RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 CNN1P51911 297 aaKnown RBP2.35□□□□□ -2.03
PTPN4-205ENST00000433888 HMGCS2P54868 508 aa2.35□□□□□ -2.03
PTPN4-205ENST00000433888 SLC26A5P58743 744 aa2.35□□□□□ -2.03
PTPN4-205ENST00000433888 PPP1R8Q12972 351 aaKnown RBP2.35□□□□□ -2.03
PTPN4-205ENST00000433888 MAJINQ3KP22 176 aa2.35□□□□□ -2.03
PTPN4-205ENST00000433888 CMPK2Q5EBM0 449 aa2.35□□□□□ -2.03
PTPN4-205ENST00000433888 TOR1AIP1Q5JTV8 583 aa2.35□□□□□ -2.03
PTPN4-205ENST00000433888 TCEAL6Q6IPX3 200 aa2.35□□□□□ -2.03
PTPN4-205ENST00000433888 C17orf107Q6ZR85 190 aa2.35□□□□□ -2.03
PTPN4-205ENST00000433888 TMEM26Q6ZUK4 368 aa2.35□□□□□ -2.03
PTPN4-205ENST00000433888 C15orf52Q6ZUT6 534 aaKnown RBP2.35□□□□□ -2.03
PTPN4-205ENST00000433888 MIER3Q7Z3K6 550 aa2.35□□□□□ -2.03
PTPN4-205ENST00000433888 LAX1Q8IWV1 398 aa2.35□□□□□ -2.03
PTPN4-205ENST00000433888 KDM8Q8N371 416 aa2.35□□□□□ -2.03
PTPN4-205ENST00000433888 HDDC3Q8N4P3 179 aa2.35□□□□□ -2.03
PTPN4-205ENST00000433888 RELL2Q8NC24 303 aaPredicted RBP2.35□□□□□ -2.03
PTPN4-205ENST00000433888 ZNF540Q8NDQ6 660 aa2.35□□□□□ -2.03
PTPN4-205ENST00000433888 PCNPQ8WW12 178 aaKnown RBP2.35□□□□□ -2.03
PTPN4-205ENST00000433888 SELENOMQ8WWX9 145 aa2.35□□□□□ -2.03
PTPN4-205ENST00000433888 GGHQ92820 318 aa2.35□□□□□ -2.03
PTPN4-205ENST00000433888 TEX13AQ9BXU3 409 aaPredicted RBP2.35□□□□□ -2.03
PTPN4-205ENST00000433888 MTIF3Q9H2K0 278 aaKnown RBP2.35□□□□□ -2.03
PTPN4-205ENST00000433888 LIME1Q9H400 295 aa2.35□□□□□ -2.03
PTPN4-205ENST00000433888 C5orf66Q9H5L9 145 aa2.35□□□□□ -2.03
PTPN4-205ENST00000433888 C10orf88Q9H8K7 445 aa2.35□□□□□ -2.03
PTPN4-205ENST00000433888 SP140LQ9H930 580 aa2.35□□□□□ -2.03
PTPN4-205ENST00000433888 TAS2R3Q9NYW6 316 aa2.35□□□□□ -2.03
PTPN4-205ENST00000433888 COPS7AQ9UBW8 275 aa2.35□□□□□ -2.03
PTPN4-205ENST00000433888 MOKQ9UQ07 419 aa2.35□□□□□ -2.03
PTPN4-205ENST00000433888 SH3GLB1Q9Y371 365 aa2.35□□□□□ -2.03
PTPN4-205ENST00000433888 ATG4BQ9Y4P1 393 aa2.35□□□□□ -2.03
PTPN4-205ENST00000433888 TRAV18A0A075B6X5 111 aa2.34□□□□□ -2.03
PTPN4-205ENST00000433888 TMEM89A2RUT3 159 aa2.34□□□□□ -2.03
PTPN4-205ENST00000433888 ARHGAP42A6NI28 874 aa2.34□□□□□ -2.03
PTPN4-205ENST00000433888 SLC9B1P1A6NJY1 282 aa2.34□□□□□ -2.03
PTPN4-205ENST00000433888 ZNF487B1APH4 448 aa2.34□□□□□ -2.03
PTPN4-205ENST00000433888 RSPH10B2B2RC85 870 aa2.34□□□□□ -2.03
PTPN4-205ENST00000433888 TNFSF11O14788 317 aa2.34□□□□□ -2.03
PTPN4-205ENST00000433888 CPLX1O14810 134 aa2.34□□□□□ -2.03
PTPN4-205ENST00000433888 RHBDL1O75783 438 aa2.34□□□□□ -2.03
PTPN4-205ENST00000433888 GAS8O95995 478 aa2.34□□□□□ -2.03
PTPN4-205ENST00000433888 PTMAP06454 111 aaKnown RBP2.34□□□□□ -2.03
PTPN4-205ENST00000433888 HEXBP07686 556 aa2.34□□□□□ -2.03
PTPN4-205ENST00000433888 RSPH10BP0C881 870 aa2.34□□□□□ -2.03
PTPN4-205ENST00000433888 CYP11B1P15538 503 aa2.34□□□□□ -2.03
PTPN4-205ENST00000433888 FUT1P19526 365 aa2.34□□□□□ -2.03
PTPN4-205ENST00000433888 BRCC3P46736 316 aa2.34□□□□□ -2.03
PTPN4-205ENST00000433888 TNFSF10P50591 281 aa2.34□□□□□ -2.03
PTPN4-205ENST00000433888 TKTL1P51854 596 aa2.34□□□□□ -2.03
PTPN4-205ENST00000433888 BACE1P56817 501 aa2.34□□□□□ -2.03
PTPN4-205ENST00000433888 NLRP11P59045 1033 aaKnown RBP2.34□□□□□ -2.03
PTPN4-205ENST00000433888 RPS27AP62979 156 aaKnown RBP2.34□□□□□ -2.03
PTPN4-205ENST00000433888 HTD2P86397 168 aa2.34□□□□□ -2.03
PTPN4-205ENST00000433888 SPP2Q13103 211 aa2.34□□□□□ -2.03
PTPN4-205ENST00000433888 TGIF1Q15583 401 aa2.34□□□□□ -2.03
PTPN4-205ENST00000433888 CARTPTQ16568 116 aa2.34□□□□□ -2.03
PTPN4-205ENST00000433888 GSG1Q2KHT4 349 aa2.34□□□□□ -2.03
PTPN4-205ENST00000433888 CCDC40Q4G0X9 1142 aa2.34□□□□□ -2.03
PTPN4-205ENST00000433888 SULT1C3Q6IMI6 304 aa2.34□□□□□ -2.03
PTPN4-205ENST00000433888 KLHL10Q6JEL2 608 aa2.34□□□□□ -2.03
PTPN4-205ENST00000433888 ZNF544Q6NX49 715 aa2.34□□□□□ -2.03
PTPN4-205ENST00000433888 ARMCX2Q7L311 632 aa2.34□□□□□ -2.03
PTPN4-205ENST00000433888 BNIPLQ7Z465 357 aa2.34□□□□□ -2.03
PTPN4-205ENST00000433888 GPR141Q7Z602 305 aa2.34□□□□□ -2.03
PTPN4-205ENST00000433888 TBC1D10CQ8IV04 446 aa2.34□□□□□ -2.03
PTPN4-205ENST00000433888 SIAH3Q8IW03 269 aa2.34□□□□□ -2.03
PTPN4-205ENST00000433888 ARL6IP6Q8N6S5 226 aa2.34□□□□□ -2.03
PTPN4-205ENST00000433888 ZNF781Q8N8C0 355 aa2.34□□□□□ -2.03
PTPN4-205ENST00000433888 CNNM3Q8NE01 707 aa2.34□□□□□ -2.03
PTPN4-205ENST00000433888 ZNF564Q8TBZ8 553 aaPredicted RBP2.34□□□□□ -2.03
PTPN4-205ENST00000433888 CKAP2Q8WWK9 683 aa2.34□□□□□ -2.03
PTPN4-205ENST00000433888 HAS2Q92819 552 aa2.34□□□□□ -2.03
PTPN4-205ENST00000433888 SYAP1Q96A49 352 aaPredicted RBP2.34□□□□□ -2.03
PTPN4-205ENST00000433888 MRPL38Q96DV4 380 aaKnown RBP2.34□□□□□ -2.03
PTPN4-205ENST00000433888 MRPL53Q96EL3 112 aaKnown RBP2.34□□□□□ -2.03
PTPN4-205ENST00000433888 NSMCE2Q96MF7 247 aa2.34□□□□□ -2.03
PTPN4-205ENST00000433888 ANKRD27Q96NW4 1050 aa2.34□□□□□ -2.03
PTPN4-205ENST00000433888 PRMT1Q99873 361 aaKnown RBP2.34□□□□□ -2.03
PTPN4-205ENST00000433888 C17orf62Q9BQA9 187 aa2.34□□□□□ -2.03
PTPN4-205ENST00000433888 ZNF446Q9NWS9 450 aa2.34□□□□□ -2.03
PTPN4-205ENST00000433888 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.34□□□□□ -2.03
PTPN4-205ENST00000433888 HMG20BQ9P0W2 317 aa2.34□□□□□ -2.03
PTPN4-205ENST00000433888 RPS6KB2Q9UBS0 482 aa2.34□□□□□ -2.03
PTPN4-205ENST00000433888 FAM153AQ9UHL3 310 aa2.34□□□□□ -2.03
PTPN4-205ENST00000433888 MAD2L2Q9UI95 211 aa2.34□□□□□ -2.03
PTPN4-205ENST00000433888 DNPEPQ9ULA0 475 aa2.34□□□□□ -2.03
PTPN4-205ENST00000433888 FBXO7Q9Y3I1 522 aa2.34□□□□□ -2.03
PTPN4-205ENST00000433888 ZNF732B4DXR9 585 aa2.33□□□□□ -2.04
PTPN4-205ENST00000433888 TMEM150CB9EJG8 249 aa2.33□□□□□ -2.04
PTPN4-205ENST00000433888 SLC28A1O00337 649 aa2.33□□□□□ -2.04
PTPN4-205ENST00000433888 LANCL1O43813 399 aa2.33□□□□□ -2.04
PTPN4-205ENST00000433888 SCGB2A1O75556 95 aa2.33□□□□□ -2.04
PTPN4-205ENST00000433888 RAD51DO75771 328 aa2.33□□□□□ -2.04
PTPN4-205ENST00000433888 TSPY4P0CV99 314 aa2.33□□□□□ -2.04
PTPN4-205ENST00000433888 TSPY10P0CW01 314 aa2.33□□□□□ -2.04
PTPN4-205ENST00000433888 SLC1A6P48664 564 aa2.33□□□□□ -2.04
PTPN4-205ENST00000433888 ZNF133P52736 654 aaPredicted RBP2.33□□□□□ -2.04
PTPN4-205ENST00000433888 HERV-K104P63124 156 aa2.33□□□□□ -2.04
PTPN4-205ENST00000433888 PRKCEQ02156 737 aa2.33□□□□□ -2.04
PTPN4-205ENST00000433888 RBBP4Q09028 425 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms