RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 NRXN2Q9P2S2 1712 aa2.29□□□□□ -2.04
HMGB1P31-201ENST00000437242 KDM6AO15550 1401 aaPredicted RBP2.29□□□□□ -2.04
HMGB1P31-201ENST00000437242 ANKRD36BQ8N2N9 1353 aa2.29□□□□□ -2.04
HMGB1P31-201ENST00000437242 CARMIL3Q8ND23 1372 aa2.29□□□□□ -2.04
HMGB1P31-201ENST00000437242 CCDC162PA2VCL2 907 aa2.29□□□□□ -2.04
HMGB1P31-201ENST00000437242 LMO7DNF2Z398 122 aa2.29□□□□□ -2.04
HMGB1P31-201ENST00000437242 H0YIG0 161 aa2.29□□□□□ -2.04
HMGB1P31-201ENST00000437242 DDX39AO00148 427 aaKnown RBP2.29□□□□□ -2.04
HMGB1P31-201ENST00000437242 P2RX6O15547 441 aa2.29□□□□□ -2.04
HMGB1P31-201ENST00000437242 MLNRO43193 412 aa2.29□□□□□ -2.04
HMGB1P31-201ENST00000437242 SYT7O43581 403 aa2.29□□□□□ -2.04
HMGB1P31-201ENST00000437242 TLX2O43763 284 aaPredicted RBP2.29□□□□□ -2.04
HMGB1P31-201ENST00000437242 KINO60870 393 aaKnown RBP2.29□□□□□ -2.04
HMGB1P31-201ENST00000437242 NME6O75414 186 aaPredicted RBP2.29□□□□□ -2.04
HMGB1P31-201ENST00000437242 AKAP3O75969 853 aa2.29□□□□□ -2.04
HMGB1P31-201ENST00000437242 GAS8O95995 478 aa2.29□□□□□ -2.04
HMGB1P31-201ENST00000437242 GSTA2P09210 222 aa2.29□□□□□ -2.04
HMGB1P31-201ENST00000437242 ACKR3P25106 362 aa2.29□□□□□ -2.04
HMGB1P31-201ENST00000437242 PKLRP30613 574 aa2.29□□□□□ -2.04
HMGB1P31-201ENST00000437242 SERPINH1P50454 418 aaKnown RBP2.29□□□□□ -2.04
HMGB1P31-201ENST00000437242 CCR4P51679 360 aa2.29□□□□□ -2.04
HMGB1P31-201ENST00000437242 NDST2P52849 883 aa2.29□□□□□ -2.04
HMGB1P31-201ENST00000437242 GABPAQ06546 454 aa2.29□□□□□ -2.04
HMGB1P31-201ENST00000437242 MFGE8Q08431 387 aaPredicted RBP2.29□□□□□ -2.04
HMGB1P31-201ENST00000437242 LCP2Q13094 533 aa2.29□□□□□ -2.04
HMGB1P31-201ENST00000437242 ITPK1Q13572 414 aa2.29□□□□□ -2.04
HMGB1P31-201ENST00000437242 ZNF79Q15937 498 aa2.29□□□□□ -2.04
HMGB1P31-201ENST00000437242 SGCBQ16585 318 aa2.29□□□□□ -2.04
HMGB1P31-201ENST00000437242 LRRC37A5PQ49AS3 106 aa2.29□□□□□ -2.04
HMGB1P31-201ENST00000437242 IFI44LQ53G44 452 aa2.29□□□□□ -2.04
HMGB1P31-201ENST00000437242 PRAMEF8Q5VWM4 474 aa2.29□□□□□ -2.04
HMGB1P31-201ENST00000437242 C17orf107Q6ZR85 190 aa2.29□□□□□ -2.04
HMGB1P31-201ENST00000437242 Q6ZVQ6 151 aa2.29□□□□□ -2.04
HMGB1P31-201ENST00000437242 PRSS42Q7Z5A4 293 aa2.29□□□□□ -2.04
HMGB1P31-201ENST00000437242 C5orf24Q7Z6I8 188 aa2.29□□□□□ -2.04
HMGB1P31-201ENST00000437242 ASPGQ86U10 573 aa2.29□□□□□ -2.04
HMGB1P31-201ENST00000437242 SNX32Q86XE0 403 aa2.29□□□□□ -2.04
HMGB1P31-201ENST00000437242 TMEM126BQ8IUX1 230 aa2.29□□□□□ -2.04
HMGB1P31-201ENST00000437242 SLC43A2Q8N370 569 aa2.29□□□□□ -2.04
HMGB1P31-201ENST00000437242 ZNF713Q8N859 430 aaPredicted RBP2.29□□□□□ -2.04
HMGB1P31-201ENST00000437242 NAT8LQ8N9F0 302 aa2.29□□□□□ -2.04
HMGB1P31-201ENST00000437242 SMYD1Q8NB12 490 aa2.29□□□□□ -2.04
HMGB1P31-201ENST00000437242 CSNK1G2-AS1Q8NCQ2 148 aa2.29□□□□□ -2.04
HMGB1P31-201ENST00000437242 OR9Q2Q8NGE9 314 aa2.29□□□□□ -2.04
HMGB1P31-201ENST00000437242 RPLP0P6Q8NHW5 317 aa2.29□□□□□ -2.04
HMGB1P31-201ENST00000437242 BADQ92934 168 aa2.29□□□□□ -2.04
HMGB1P31-201ENST00000437242 SLC35C1Q96A29 364 aa2.29□□□□□ -2.04
HMGB1P31-201ENST00000437242 BPIFA2Q96DR5 249 aa2.29□□□□□ -2.04
HMGB1P31-201ENST00000437242 C5orf30Q96GV9 206 aa2.29□□□□□ -2.04
HMGB1P31-201ENST00000437242 EPSTI1Q96J88 318 aa2.29□□□□□ -2.04
HMGB1P31-201ENST00000437242 GUCD1Q96NT3 240 aa2.29□□□□□ -2.04
HMGB1P31-201ENST00000437242 PINK1Q9BXM7 581 aa2.29□□□□□ -2.04
HMGB1P31-201ENST00000437242 OSBPL8Q9BZF1 889 aa2.29□□□□□ -2.04
HMGB1P31-201ENST00000437242 ACPTQ9BZG2 426 aa2.29□□□□□ -2.04
HMGB1P31-201ENST00000437242 S100A14Q9HCY8 104 aa2.29□□□□□ -2.04
HMGB1P31-201ENST00000437242 PRMT8Q9NR22 394 aaPredicted RBP2.29□□□□□ -2.04
HMGB1P31-201ENST00000437242 NLGN3Q9NZ94 848 aa2.29□□□□□ -2.04
HMGB1P31-201ENST00000437242 ZNF319Q9P2F9 582 aa2.29□□□□□ -2.04
HMGB1P31-201ENST00000437242 KCNK6Q9Y257 313 aa2.29□□□□□ -2.04
HMGB1P31-201ENST00000437242 NAALAD2Q9Y3Q0 740 aa2.29□□□□□ -2.04
HMGB1P31-201ENST00000437242 ETV7Q9Y603 341 aa2.29□□□□□ -2.04
HMGB1P31-201ENST00000437242 SLX4Q8IY92 1834 aa2.28□□□□□ -2.04
HMGB1P31-201ENST00000437242 LAMB4A4D0S4 1761 aa2.28□□□□□ -2.04
HMGB1P31-201ENST00000437242 ARFGEF2Q9Y6D5 1785 aa2.28□□□□□ -2.04
HMGB1P31-201ENST00000437242 CNTNAP1P78357 1384 aa2.28□□□□□ -2.04
HMGB1P31-201ENST00000437242 PALLDQ8WX93 1383 aa2.28□□□□□ -2.04
HMGB1P31-201ENST00000437242 FAM205AQ6ZU69 1335 aa2.28□□□□□ -2.04
HMGB1P31-201ENST00000437242 A0A0A6YYC8 382 aaPredicted RBP2.28□□□□□ -2.04
HMGB1P31-201ENST00000437242 IGHV3-20A0A0C4DH32 117 aa2.28□□□□□ -2.04
HMGB1P31-201ENST00000437242 E9PAM4 449 aa2.28□□□□□ -2.04
HMGB1P31-201ENST00000437242 I3L1I5 382 aaPredicted RBP2.28□□□□□ -2.04
HMGB1P31-201ENST00000437242 CHUKO15111 745 aa2.28□□□□□ -2.04
HMGB1P31-201ENST00000437242 TNFSF12O43508 249 aa2.28□□□□□ -2.04
HMGB1P31-201ENST00000437242 PRDM1O75626 825 aa2.28□□□□□ -2.04
HMGB1P31-201ENST00000437242 ANGPTL1O95841 491 aa2.28□□□□□ -2.04
HMGB1P31-201ENST00000437242 RPLP0P05388 317 aaKnown RBP2.28□□□□□ -2.04
HMGB1P31-201ENST00000437242 MMP10P09238 476 aa2.28□□□□□ -2.04
HMGB1P31-201ENST00000437242 SBK2P0C263 348 aa2.28□□□□□ -2.04
HMGB1P31-201ENST00000437242 CPA3P15088 417 aa2.28□□□□□ -2.04
HMGB1P31-201ENST00000437242 HLA-DPA1P20036 260 aa2.28□□□□□ -2.04
HMGB1P31-201ENST00000437242 CYP3A5P20815 502 aa2.28□□□□□ -2.04
HMGB1P31-201ENST00000437242 CRYBA2P53672 197 aa2.28□□□□□ -2.04
HMGB1P31-201ENST00000437242 ADARP55265 1226 aaKnown RBP2.28□□□□□ -2.04
HMGB1P31-201ENST00000437242 PPIAP62937 165 aaKnown RBP2.28□□□□□ -2.04
HMGB1P31-201ENST00000437242 UBXN1Q04323 297 aa2.28□□□□□ -2.04
HMGB1P31-201ENST00000437242 NPRL3Q12980 569 aa2.28□□□□□ -2.04
HMGB1P31-201ENST00000437242 RPA4Q13156 261 aa2.28□□□□□ -2.04
HMGB1P31-201ENST00000437242 GCKRQ14397 625 aa2.28□□□□□ -2.04
HMGB1P31-201ENST00000437242 MEF2DQ14814 521 aa2.28□□□□□ -2.04
HMGB1P31-201ENST00000437242 UPP1Q16831 310 aa2.28□□□□□ -2.04
HMGB1P31-201ENST00000437242 Q1RN00 199 aa2.28□□□□□ -2.04
HMGB1P31-201ENST00000437242 RFTN2Q52LD8 501 aaPredicted RBP2.28□□□□□ -2.04
HMGB1P31-201ENST00000437242 C2orf83Q53S99 150 aa2.28□□□□□ -2.04
HMGB1P31-201ENST00000437242 C1orf189Q5VU69 101 aa2.28□□□□□ -2.04
HMGB1P31-201ENST00000437242 AGAP7PQ5VUJ5 663 aa2.28□□□□□ -2.04
HMGB1P31-201ENST00000437242 SNRNP48Q6IEG0 339 aaKnown RBP2.28□□□□□ -2.04
HMGB1P31-201ENST00000437242 ALKBH5Q6P6C2 394 aaKnown RBP2.28□□□□□ -2.04
HMGB1P31-201ENST00000437242 B3GLCTQ6Y288 498 aa2.28□□□□□ -2.04
HMGB1P31-201ENST00000437242 C17orf64Q86WR6 236 aa2.28□□□□□ -2.04
HMGB1P31-201ENST00000437242 PRR22Q8IZ63 422 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms