RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 KIAA0040Q15053 153 aa22.79■■□□□ 1.24
RAPGEF1-206ENST00000438647 RPS6KA2Q15349 733 aa22.79■■□□□ 1.24
RAPGEF1-206ENST00000438647 LTB4RQ15722 352 aa22.79■■□□□ 1.24
RAPGEF1-206ENST00000438647 ZNF628Q5EBL2 1059 aa22.79■■□□□ 1.24
RAPGEF1-206ENST00000438647 SH2D4BQ5SQS7 431 aa22.79■■□□□ 1.24
RAPGEF1-206ENST00000438647 LRIG3Q6UXM1 1119 aa22.79■■□□□ 1.24
RAPGEF1-206ENST00000438647 Q6ZPB1 254 aaPredicted RBP22.79■■□□□ 1.24
RAPGEF1-206ENST00000438647 EXOC3L1Q86VI1 746 aa22.79■■□□□ 1.24
RAPGEF1-206ENST00000438647 TICAM1Q8IUC6 712 aa22.79■■□□□ 1.24
RAPGEF1-206ENST00000438647 NUDCD3Q8IVD9 361 aa22.79■■□□□ 1.24
RAPGEF1-206ENST00000438647 DDIASQ8IXT1 998 aa22.79■■□□□ 1.24
RAPGEF1-206ENST00000438647 FBXW8Q8N3Y1 598 aa22.79■■□□□ 1.24
RAPGEF1-206ENST00000438647 OR10G3Q8NGC4 313 aa22.79■■□□□ 1.24
RAPGEF1-206ENST00000438647 OR52R1Q8NGF1 315 aa22.79■■□□□ 1.24
RAPGEF1-206ENST00000438647 PPP1R14CQ8TAE6 165 aa22.79■■□□□ 1.24
RAPGEF1-206ENST00000438647 PUM2Q8TB72 1066 aaKnown RBP eCLIP22.79■■□□□ 1.24
RAPGEF1-206ENST00000438647 TWIST2Q8WVJ9 160 aa22.79■■□□□ 1.24
RAPGEF1-206ENST00000438647 TTTY12Q9BZ98 90 aa22.79■■□□□ 1.24
RAPGEF1-206ENST00000438647 IL1RL2Q9HB29 575 aa22.79■■□□□ 1.24
RAPGEF1-206ENST00000438647 TAS2R7Q9NYW3 318 aa22.79■■□□□ 1.24
RAPGEF1-206ENST00000438647 PLEKHB1Q9UF11 243 aaPredicted RBP22.79■■□□□ 1.24
RAPGEF1-206ENST00000438647 TMED5Q9Y3A6 229 aa22.79■■□□□ 1.24
RAPGEF1-206ENST00000438647 PTGDR2Q9Y5Y4 395 aa22.79■■□□□ 1.24
RAPGEF1-206ENST00000438647 ACTL7BQ9Y614 415 aa22.79■■□□□ 1.24
RAPGEF1-206ENST00000438647 ICE1Q9Y2F5 2266 aa22.79■■□□□ 1.24
RAPGEF1-206ENST00000438647 CROCCQ5TZA2 2017 aa22.79■■□□□ 1.24
RAPGEF1-206ENST00000438647 A0A0G2JMM0 328 aa22.78■■□□□ 1.24
RAPGEF1-206ENST00000438647 A0A1W2PPB8 328 aa22.78■■□□□ 1.24
RAPGEF1-206ENST00000438647 A0A1W2PRS3 328 aa22.78■■□□□ 1.24
RAPGEF1-206ENST00000438647 PINLYPA6NC86 204 aa22.78■■□□□ 1.24
RAPGEF1-206ENST00000438647 KIR3DP1A8MWS1 328 aa22.78■■□□□ 1.24
RAPGEF1-206ENST00000438647 CDC40O60508 579 aaKnown RBP eCLIP22.78■■□□□ 1.24
RAPGEF1-206ENST00000438647 CBX7O95931 251 aa22.78■■□□□ 1.24
RAPGEF1-206ENST00000438647 LINC00032P0C843 101 aa22.78■■□□□ 1.24
RAPGEF1-206ENST00000438647 PCSK2P16519 638 aa22.78■■□□□ 1.24
RAPGEF1-206ENST00000438647 PTGER1P34995 402 aa22.78■■□□□ 1.24
RAPGEF1-206ENST00000438647 SERPINB4P48594 390 aa22.78■■□□□ 1.24
RAPGEF1-206ENST00000438647 DCAF7P61962 342 aa22.78■■□□□ 1.24
RAPGEF1-206ENST00000438647 RPP38P78345 283 aaKnown RBP22.78■■□□□ 1.24
RAPGEF1-206ENST00000438647 MRPS35P82673 323 aaKnown RBP22.78■■□□□ 1.24
RAPGEF1-206ENST00000438647 TRMT12Q53H54 448 aaKnown RBP22.78■■□□□ 1.24
RAPGEF1-206ENST00000438647 CMPK2Q5EBM0 449 aa22.78■■□□□ 1.24
RAPGEF1-206ENST00000438647 TBCELQ5QJ74 424 aa22.78■■□□□ 1.24
RAPGEF1-206ENST00000438647 Q6ZSR9 355 aa22.78■■□□□ 1.24
RAPGEF1-206ENST00000438647 FAM9CQ8IZT9 166 aa22.78■■□□□ 1.24
RAPGEF1-206ENST00000438647 PGM2Q96G03 612 aa22.78■■□□□ 1.24
RAPGEF1-206ENST00000438647 STMN4Q9H169 189 aaPredicted RBP22.78■■□□□ 1.24
RAPGEF1-206ENST00000438647 TUBB1Q9H4B7 451 aa22.78■■□□□ 1.24
RAPGEF1-206ENST00000438647 SH3BGRL2Q9UJC5 107 aa22.78■■□□□ 1.24
RAPGEF1-206ENST00000438647 BOKQ9UMX3 212 aaPredicted RBP22.78■■□□□ 1.24
RAPGEF1-206ENST00000438647 CHCHD2Q9Y6H1 151 aaPredicted RBP22.78■■□□□ 1.24
RAPGEF1-206ENST00000438647 CCL21O00585 134 aa22.77■■□□□ 1.24
RAPGEF1-206ENST00000438647 PRRG2O14669 202 aa22.77■■□□□ 1.24
RAPGEF1-206ENST00000438647 ACOX3O15254 700 aa22.77■■□□□ 1.24
RAPGEF1-206ENST00000438647 GLSO94925 669 aaPredicted RBP22.77■■□□□ 1.24
RAPGEF1-206ENST00000438647 SLITRK5O94991 958 aa22.77■■□□□ 1.24
RAPGEF1-206ENST00000438647 NTSP30990 170 aa22.77■■□□□ 1.24
RAPGEF1-206ENST00000438647 DNASE1L1P49184 302 aa22.77■■□□□ 1.24
RAPGEF1-206ENST00000438647 KCNJ2P63252 427 aa22.77■■□□□ 1.24
RAPGEF1-206ENST00000438647 ARHGAP11AQ6P4F7 1023 aa22.77■■□□□ 1.24
RAPGEF1-206ENST00000438647 OR9A2Q8NGT5 310 aa22.77■■□□□ 1.24
RAPGEF1-206ENST00000438647 HSPBAP1Q96EW2 488 aa22.77■■□□□ 1.24
RAPGEF1-206ENST00000438647 LCORQ96JN0 433 aaPredicted RBP22.77■■□□□ 1.24
RAPGEF1-206ENST00000438647 SECISBP2Q96T21 854 aaKnown RBP22.77■■□□□ 1.24
RAPGEF1-206ENST00000438647 CCT7Q99832 543 aa22.77■■□□□ 1.24
RAPGEF1-206ENST00000438647 ITPAQ9BY32 194 aa22.77■■□□□ 1.24
RAPGEF1-206ENST00000438647 ZDHHC11Q9H8X9 412 aa22.77■■□□□ 1.24
RAPGEF1-206ENST00000438647 SEC23IPQ9Y6Y8 1000 aaKnown RBP22.77■■□□□ 1.24
RAPGEF1-206ENST00000438647 FAM166BA8MTA8 275 aa22.76■■□□□ 1.23
RAPGEF1-206ENST00000438647 TMEM233B4DJY2 109 aa22.76■■□□□ 1.23
RAPGEF1-206ENST00000438647 LSM1O15116 133 aaKnown RBP22.76■■□□□ 1.23
RAPGEF1-206ENST00000438647 BIRC5O15392 142 aa22.76■■□□□ 1.23
RAPGEF1-206ENST00000438647 ZWINTO95229 277 aa22.76■■□□□ 1.23
RAPGEF1-206ENST00000438647 NAGAP17050 411 aa22.76■■□□□ 1.23
RAPGEF1-206ENST00000438647 PIGAP37287 484 aa22.76■■□□□ 1.23
RAPGEF1-206ENST00000438647 HSF1Q00613 529 aa22.76■■□□□ 1.23
RAPGEF1-206ENST00000438647 C3AR1Q16581 482 aa22.76■■□□□ 1.23
RAPGEF1-206ENST00000438647 HYAL4Q2M3T9 481 aa22.76■■□□□ 1.23
RAPGEF1-206ENST00000438647 UGT3A2Q3SY77 523 aa22.76■■□□□ 1.23
RAPGEF1-206ENST00000438647 TNFAIP8L3Q5GJ75 292 aa22.76■■□□□ 1.23
RAPGEF1-206ENST00000438647 PRAMEF20Q5VT98 475 aa22.76■■□□□ 1.23
RAPGEF1-206ENST00000438647 EID3Q8N140 333 aa22.76■■□□□ 1.23
RAPGEF1-206ENST00000438647 FAM109AQ8N4B1 249 aa22.76■■□□□ 1.23
RAPGEF1-206ENST00000438647 OR52N2Q8NGI0 321 aa22.76■■□□□ 1.23
RAPGEF1-206ENST00000438647 OR5M3Q8NGP4 307 aa22.76■■□□□ 1.23
RAPGEF1-206ENST00000438647 OR6Y1Q8NGX8 325 aa22.76■■□□□ 1.23
RAPGEF1-206ENST00000438647 OR2T11Q8NH01 316 aa22.76■■□□□ 1.23
RAPGEF1-206ENST00000438647 AGR3Q8TD06 166 aa22.76■■□□□ 1.23
RAPGEF1-206ENST00000438647 FCRL1Q96LA6 429 aa22.76■■□□□ 1.23
RAPGEF1-206ENST00000438647 NXF5Q9H1B4 397 aaKnown RBP22.76■■□□□ 1.23
RAPGEF1-206ENST00000438647 PLSCR2Q9NRY7 297 aa22.76■■□□□ 1.23
RAPGEF1-206ENST00000438647 DTX4Q9Y2E6 619 aa22.76■■□□□ 1.23
RAPGEF1-206ENST00000438647 A1L4Q6 167 aa22.75■■□□□ 1.23
RAPGEF1-206ENST00000438647 ANKRD33BA6NCL7 494 aa22.75■■□□□ 1.23
RAPGEF1-206ENST00000438647 MYO1GB0I1T2 1018 aa22.75■■□□□ 1.23
RAPGEF1-206ENST00000438647 PIP5K1BO14986 540 aa22.75■■□□□ 1.23
RAPGEF1-206ENST00000438647 PLOD3O60568 738 aa22.75■■□□□ 1.23
RAPGEF1-206ENST00000438647 ZG16O60844 167 aa22.75■■□□□ 1.23
RAPGEF1-206ENST00000438647 ESRRAP11474 423 aaPredicted RBP22.75■■□□□ 1.23
RAPGEF1-206ENST00000438647 ABCD3P28288 659 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms