RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 HIST2H2AA3Q6FI13 130 aa3.05□□□□□ -1.92
LSM1P1-201ENST00000438629 NEPROQ6NW34 567 aa3.05□□□□□ -1.92
LSM1P1-201ENST00000438629 AFTPHQ6ULP2 937 aa3.05□□□□□ -1.92
LSM1P1-201ENST00000438629 TAF8Q7Z7C8 310 aa3.05□□□□□ -1.92
LSM1P1-201ENST00000438629 LRRC49Q8IUZ0 686 aa3.05□□□□□ -1.92
LSM1P1-201ENST00000438629 KRT222Q8N1A0 295 aa3.05□□□□□ -1.92
LSM1P1-201ENST00000438629 BATF2Q8N1L9 274 aa3.05□□□□□ -1.92
LSM1P1-201ENST00000438629 ZNF781Q8N8C0 355 aa3.05□□□□□ -1.92
LSM1P1-201ENST00000438629 OR52K2Q8NGK3 314 aa3.05□□□□□ -1.92
LSM1P1-201ENST00000438629 SSC4DQ8WTU2 575 aa3.05□□□□□ -1.92
LSM1P1-201ENST00000438629 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.05□□□□□ -1.92
LSM1P1-201ENST00000438629 THRSPQ92748 146 aa3.05□□□□□ -1.92
LSM1P1-201ENST00000438629 GLYATL1Q969I3 302 aa3.05□□□□□ -1.92
LSM1P1-201ENST00000438629 ESAMQ96AP7 390 aa3.05□□□□□ -1.92
LSM1P1-201ENST00000438629 ANKRD9Q96BM1 317 aaPredicted RBP3.05□□□□□ -1.92
LSM1P1-201ENST00000438629 C16orf58Q96GQ5 468 aa3.05□□□□□ -1.92
LSM1P1-201ENST00000438629 PCED1BQ96HM7 432 aa3.05□□□□□ -1.92
LSM1P1-201ENST00000438629 RPGRIP1Q96KN7 1286 aa3.05□□□□□ -1.92
LSM1P1-201ENST00000438629 NSMCE2Q96MF7 247 aa3.05□□□□□ -1.92
LSM1P1-201ENST00000438629 RBM14Q96PK6 669 aaKnown RBP3.05□□□□□ -1.92
LSM1P1-201ENST00000438629 HSD17B14Q9BPX1 270 aa3.05□□□□□ -1.92
LSM1P1-201ENST00000438629 RPP25Q9BUL9 199 aaKnown RBP3.05□□□□□ -1.92
LSM1P1-201ENST00000438629 NTMT1Q9BV86 223 aa3.05□□□□□ -1.92
LSM1P1-201ENST00000438629 TRPV6Q9H1D0 765 aa3.05□□□□□ -1.92
LSM1P1-201ENST00000438629 SLC26A1Q9H2B4 701 aa3.05□□□□□ -1.92
LSM1P1-201ENST00000438629 ELL3Q9HB65 397 aaPredicted RBP3.05□□□□□ -1.92
LSM1P1-201ENST00000438629 SYTL2Q9HCH5 934 aa3.05□□□□□ -1.92
LSM1P1-201ENST00000438629 DDX28Q9NUL7 540 aaKnown RBP3.05□□□□□ -1.92
LSM1P1-201ENST00000438629 DNAJC11Q9NVH1 559 aa3.05□□□□□ -1.92
LSM1P1-201ENST00000438629 UBAP1Q9NZ09 502 aa3.05□□□□□ -1.92
LSM1P1-201ENST00000438629 MRTO4Q9UKD2 239 aaKnown RBP3.05□□□□□ -1.92
LSM1P1-201ENST00000438629 SPATA2Q9UM82 520 aa3.05□□□□□ -1.92
LSM1P1-201ENST00000438629 TRAF3IP3Q9Y228 551 aa3.05□□□□□ -1.92
LSM1P1-201ENST00000438629 CAB39Q9Y376 341 aaPredicted RBP3.05□□□□□ -1.92
LSM1P1-201ENST00000438629 CSAG2Q9Y5P2 127 aa3.05□□□□□ -1.92
LSM1P1-201ENST00000438629 CLCA3PQ9Y6N3 262 aa3.05□□□□□ -1.92
LSM1P1-201ENST00000438629 LOC390937A0A1W2PQ73 354 aa3.04□□□□□ -1.92
LSM1P1-201ENST00000438629 RNF212BA8MTL3 300 aa3.04□□□□□ -1.92
LSM1P1-201ENST00000438629 H0YHG0 523 aa3.04□□□□□ -1.92
LSM1P1-201ENST00000438629 SLC28A1O00337 649 aa3.04□□□□□ -1.92
LSM1P1-201ENST00000438629 VEGFDO43915 354 aa3.04□□□□□ -1.92
LSM1P1-201ENST00000438629 GMFGO60234 142 aa3.04□□□□□ -1.92
LSM1P1-201ENST00000438629 GALR3O60755 368 aaPredicted RBP3.04□□□□□ -1.92
LSM1P1-201ENST00000438629 FRAT2O75474 233 aaPredicted RBP3.04□□□□□ -1.92
LSM1P1-201ENST00000438629 TXNDC12O95881 172 aa3.04□□□□□ -1.92
LSM1P1-201ENST00000438629 MT-ND1P03886 318 aa3.04□□□□□ -1.92
LSM1P1-201ENST00000438629 HOXD4P09016 255 aaPredicted RBP3.04□□□□□ -1.92
LSM1P1-201ENST00000438629 NUDT17P0C025 328 aa3.04□□□□□ -1.92
LSM1P1-201ENST00000438629 TPBGLP0DKB5 382 aa3.04□□□□□ -1.92
LSM1P1-201ENST00000438629 PDHBP11177 359 aa3.04□□□□□ -1.92
LSM1P1-201ENST00000438629 TOP1P11387 765 aaKnown RBP3.04□□□□□ -1.92
LSM1P1-201ENST00000438629 AHCYP23526 432 aa3.04□□□□□ -1.92
LSM1P1-201ENST00000438629 FCARP24071 287 aa3.04□□□□□ -1.92
LSM1P1-201ENST00000438629 PPP2R1BP30154 601 aa3.04□□□□□ -1.92
LSM1P1-201ENST00000438629 ETV5P41161 510 aa3.04□□□□□ -1.92
LSM1P1-201ENST00000438629 CAMLGP49069 296 aa3.04□□□□□ -1.92
LSM1P1-201ENST00000438629 TAF6P49848 677 aa3.04□□□□□ -1.92
LSM1P1-201ENST00000438629 HNMTP50135 292 aa3.04□□□□□ -1.92
LSM1P1-201ENST00000438629 CTAG1AP78358 180 aa3.04□□□□□ -1.92
LSM1P1-201ENST00000438629 CCZ1BP86790 482 aa3.04□□□□□ -1.92
LSM1P1-201ENST00000438629 CCZ1P86791 482 aaPredicted RBP3.04□□□□□ -1.92
LSM1P1-201ENST00000438629 TRDNQ13061 729 aa3.04□□□□□ -1.92
LSM1P1-201ENST00000438629 SCGB2A2Q13296 93 aa3.04□□□□□ -1.92
LSM1P1-201ENST00000438629 RIPK1Q13546 671 aa3.04□□□□□ -1.92
LSM1P1-201ENST00000438629 GK2Q14410 553 aaPredicted RBP3.04□□□□□ -1.92
LSM1P1-201ENST00000438629 SLC17A1Q14916 467 aa3.04□□□□□ -1.92
LSM1P1-201ENST00000438629 PPP1R7Q15435 360 aa3.04□□□□□ -1.92
LSM1P1-201ENST00000438629 HFEQ30201 348 aa3.04□□□□□ -1.92
LSM1P1-201ENST00000438629 CCDC183Q5T5S1 534 aa3.04□□□□□ -1.92
LSM1P1-201ENST00000438629 C9orf66Q5T8R8 295 aa3.04□□□□□ -1.92
LSM1P1-201ENST00000438629 RTL6Q6ICC9 239 aa3.04□□□□□ -1.92
LSM1P1-201ENST00000438629 EMBQ6PCB8 327 aa3.04□□□□□ -1.92
LSM1P1-201ENST00000438629 ANGPTL8Q6UXH0 198 aa3.04□□□□□ -1.92
LSM1P1-201ENST00000438629 LPCAT2Q7L5N7 544 aa3.04□□□□□ -1.92
LSM1P1-201ENST00000438629 NUFIP2Q7Z417 695 aaKnown RBP3.04□□□□□ -1.92
LSM1P1-201ENST00000438629 SLC25A42Q86VD7 318 aa3.04□□□□□ -1.92
LSM1P1-201ENST00000438629 ZNF410Q86VK4 478 aa3.04□□□□□ -1.92
LSM1P1-201ENST00000438629 SLC47A2Q86VL8 602 aa3.04□□□□□ -1.92
LSM1P1-201ENST00000438629 STHQ8IWL8 128 aa3.04□□□□□ -1.92
LSM1P1-201ENST00000438629 POM121L12Q8N7R1 296 aa3.04□□□□□ -1.92
LSM1P1-201ENST00000438629 SAMD12Q8N8I0 201 aa3.04□□□□□ -1.92
LSM1P1-201ENST00000438629 FAM184AQ8NB25 1140 aa3.04□□□□□ -1.92
LSM1P1-201ENST00000438629 CCDC148Q8NFR7 591 aa3.04□□□□□ -1.92
LSM1P1-201ENST00000438629 OR4L1Q8NH43 312 aa3.04□□□□□ -1.92
LSM1P1-201ENST00000438629 FBXO25Q8TCJ0 367 aa3.04□□□□□ -1.92
LSM1P1-201ENST00000438629 MRPL24Q96A35 216 aaKnown RBP3.04□□□□□ -1.92
LSM1P1-201ENST00000438629 TMEM186Q96B77 213 aa3.04□□□□□ -1.92
LSM1P1-201ENST00000438629 TUBGCP3Q96CW5 907 aa3.04□□□□□ -1.92
LSM1P1-201ENST00000438629 DCTN5Q9BTE1 182 aa3.04□□□□□ -1.92
LSM1P1-201ENST00000438629 CAPS2Q9BXY5 557 aa3.04□□□□□ -1.92
LSM1P1-201ENST00000438629 PUS3Q9BZE2 481 aaKnown RBP3.04□□□□□ -1.92
LSM1P1-201ENST00000438629 NCOR1P1Q9H4R4 102 aa3.04□□□□□ -1.92
LSM1P1-201ENST00000438629 NT5DC2Q9H857 520 aa3.04□□□□□ -1.92
LSM1P1-201ENST00000438629 VCPKMTQ9H867 229 aa3.04□□□□□ -1.92
LSM1P1-201ENST00000438629 GNB4Q9HAV0 340 aa3.04□□□□□ -1.92
LSM1P1-201ENST00000438629 PRMT8Q9NR22 394 aaPredicted RBP3.04□□□□□ -1.92
LSM1P1-201ENST00000438629 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.04□□□□□ -1.92
LSM1P1-201ENST00000438629 TMOD2Q9NZR1 351 aa3.04□□□□□ -1.92
LSM1P1-201ENST00000438629 ERVK-18Q9QC07 812 aa3.04□□□□□ -1.92
LSM1P1-201ENST00000438629 CIDEBQ9UHD4 219 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms