6.96□□□□□ -1.29
UBR3-205ENST00000439681 ABCD2Q9UBJ2 740 aa6.96□□□□□ -1.29
UBR3-205ENST00000439681 C19orf25Q9UFG5 118 aaPredicted RBP6.96□□□□□ -1.29
UBR3-205ENST00000439681 ZNF223Q9UK11 482 aaPredicted RBP6.96□□□□□ -1.29
UBR3-205ENST00000439681 SDK2Q58EX2 2172 aa6.96□□□□□ -1.29
UBR3-205ENST00000439681 ERICH4A6NGS2 130 aa6.96□□□□□ -1.3
UBR3-205ENST00000439681 NME4O00746 187 aa6.96□□□□□ -1.3
UBR3-205ENST00000439681 EFSO43281 561 aa6.96□□□□□ -1.3
UBR3-205ENST00000439681 BCAS2O75934 225 aaPredicted RBP6.96□□□□□ -1.3
UBR3-205ENST00000439681 KRT75O95678 551 aa6.96□□□□□ -1.3
UBR3-205ENST00000439681 HMGN2P05204 90 aaKnown RBP6.96□□□□□ -1.3
UBR3-205ENST00000439681 CHI3L1P36222 383 aaPredicted RBP6.96□□□□□ -1.3
UBR3-205ENST00000439681 SLC7A2P52569 658 aa6.96□□□□□ -1.3
UBR3-205ENST00000439681 SLC26A5P58743 744 aa6.96□□□□□ -1.3
UBR3-205ENST00000439681 RPS26P62854 115 aaKnown RBP6.96□□□□□ -1.3
UBR3-205ENST00000439681 PRR5P85299 388 aa6.96□□□□□ -1.3
UBR3-205ENST00000439681 VAC14Q08AM6 782 aa6.96□□□□□ -1.3
UBR3-205ENST00000439681 TP53BP2Q13625 1128 aa6.96□□□□□ -1.3
UBR3-205ENST00000439681 RGNQ15493 299 aa6.96□□□□□ -1.3
UBR3-205ENST00000439681 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.96□□□□□ -1.3
UBR3-205ENST00000439681 MFSD12Q6NUT3 480 aa6.96□□□□□ -1.3
UBR3-205ENST00000439681 NDUFAF7Q7L592 441 aa6.96□□□□□ -1.3
UBR3-205ENST00000439681 CALHM3Q86XJ0 350 aa6.96□□□□□ -1.3
UBR3-205ENST00000439681 RNF130Q86XS8 419 aa6.96□□□□□ -1.3
UBR3-205ENST00000439681 KIF2BQ8N4N8 673 aa6.96□□□□□ -1.3
UBR3-205ENST00000439681 ZSCAN1Q8NBB4 408 aa6.96□□□□□ -1.3
UBR3-205ENST00000439681 APCDD1LQ8NCL9 501 aa6.96□□□□□ -1.3
UBR3-205ENST00000439681 B3GNT7Q8NFL0 401 aa6.96□□□□□ -1.3
UBR3-205ENST00000439681 OR56A1Q8NGH5 318 aa6.96□□□□□ -1.3
UBR3-205ENST00000439681 OR52N2Q8NGI0 321 aa6.96□□□□□ -1.3
UBR3-205ENST00000439681 MIPOL1Q8TD10 442 aa6.96□□□□□ -1.3
UBR3-205ENST00000439681 GATA6Q92908 595 aa6.96□□□□□ -1.3
UBR3-205ENST00000439681 KIAA1143Q96AT1 154 aaPredicted RBP6.96□□□□□ -1.3
UBR3-205ENST00000439681 ZNF583Q96ND8 569 aa6.96□□□□□ -1.3
UBR3-205ENST00000439681 LPAR4Q99677 370 aa6.96□□□□□ -1.3
UBR3-205ENST00000439681 YIPF4Q9BSR8 244 aa6.96□□□□□ -1.3
UBR3-205ENST00000439681 THUMPD3Q9BV44 507 aaKnown RBP6.96□□□□□ -1.3
UBR3-205ENST00000439681 CADM1Q9BY67 442 aaKnown RBP6.96□□□□□ -1.3
UBR3-205ENST00000439681 SEMA4CQ9C0C4 833 aa6.96□□□□□ -1.3
UBR3-205ENST00000439681 OR8D2Q9GZM6 311 aa6.96□□□□□ -1.3
UBR3-205ENST00000439681 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.96□□□□□ -1.3
UBR3-205ENST00000439681 NDE1Q9NXR1 346 aa6.96□□□□□ -1.3
UBR3-205ENST00000439681 DKK4Q9UBT3 224 aa6.96□□□□□ -1.3
UBR3-205ENST00000439681 CD300AQ9UGN4 299 aa6.96□□□□□ -1.3
UBR3-205ENST00000439681 BCAP29Q9UHQ4 241 aa6.96□□□□□ -1.3
UBR3-205ENST00000439681 PACSIN3Q9UKS6 424 aa6.96□□□□□ -1.3
UBR3-205ENST00000439681 DTX4Q9Y2E6 619 aa6.96□□□□□ -1.3
UBR3-205ENST00000439681 SSUH2Q9Y2M2 353 aa6.96□□□□□ -1.3
UBR3-205ENST00000439681 SPTBN2O15020 2390 aa6.95□□□□□ -1.3
UBR3-205ENST00000439681 AKAP13Q12802 2813 aa6.95□□□□□ -1.3
UBR3-205ENST00000439681 MASP2O00187 686 aa6.95□□□□□ -1.3
UBR3-205ENST00000439681 PRKNO60260 465 aaPredicted RBP6.95□□□□□ -1.3
UBR3-205ENST00000439681 TNFRSF21O75509 655 aa6.95□□□□□ -1.3
UBR3-205ENST00000439681 NUDT7P0C024 238 aa6.95□□□□□ -1.3
UBR3-205ENST00000439681 ETFAP13804 333 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms