RNA–Protein interactions for RNA: ENST00000436412.1

NIF3L1-208, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 3

Gene NIF3L1, Length 479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-208ENST00000436412 GIPRP48546 466 aa7.67□□□□□ -1.18
NIF3L1-208ENST00000436412 TRPC1P48995 793 aa7.67□□□□□ -1.18
NIF3L1-208ENST00000436412 HNRNPFP52597 415 aaKnown RBP7.67□□□□□ -1.18
NIF3L1-208ENST00000436412 TIAL1Q01085 375 aaKnown RBP eCLIP7.67□□□□□ -1.18
NIF3L1-208ENST00000436412 TGM3Q08188 693 aa7.67□□□□□ -1.18
NIF3L1-208ENST00000436412 ASPHQ12797 758 aa7.67□□□□□ -1.18
NIF3L1-208ENST00000436412 KIF5AQ12840 1032 aa7.67□□□□□ -1.18
NIF3L1-208ENST00000436412 BIKQ13323 160 aa7.67□□□□□ -1.18
NIF3L1-208ENST00000436412 NHSL2Q5HYW2 709 aa7.67□□□□□ -1.18
NIF3L1-208ENST00000436412 PODNL1Q6PEZ8 512 aa7.67□□□□□ -1.18
NIF3L1-208ENST00000436412 PAQR3Q6TCH7 311 aa7.67□□□□□ -1.18
NIF3L1-208ENST00000436412 GSTA5Q7RTV2 222 aa7.67□□□□□ -1.18
NIF3L1-208ENST00000436412 CLNKQ7Z7G1 428 aa7.67□□□□□ -1.18
NIF3L1-208ENST00000436412 CTAGE6Q86UF2 777 aa7.67□□□□□ -1.18
NIF3L1-208ENST00000436412 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.67□□□□□ -1.18
NIF3L1-208ENST00000436412 KLHDC8AQ8IYD2 350 aa7.67□□□□□ -1.18
NIF3L1-208ENST00000436412 FAM47BQ8NA70 645 aa7.67□□□□□ -1.18
NIF3L1-208ENST00000436412 TMEM158Q8WZ71 300 aa7.67□□□□□ -1.18
NIF3L1-208ENST00000436412 ANKRD7Q92527 254 aa7.67□□□□□ -1.18
NIF3L1-208ENST00000436412 ZNF669Q96BR6 464 aaPredicted RBP7.67□□□□□ -1.18
NIF3L1-208ENST00000436412 MS4A6EQ96DS6 147 aa7.67□□□□□ -1.18
NIF3L1-208ENST00000436412 LINGO1Q96FE5 620 aa7.67□□□□□ -1.18
NIF3L1-208ENST00000436412 ZNF597Q96LX8 424 aa7.67□□□□□ -1.18
NIF3L1-208ENST00000436412 TSNARE1Q96NA8 513 aa7.67□□□□□ -1.18
NIF3L1-208ENST00000436412 QRFPRQ96P65 431 aa7.67□□□□□ -1.18
NIF3L1-208ENST00000436412 SERINC2Q96SA4 455 aa7.67□□□□□ -1.18
NIF3L1-208ENST00000436412 CCL19Q99731 98 aa7.67□□□□□ -1.18
NIF3L1-208ENST00000436412 WDR83Q9BRX9 315 aaKnown RBP7.67□□□□□ -1.18
NIF3L1-208ENST00000436412 FAM167BQ9BTA0 163 aa7.67□□□□□ -1.18
NIF3L1-208ENST00000436412 SFXN3Q9BWM7 321 aa7.67□□□□□ -1.18
NIF3L1-208ENST00000436412 AICDAQ9GZX7 198 aa7.67□□□□□ -1.18
NIF3L1-208ENST00000436412 ACBD3Q9H3P7 528 aa7.67□□□□□ -1.18
NIF3L1-208ENST00000436412 PROK2Q9HC23 129 aa7.67□□□□□ -1.18
NIF3L1-208ENST00000436412 XAB2Q9HCS7 855 aaKnown RBP7.67□□□□□ -1.18
NIF3L1-208ENST00000436412 C20orf96Q9NUD7 363 aaPredicted RBP7.67□□□□□ -1.18
NIF3L1-208ENST00000436412 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.67□□□□□ -1.18
NIF3L1-208ENST00000436412 TRMT1Q9NXH9 659 aaKnown RBP7.67□□□□□ -1.18
NIF3L1-208ENST00000436412 DAPP1Q9UN19 280 aa7.67□□□□□ -1.18
NIF3L1-208ENST00000436412 ZKSCAN5Q9Y2L8 839 aa7.67□□□□□ -1.18
NIF3L1-208ENST00000436412 SF3B6Q9Y3B4 125 aaKnown RBP7.67□□□□□ -1.18
NIF3L1-208ENST00000436412 REXO2Q9Y3B8 237 aaKnown RBP7.67□□□□□ -1.18
NIF3L1-208ENST00000436412 CHCHD2Q9Y6H1 151 aaPredicted RBP7.67□□□□□ -1.18
NIF3L1-208ENST00000436412 HEATR5AQ86XA9 2040 aa7.67□□□□□ -1.18
NIF3L1-208ENST00000436412 ALPK2Q86TB3 2170 aa7.66□□□□□ -1.18
NIF3L1-208ENST00000436412 KDM4EB2RXH2 506 aaPredicted RBP7.66□□□□□ -1.18
NIF3L1-208ENST00000436412 TMCC2O75069 709 aa7.66□□□□□ -1.18
NIF3L1-208ENST00000436412 TRIM3O75382 744 aaPredicted RBP7.66□□□□□ -1.18
NIF3L1-208ENST00000436412 CNOT4O95628 575 aaKnown RBP7.66□□□□□ -1.18
NIF3L1-208ENST00000436412 HPNP05981 417 aa7.66□□□□□ -1.18
NIF3L1-208ENST00000436412 CD3EP07766 207 aa7.66□□□□□ -1.18
NIF3L1-208ENST00000436412 TMIGD3P0DMS9 266 aaPredicted RBP7.66□□□□□ -1.18
NIF3L1-208ENST00000436412 HNRNPH1P31943 449 aaKnown RBP7.66□□□□□ -1.18
NIF3L1-208ENST00000436412 CPA2P48052 419 aa7.66□□□□□ -1.18
NIF3L1-208ENST00000436412 DIO3P55073 304 aa7.66□□□□□ -1.18
NIF3L1-208ENST00000436412 MTTPP55157 894 aa7.66□□□□□ -1.18
NIF3L1-208ENST00000436412 LIM2P55344 173 aa7.66□□□□□ -1.18
NIF3L1-208ENST00000436412 WNT3P56703 355 aa7.66□□□□□ -1.18
NIF3L1-208ENST00000436412 IL2P60568 153 aa7.66□□□□□ -1.18
NIF3L1-208ENST00000436412 RCAN2Q14206 197 aa7.66□□□□□ -1.18
NIF3L1-208ENST00000436412 ACKR1Q16570 336 aa7.66□□□□□ -1.18
NIF3L1-208ENST00000436412 ADPRMQ3LIE5 342 aa7.66□□□□□ -1.18
NIF3L1-208ENST00000436412 PRAMEF20Q5VT98 475 aa7.66□□□□□ -1.18
NIF3L1-208ENST00000436412 TRIM40Q6P9F5 258 aa7.66□□□□□ -1.18
NIF3L1-208ENST00000436412 SCIMPQ6UWF3 145 aa7.66□□□□□ -1.18
NIF3L1-208ENST00000436412 TMIGD1Q6UXZ0 262 aa7.66□□□□□ -1.18
NIF3L1-208ENST00000436412 TMPRSS11BQ86T26 416 aa7.66□□□□□ -1.18
NIF3L1-208ENST00000436412 KIAA1328Q86T90 577 aa7.66□□□□□ -1.18
NIF3L1-208ENST00000436412 CAND1Q86VP6 1230 aaKnown RBP7.66□□□□□ -1.18
NIF3L1-208ENST00000436412 THOC6Q86W42 341 aaKnown RBP7.66□□□□□ -1.18
NIF3L1-208ENST00000436412 KRT78Q8N1N4 520 aa7.66□□□□□ -1.18
NIF3L1-208ENST00000436412 ZNF321PQ8N8H1 164 aa7.66□□□□□ -1.18
NIF3L1-208ENST00000436412 OR2L5Q8NG80 312 aa7.66□□□□□ -1.18
NIF3L1-208ENST00000436412 ZPLD1Q8TCW7 415 aa7.66□□□□□ -1.18
NIF3L1-208ENST00000436412 ZNF721Q8TF20 911 aa7.66□□□□□ -1.18
NIF3L1-208ENST00000436412 SREK1Q8WXA9 508 aaKnown RBP7.66□□□□□ -1.18
NIF3L1-208ENST00000436412 PERPQ96FX8 193 aa7.66□□□□□ -1.18
NIF3L1-208ENST00000436412 SENP5Q96HI0 755 aaPredicted RBP7.66□□□□□ -1.18
NIF3L1-208ENST00000436412 ART5Q96L15 291 aa7.66□□□□□ -1.18
NIF3L1-208ENST00000436412 JSRP1Q96MG2 331 aaPredicted RBP7.66□□□□□ -1.18
NIF3L1-208ENST00000436412 RUNDC3BQ96NL0 473 aa7.66□□□□□ -1.18
NIF3L1-208ENST00000436412 TRIB1Q96RU8 372 aa7.66□□□□□ -1.18
NIF3L1-208ENST00000436412 DOHHQ9BU89 302 aa7.66□□□□□ -1.18
NIF3L1-208ENST00000436412 ROGDIQ9GZN7 287 aa7.66□□□□□ -1.18
NIF3L1-208ENST00000436412 REXO4Q9GZR2 422 aaKnown RBP7.66□□□□□ -1.18
NIF3L1-208ENST00000436412 PIGMQ9H3S5 423 aa7.66□□□□□ -1.18
NIF3L1-208ENST00000436412 NT5DC2Q9H857 520 aa7.66□□□□□ -1.18
NIF3L1-208ENST00000436412 COPS7BQ9H9Q2 264 aaPredicted RBP7.66□□□□□ -1.18
NIF3L1-208ENST00000436412 LYRM4Q9HD34 91 aa7.66□□□□□ -1.18
NIF3L1-208ENST00000436412 GALNT8Q9NY28 637 aa7.66□□□□□ -1.18
NIF3L1-208ENST00000436412 ZNF226Q9NYT6 803 aa7.66□□□□□ -1.18
NIF3L1-208ENST00000436412 CAMK2AQ9UQM7 478 aa7.66□□□□□ -1.18
NIF3L1-208ENST00000436412 TESMINQ9Y4I5 508 aa7.66□□□□□ -1.18
NIF3L1-208ENST00000436412 NPFFR2Q9Y5X5 522 aa7.66□□□□□ -1.18
NIF3L1-208ENST00000436412 PLCE1Q9P212 2302 aa7.66□□□□□ -1.18
NIF3L1-208ENST00000436412 A0A0G2JN53 185 aa7.65□□□□□ -1.18
NIF3L1-208ENST00000436412 TCRBV7S3A2A0A539 114 aa7.65□□□□□ -1.18
NIF3L1-208ENST00000436412 ANKDD1BA6NHY2 528 aa7.65□□□□□ -1.18
NIF3L1-208ENST00000436412 CAPN14A8MX76 684 aa7.65□□□□□ -1.18
NIF3L1-208ENST00000436412 TP53I11O14683 189 aa7.65□□□□□ -1.18
NIF3L1-208ENST00000436412 CTIFO43310 598 aaKnown RBP7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms