RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 FAM9CQ8IZT9 166 aa16.98■□□□□ 0.31
HLA-F-220ENST00000434407 LIX1Q8N485 282 aa16.98■□□□□ 0.31
HLA-F-220ENST00000434407 SIMC1Q8NDZ2 872 aa16.98■□□□□ 0.31
HLA-F-220ENST00000434407 OR9A2Q8NGT5 310 aa16.98■□□□□ 0.31
HLA-F-220ENST00000434407 DNAJB8Q8NHS0 232 aa16.98■□□□□ 0.31
HLA-F-220ENST00000434407 CLHC1Q8NHS4 586 aa16.98■□□□□ 0.31
HLA-F-220ENST00000434407 GRHL3Q8TE85 626 aa16.98■□□□□ 0.31
HLA-F-220ENST00000434407 GFM2Q969S9 779 aaKnown RBP16.98■□□□□ 0.31
HLA-F-220ENST00000434407 C5orf34Q96MH7 638 aa16.98■□□□□ 0.31
HLA-F-220ENST00000434407 AMDHD1Q96NU7 426 aa16.98■□□□□ 0.31
HLA-F-220ENST00000434407 GLIPR2Q9H4G4 154 aa16.98■□□□□ 0.31
HLA-F-220ENST00000434407 HPF1Q9NWY4 346 aa16.98■□□□□ 0.31
HLA-F-220ENST00000434407 ATP6V1HQ9UI12 483 aa16.98■□□□□ 0.31
HLA-F-220ENST00000434407 CFL2Q9Y281 166 aa16.98■□□□□ 0.31
HLA-F-220ENST00000434407 A0A087WV62 115 aa16.97■□□□□ 0.31
HLA-F-220ENST00000434407 PLOD2O00469 737 aa16.97■□□□□ 0.31
HLA-F-220ENST00000434407 AKAP10O43572 662 aa16.97■□□□□ 0.31
HLA-F-220ENST00000434407 VPS4BO75351 444 aa16.97■□□□□ 0.31
HLA-F-220ENST00000434407 BCAS2O75934 225 aaPredicted RBP16.97■□□□□ 0.31
HLA-F-220ENST00000434407 RASAL1O95294 804 aa16.97■□□□□ 0.31
HLA-F-220ENST00000434407 WISP1O95388 367 aa16.97■□□□□ 0.31
HLA-F-220ENST00000434407 GPX3P22352 226 aa16.97■□□□□ 0.31
HLA-F-220ENST00000434407 NTSP30990 170 aa16.97■□□□□ 0.31
HLA-F-220ENST00000434407 C21orf58P58505 322 aa16.97■□□□□ 0.31
HLA-F-220ENST00000434407 PPP2R2AP63151 447 aa16.97■□□□□ 0.31
HLA-F-220ENST00000434407 EXOSC7Q15024 291 aaKnown RBP16.97■□□□□ 0.31
HLA-F-220ENST00000434407 ZNF791Q3KP31 576 aaPredicted RBP16.97■□□□□ 0.31
HLA-F-220ENST00000434407 IL20RBQ6UXL0 311 aa16.97■□□□□ 0.31
HLA-F-220ENST00000434407 GALNTL5Q7Z4T8 443 aa16.97■□□□□ 0.31
HLA-F-220ENST00000434407 MDGA2Q7Z553 956 aa16.97■□□□□ 0.31
HLA-F-220ENST00000434407 R3HCC1LQ7Z5L2 792 aaKnown RBP16.97■□□□□ 0.31
HLA-F-220ENST00000434407 BCORP1Q8N888 145 aa16.97■□□□□ 0.31
HLA-F-220ENST00000434407 GOLM1Q8NBJ4 401 aa16.97■□□□□ 0.31
HLA-F-220ENST00000434407 OR52R1Q8NGF1 315 aa16.97■□□□□ 0.31
HLA-F-220ENST00000434407 SLC22A8Q8TCC7 542 aa16.97■□□□□ 0.31
HLA-F-220ENST00000434407 KAT2AQ92830 837 aa16.97■□□□□ 0.31
HLA-F-220ENST00000434407 TMEM125Q96AQ2 219 aa16.97■□□□□ 0.31
HLA-F-220ENST00000434407 SGCZQ96LD1 299 aa16.97■□□□□ 0.31
HLA-F-220ENST00000434407 GAL3ST4Q96RP7 486 aa16.97■□□□□ 0.31
HLA-F-220ENST00000434407 SLX1AQ9BQ83 275 aa16.97■□□□□ 0.31
HLA-F-220ENST00000434407 C1orf50Q9BV19 199 aa16.97■□□□□ 0.31
HLA-F-220ENST00000434407 NUF2Q9BZD4 464 aa16.97■□□□□ 0.31
HLA-F-220ENST00000434407 SH2D2AQ9NP31 389 aa16.97■□□□□ 0.31
HLA-F-220ENST00000434407 KLHL1Q9NR64 748 aa16.97■□□□□ 0.31
HLA-F-220ENST00000434407 AGPAT4Q9NRZ5 378 aa16.97■□□□□ 0.31
HLA-F-220ENST00000434407 MAP10Q9P2G4 905 aa16.97■□□□□ 0.31
HLA-F-220ENST00000434407 DTX4Q9Y2E6 619 aa16.97■□□□□ 0.31
HLA-F-220ENST00000434407 USP9XQ93008 2570 aaPredicted RBP16.97■□□□□ 0.31
HLA-F-220ENST00000434407 ZNF407Q9C0G0 2248 aa16.97■□□□□ 0.31
HLA-F-220ENST00000434407 SLCO1B7G3V0H7 640 aa16.96■□□□□ 0.31
HLA-F-220ENST00000434407 PYCARD-AS1I3L0S3 204 aa16.96■□□□□ 0.31
HLA-F-220ENST00000434407 SDHDO14521 159 aa16.96■□□□□ 0.31
HLA-F-220ENST00000434407 SCAMP2O15127 329 aaKnown RBP16.96■□□□□ 0.31
HLA-F-220ENST00000434407 HDAC3O15379 428 aa16.96■□□□□ 0.31
HLA-F-220ENST00000434407 LRATO95237 230 aa16.96■□□□□ 0.31
HLA-F-220ENST00000434407 FBXO45P0C2W1 286 aa16.96■□□□□ 0.31
HLA-F-220ENST00000434407 NCBP2P52298 156 aaKnown RBP eCLIP16.96■□□□□ 0.31
HLA-F-220ENST00000434407 PTGR1Q14914 329 aa16.96■□□□□ 0.31
HLA-F-220ENST00000434407 OGFOD2Q6N063 350 aa16.96■□□□□ 0.31
HLA-F-220ENST00000434407 FAM180AQ6UWF9 173 aa16.96■□□□□ 0.31
HLA-F-220ENST00000434407 LARP4Q71RC2 724 aaKnown RBP eCLIP16.96■□□□□ 0.31
HLA-F-220ENST00000434407 RIMKLAQ8IXN7 391 aa16.96■□□□□ 0.31
HLA-F-220ENST00000434407 DND1Q8IYX4 353 aaKnown RBP16.96■□□□□ 0.31
HLA-F-220ENST00000434407 OR7G2Q8NG99 324 aa16.96■□□□□ 0.31
HLA-F-220ENST00000434407 PPCDCQ96CD2 204 aa16.96■□□□□ 0.31
HLA-F-220ENST00000434407 TIMMDC1Q9NPL8 285 aa16.96■□□□□ 0.31
HLA-F-220ENST00000434407 ACSS1Q9NUB1 689 aaPredicted RBP16.96■□□□□ 0.31
HLA-F-220ENST00000434407 NOP53Q9NZM5 478 aaKnown RBP16.96■□□□□ 0.31
HLA-F-220ENST00000434407 PRODH2Q9UF12 536 aa16.96■□□□□ 0.31
HLA-F-220ENST00000434407 BCAP29Q9UHQ4 241 aa16.96■□□□□ 0.31
HLA-F-220ENST00000434407 EIF3LQ9Y262 564 aaKnown RBP16.96■□□□□ 0.31
HLA-F-220ENST00000434407 KLF13Q9Y2Y9 288 aaPredicted RBP16.96■□□□□ 0.31
HLA-F-220ENST00000434407 LRRK2Q5S007 2527 aa16.96■□□□□ 0.3
HLA-F-220ENST00000434407 TCP11X1B4DZS4 312 aa16.95■□□□□ 0.3
HLA-F-220ENST00000434407 PDPK1O15530 556 aa16.95■□□□□ 0.3
HLA-F-220ENST00000434407 PSMG1O95456 288 aa16.95■□□□□ 0.3
HLA-F-220ENST00000434407 CRYABP02511 175 aaKnown RBP16.95■□□□□ 0.3
HLA-F-220ENST00000434407 G6PDP11413 515 aa16.95■□□□□ 0.3
HLA-F-220ENST00000434407 PRPS1L1P21108 318 aa16.95■□□□□ 0.3
HLA-F-220ENST00000434407 RPL3P39023 403 aaKnown RBP16.95■□□□□ 0.3
HLA-F-220ENST00000434407 NR0B1P51843 470 aaKnown RBP16.95■□□□□ 0.3
HLA-F-220ENST00000434407 DCAF7P61962 342 aa16.95■□□□□ 0.3
HLA-F-220ENST00000434407 MAPKAPK3Q16644 382 aa16.95■□□□□ 0.3
HLA-F-220ENST00000434407 ANKRD26P1Q6NSI1 321 aa16.95■□□□□ 0.3
HLA-F-220ENST00000434407 RTL4Q6ZR62 310 aa16.95■□□□□ 0.3
HLA-F-220ENST00000434407 WDR75Q8IWA0 830 aaKnown RBP16.95■□□□□ 0.3
HLA-F-220ENST00000434407 TAGAPQ8N103 731 aa16.95■□□□□ 0.3
HLA-F-220ENST00000434407 PSD4Q8NDX1 1056 aa16.95■□□□□ 0.3
HLA-F-220ENST00000434407 NR4A3Q92570 626 aa16.95■□□□□ 0.3
HLA-F-220ENST00000434407 CIDECQ96AQ7 238 aaPredicted RBP16.95■□□□□ 0.3
HLA-F-220ENST00000434407 COQ8BQ96D53 544 aa16.95■□□□□ 0.3
HLA-F-220ENST00000434407 SPACA9Q96E40 222 aaPredicted RBP16.95■□□□□ 0.3
HLA-F-220ENST00000434407 PPP1R36Q96LQ0 422 aa16.95■□□□□ 0.3
HLA-F-220ENST00000434407 C7orf26Q96N11 449 aa16.95■□□□□ 0.3
HLA-F-220ENST00000434407 FRMD6Q96NE9 622 aa16.95■□□□□ 0.3
HLA-F-220ENST00000434407 NXF5Q9H1B4 397 aaKnown RBP16.95■□□□□ 0.3
HLA-F-220ENST00000434407 ANKRA2Q9H9E1 313 aa16.95■□□□□ 0.3
HLA-F-220ENST00000434407 SH3BP4Q9P0V3 963 aa16.95■□□□□ 0.3
HLA-F-220ENST00000434407 C19orf53Q9UNZ5 99 aaPredicted RBP16.95■□□□□ 0.3
HLA-F-220ENST00000434407 ERVK-11Q9UQG0 969 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms