RNA–Protein interactions for RNA: ENST00000439106.5

PRAME-209, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 891 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-209ENST00000439106 TDRPQ86YL5 185 aa12.72□□□□□ -0.37
PRAME-209ENST00000439106 TAGAPQ8N103 731 aa12.72□□□□□ -0.37
PRAME-209ENST00000439106 C16orf78Q8WTQ4 265 aa12.72□□□□□ -0.37
PRAME-209ENST00000439106 DIO2Q92813 273 aa12.72□□□□□ -0.37
PRAME-209ENST00000439106 ZNF681Q96N22 645 aa12.72□□□□□ -0.37
PRAME-209ENST00000439106 VKORC1Q9BQB6 163 aa12.72□□□□□ -0.37
PRAME-209ENST00000439106 FAIM2Q9BWQ8 316 aa12.72□□□□□ -0.37
PRAME-209ENST00000439106 SLC6A15Q9H2J7 730 aa12.72□□□□□ -0.37
PRAME-209ENST00000439106 NMRK1Q9NWW6 199 aa12.72□□□□□ -0.37
PRAME-209ENST00000439106 STK38LQ9Y2H1 464 aa12.72□□□□□ -0.37
PRAME-209ENST00000439106 PLLPQ9Y342 182 aa12.72□□□□□ -0.37
PRAME-209ENST00000439106 FIS1Q9Y3D6 152 aa12.72□□□□□ -0.37
PRAME-209ENST00000439106 KLF2Q9Y5W3 355 aaPredicted RBP12.72□□□□□ -0.37
PRAME-209ENST00000439106 NPFFR2Q9Y5X5 522 aa12.72□□□□□ -0.37
PRAME-209ENST00000439106 PTGDR2Q9Y5Y4 395 aa12.72□□□□□ -0.37
PRAME-209ENST00000439106 FBN2P35556 2912 aa12.72□□□□□ -0.37
PRAME-209ENST00000439106 POLQO75417 2590 aa12.72□□□□□ -0.37
PRAME-209ENST00000439106 HNRNPRO43390 633 aaKnown RBP12.71□□□□□ -0.37
PRAME-209ENST00000439106 CLDN14O95500 239 aa12.71□□□□□ -0.37
PRAME-209ENST00000439106 IGHG3P01860 377 aa12.71□□□□□ -0.37
PRAME-209ENST00000439106 ATP1B1P05026 303 aa12.71□□□□□ -0.37
PRAME-209ENST00000439106 CSNK2A2P19784 350 aaPredicted RBP12.71□□□□□ -0.37
PRAME-209ENST00000439106 CRHR1P34998 444 aa12.71□□□□□ -0.37
PRAME-209ENST00000439106 TRPC1P48995 793 aa12.71□□□□□ -0.37
PRAME-209ENST00000439106 TRA2BP62995 288 aaKnown RBP12.71□□□□□ -0.37
PRAME-209ENST00000439106 PCLAFQ15004 111 aa12.71□□□□□ -0.37
PRAME-209ENST00000439106 RPS6KA2Q15349 733 aa12.71□□□□□ -0.37
PRAME-209ENST00000439106 ZNF630Q2M218 657 aaPredicted RBP12.71□□□□□ -0.37
PRAME-209ENST00000439106 CCDC153Q494R4 210 aa12.71□□□□□ -0.37
PRAME-209ENST00000439106 SPDYAQ5MJ70 313 aa12.71□□□□□ -0.37
PRAME-209ENST00000439106 CLEC6AQ6EIG7 209 aa12.71□□□□□ -0.37
PRAME-209ENST00000439106 ZNF585AQ6P3V2 769 aa12.71□□□□□ -0.37
PRAME-209ENST00000439106 PAOXQ6QHF9 649 aa12.71□□□□□ -0.37
PRAME-209ENST00000439106 TRILQ7L0X0 811 aa12.71□□□□□ -0.37
PRAME-209ENST00000439106 CCDC116Q8IYX3 515 aa12.71□□□□□ -0.37
PRAME-209ENST00000439106 LRRC25Q8N386 305 aaPredicted RBP12.71□□□□□ -0.37
PRAME-209ENST00000439106 GBP7Q8N8V2 638 aaPredicted RBP12.71□□□□□ -0.37
PRAME-209ENST00000439106 OR52R1Q8NGF1 315 aa12.71□□□□□ -0.37
PRAME-209ENST00000439106 OR9A2Q8NGT5 310 aa12.71□□□□□ -0.37
PRAME-209ENST00000439106 PHF10Q8WUB8 498 aaKnown RBP12.71□□□□□ -0.37
PRAME-209ENST00000439106 KAT2AQ92830 837 aa12.71□□□□□ -0.37
PRAME-209ENST00000439106 DOHHQ9BU89 302 aa12.71□□□□□ -0.37
PRAME-209ENST00000439106 LDAHQ9H6V9 325 aa12.71□□□□□ -0.37
PRAME-209ENST00000439106 EXO5Q9H790 373 aa12.71□□□□□ -0.37
PRAME-209ENST00000439106 SPRR3Q9UBC9 169 aa12.71□□□□□ -0.37
PRAME-209ENST00000439106 ZNF639Q9UID6 485 aa12.71□□□□□ -0.37
PRAME-209ENST00000439106 GRID1Q9ULK0 1009 aa12.71□□□□□ -0.37
PRAME-209ENST00000439106 POLR3HQ9Y535 204 aaPredicted RBP12.71□□□□□ -0.37
PRAME-209ENST00000439106 ADGRG4Q8IZF6 3080 aa12.71□□□□□ -0.38
PRAME-209ENST00000439106 MED12LQ86YW9 2145 aa12.7□□□□□ -0.38
PRAME-209ENST00000439106 FAM90A27PA6NNH2 459 aa12.7□□□□□ -0.38
PRAME-209ENST00000439106 CDH16O75309 829 aa12.7□□□□□ -0.38
PRAME-209ENST00000439106 CRCPO75575 148 aa12.7□□□□□ -0.38
PRAME-209ENST00000439106 CPA3P15088 417 aa12.7□□□□□ -0.38
PRAME-209ENST00000439106 ABCD3P28288 659 aa12.7□□□□□ -0.38
PRAME-209ENST00000439106 CCT5P48643 541 aa12.7□□□□□ -0.38
PRAME-209ENST00000439106 MAN2A2P49641 1150 aa12.7□□□□□ -0.38
PRAME-209ENST00000439106 NUP107P57740 925 aa12.7□□□□□ -0.38
PRAME-209ENST00000439106 SLC18A2Q05940 514 aa12.7□□□□□ -0.38
PRAME-209ENST00000439106 HYAL4Q2M3T9 481 aa12.7□□□□□ -0.38
PRAME-209ENST00000439106 GXYLT1Q4G148 440 aa12.7□□□□□ -0.38
PRAME-209ENST00000439106 SPIN4Q56A73 249 aa12.7□□□□□ -0.38
PRAME-209ENST00000439106 ZNF628Q5EBL2 1059 aa12.7□□□□□ -0.38
PRAME-209ENST00000439106 CFAP157Q5JU67 520 aa12.7□□□□□ -0.38
PRAME-209ENST00000439106 RGS9BPQ6ZS82 235 aa12.7□□□□□ -0.38
PRAME-209ENST00000439106 C10orf107Q8IVU9 208 aa12.7□□□□□ -0.38
PRAME-209ENST00000439106 MCEMP1Q8IX19 187 aa12.7□□□□□ -0.38
PRAME-209ENST00000439106 SRRM1Q8IYB3 904 aaKnown RBP12.7□□□□□ -0.38
PRAME-209ENST00000439106 OR7G1Q8NGA0 311 aa12.7□□□□□ -0.38
PRAME-209ENST00000439106 SPPL2AQ8TCT8 520 aa12.7□□□□□ -0.38
PRAME-209ENST00000439106 TP53INP1Q96A56 240 aa12.7□□□□□ -0.38
PRAME-209ENST00000439106 CCDC126Q96EE4 140 aa12.7□□□□□ -0.38
PRAME-209ENST00000439106 C11orf24Q96F05 449 aaPredicted RBP12.7□□□□□ -0.38
PRAME-209ENST00000439106 RILPQ96NA2 401 aa12.7□□□□□ -0.38
PRAME-209ENST00000439106 TP63Q9H3D4 680 aaPredicted RBP12.7□□□□□ -0.38
PRAME-209ENST00000439106 ZFP64Q9NPA5 681 aa12.7□□□□□ -0.38
PRAME-209ENST00000439106 OXSMQ9NWU1 459 aa12.7□□□□□ -0.38
PRAME-209ENST00000439106 BOKQ9UMX3 212 aaPredicted RBP12.7□□□□□ -0.38
PRAME-209ENST00000439106 ZNF780BQ9Y6R6 833 aa12.7□□□□□ -0.38
PRAME-209ENST00000439106 TRGV5A0A0B4J1U4 118 aa12.69□□□□□ -0.38
PRAME-209ENST00000439106 NKX2-6A6NCS4 301 aa12.69□□□□□ -0.38
PRAME-209ENST00000439106 GNB5O14775 395 aa12.69□□□□□ -0.38
PRAME-209ENST00000439106 SPAG7O75391 227 aa12.69□□□□□ -0.38
PRAME-209ENST00000439106 ANXA4P09525 319 aaPredicted RBP12.69□□□□□ -0.38
PRAME-209ENST00000439106 GDF1P27539 372 aa12.69□□□□□ -0.38
PRAME-209ENST00000439106 KIR3DL1P43629 444 aa12.69□□□□□ -0.38
PRAME-209ENST00000439106 EMDP50402 254 aa12.69□□□□□ -0.38
PRAME-209ENST00000439106 NRG3P56975 720 aa12.69□□□□□ -0.38
PRAME-209ENST00000439106 MAP4K2Q12851 820 aa12.69□□□□□ -0.38
PRAME-209ENST00000439106 SLC10A1Q14973 349 aa12.69□□□□□ -0.38
PRAME-209ENST00000439106 IMPG1Q17R60 797 aa12.69□□□□□ -0.38
PRAME-209ENST00000439106 FNDC7Q5VTL7 733 aa12.69□□□□□ -0.38
PRAME-209ENST00000439106 RTL6Q6ICC9 239 aa12.69□□□□□ -0.38
PRAME-209ENST00000439106 CCDC71Q8IV32 467 aaPredicted RBP12.69□□□□□ -0.38
PRAME-209ENST00000439106 DND1Q8IYX4 353 aaKnown RBP12.69□□□□□ -0.38
PRAME-209ENST00000439106 SLC34A3Q8N130 599 aa12.69□□□□□ -0.38
PRAME-209ENST00000439106 CTHRC1Q96CG8 243 aa12.69□□□□□ -0.38
PRAME-209ENST00000439106 ZNF597Q96LX8 424 aa12.69□□□□□ -0.38
PRAME-209ENST00000439106 NODALQ96S42 347 aa12.69□□□□□ -0.38
PRAME-209ENST00000439106 MECRQ9BV79 373 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms