RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 SLC39A1Q9NY26 324 aa17.06■□□□□ 0.32
HMGN1-206ENST00000431390 FAF1Q9UNN5 650 aaPredicted RBP17.06■□□□□ 0.32
HMGN1-206ENST00000431390 CXCR6O00574 342 aa17.05■□□□□ 0.32
HMGN1-206ENST00000431390 PLOD3O60568 738 aa17.05■□□□□ 0.32
HMGN1-206ENST00000431390 CSO75390 466 aaKnown RBP17.05■□□□□ 0.32
HMGN1-206ENST00000431390 JRKO75564 520 aa17.05■□□□□ 0.32
HMGN1-206ENST00000431390 NCK1P16333 377 aa17.05■□□□□ 0.32
HMGN1-206ENST00000431390 PTGER1P34995 402 aa17.05■□□□□ 0.32
HMGN1-206ENST00000431390 SOX11P35716 441 aa17.05■□□□□ 0.32
HMGN1-206ENST00000431390 STT3AP46977 705 aa17.05■□□□□ 0.32
HMGN1-206ENST00000431390 ANXA11P50995 505 aaKnown RBP17.05■□□□□ 0.32
HMGN1-206ENST00000431390 DSTNP60981 165 aa17.05■□□□□ 0.32
HMGN1-206ENST00000431390 RHDQ02161 417 aa17.05■□□□□ 0.32
HMGN1-206ENST00000431390 EIF3IQ13347 325 aaKnown RBP17.05■□□□□ 0.32
HMGN1-206ENST00000431390 FHL5Q5TD97 284 aa17.05■□□□□ 0.32
HMGN1-206ENST00000431390 SZRD1Q7Z422 152 aa17.05■□□□□ 0.32
HMGN1-206ENST00000431390 GALNT15Q8N3T1 639 aa17.05■□□□□ 0.32
HMGN1-206ENST00000431390 MIPOL1Q8TD10 442 aa17.05■□□□□ 0.32
HMGN1-206ENST00000431390 CTHRC1Q96CG8 243 aa17.05■□□□□ 0.32
HMGN1-206ENST00000431390 RBM18Q96H35 190 aaKnown RBP17.05■□□□□ 0.32
HMGN1-206ENST00000431390 MAGED4Q96JG8 741 aa17.05■□□□□ 0.32
HMGN1-206ENST00000431390 NSMCE2Q96MF7 247 aa17.05■□□□□ 0.32
HMGN1-206ENST00000431390 DGAT2Q96PD7 388 aa17.05■□□□□ 0.32
HMGN1-206ENST00000431390 RASSF4Q9H2L5 321 aa17.05■□□□□ 0.32
HMGN1-206ENST00000431390 C14orf105Q9NVL8 296 aa17.05■□□□□ 0.32
HMGN1-206ENST00000431390 DDX18Q9NVP1 670 aaKnown RBP17.05■□□□□ 0.32
HMGN1-206ENST00000431390 MAT2BQ9NZL9 334 aa17.05■□□□□ 0.32
HMGN1-206ENST00000431390 KIF26BQ2KJY2 2108 aa17.04■□□□□ 0.32
HMGN1-206ENST00000431390 IGKV3D-11A0A0A0MRZ8 115 aa17.04■□□□□ 0.32
HMGN1-206ENST00000431390 EIF4E1BA6NMX2 242 aaKnown RBP17.04■□□□□ 0.32
HMGN1-206ENST00000431390 UPK1AO00322 258 aa17.04■□□□□ 0.32
HMGN1-206ENST00000431390 MAOAP21397 527 aa17.04■□□□□ 0.32
HMGN1-206ENST00000431390 MATN1P21941 496 aa17.04■□□□□ 0.32
HMGN1-206ENST00000431390 PCGF2P35227 344 aa17.04■□□□□ 0.32
HMGN1-206ENST00000431390 SOX18P35713 384 aa17.04■□□□□ 0.32
HMGN1-206ENST00000431390 PRIM2P49643 509 aa17.04■□□□□ 0.32
HMGN1-206ENST00000431390 KHKP50053 298 aa17.04■□□□□ 0.32
HMGN1-206ENST00000431390 ERFP50548 548 aa17.04■□□□□ 0.32
HMGN1-206ENST00000431390 MRPS35P82673 323 aaKnown RBP17.04■□□□□ 0.32
HMGN1-206ENST00000431390 MGAT2Q10469 447 aa17.04■□□□□ 0.32
HMGN1-206ENST00000431390 MAP4K2Q12851 820 aa17.04■□□□□ 0.32
HMGN1-206ENST00000431390 CAMK2BQ13554 666 aa17.04■□□□□ 0.32
HMGN1-206ENST00000431390 ZNF630Q2M218 657 aaPredicted RBP17.04■□□□□ 0.32
HMGN1-206ENST00000431390 ZFP1Q6P2D0 407 aa17.04■□□□□ 0.32
HMGN1-206ENST00000431390 DHRS13Q6UX07 377 aa17.04■□□□□ 0.32
HMGN1-206ENST00000431390 RAB11FIP2Q7L804 512 aa17.04■□□□□ 0.32
HMGN1-206ENST00000431390 SPPL2CQ8IUH8 684 aa17.04■□□□□ 0.32
HMGN1-206ENST00000431390 HORMAD2Q8N7B1 307 aa17.04■□□□□ 0.32
HMGN1-206ENST00000431390 FIG4Q92562 907 aa17.04■□□□□ 0.32
HMGN1-206ENST00000431390 POP5Q969H6 163 aaKnown RBP17.04■□□□□ 0.32
HMGN1-206ENST00000431390 DUS3LQ96G46 650 aaKnown RBP17.04■□□□□ 0.32
HMGN1-206ENST00000431390 RSRC1Q96IZ7 334 aaKnown RBP17.04■□□□□ 0.32
HMGN1-206ENST00000431390 PTCHD1Q96NR3 888 aa17.04■□□□□ 0.32
HMGN1-206ENST00000431390 MS4A4EQ96PG1 132 aa17.04■□□□□ 0.32
HMGN1-206ENST00000431390 ZPBPQ9BS86 351 aa17.04■□□□□ 0.32
HMGN1-206ENST00000431390 NECTIN3Q9NQS3 549 aa17.04■□□□□ 0.32
HMGN1-206ENST00000431390 C19orf53Q9UNZ5 99 aaPredicted RBP17.04■□□□□ 0.32
HMGN1-206ENST00000431390 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.03■□□□□ 0.32
HMGN1-206ENST00000431390 MEN1O00255 615 aa17.03■□□□□ 0.32
HMGN1-206ENST00000431390 CREG1O75629 220 aa17.03■□□□□ 0.32
HMGN1-206ENST00000431390 KRT36O76013 467 aa17.03■□□□□ 0.32
HMGN1-206ENST00000431390 HMGN2P05204 90 aaKnown RBP17.03■□□□□ 0.32
HMGN1-206ENST00000431390 NUDT7P0C024 238 aa17.03■□□□□ 0.32
HMGN1-206ENST00000431390 ARAFP10398 606 aa17.03■□□□□ 0.32
HMGN1-206ENST00000431390 AGXTP21549 392 aa17.03■□□□□ 0.32
HMGN1-206ENST00000431390 PRKAG1P54619 331 aa17.03■□□□□ 0.32
HMGN1-206ENST00000431390 CASP9P55211 416 aa17.03■□□□□ 0.32
HMGN1-206ENST00000431390 RHAGQ02094 409 aa17.03■□□□□ 0.32
HMGN1-206ENST00000431390 OCA2Q04671 838 aa17.03■□□□□ 0.32
HMGN1-206ENST00000431390 MINDY4Q4G0A6 757 aa17.03■□□□□ 0.32
HMGN1-206ENST00000431390 VWA2Q5GFL6 755 aa17.03■□□□□ 0.32
HMGN1-206ENST00000431390 DCAF12Q5T6F0 453 aa17.03■□□□□ 0.32
HMGN1-206ENST00000431390 HES3Q5TGS1 186 aa17.03■□□□□ 0.32
HMGN1-206ENST00000431390 FAM111BQ6SJ93 734 aa17.03■□□□□ 0.32
HMGN1-206ENST00000431390 OVCH1Q7RTY7 1134 aa17.03■□□□□ 0.32
HMGN1-206ENST00000431390 SLC30A8Q8IWU4 369 aa17.03■□□□□ 0.32
HMGN1-206ENST00000431390 GALNT12Q8IXK2 581 aa17.03■□□□□ 0.32
HMGN1-206ENST00000431390 FKBP10Q96AY3 582 aa17.03■□□□□ 0.32
HMGN1-206ENST00000431390 PPWD1Q96BP3 646 aaKnown RBP17.03■□□□□ 0.32
HMGN1-206ENST00000431390 GIMAP5Q96F15 307 aa17.03■□□□□ 0.32
HMGN1-206ENST00000431390 ZNF578Q96N58 590 aaPredicted RBP17.03■□□□□ 0.32
HMGN1-206ENST00000431390 SERHL2Q9H4I8 314 aa17.03■□□□□ 0.32
HMGN1-206ENST00000431390 CXorf21Q9HAI6 301 aa17.03■□□□□ 0.32
HMGN1-206ENST00000431390 RNPEPL1Q9HAU8 725 aa17.03■□□□□ 0.32
HMGN1-206ENST00000431390 S100A14Q9HCY8 104 aa17.03■□□□□ 0.32
HMGN1-206ENST00000431390 CTSFQ9UBX1 484 aa17.03■□□□□ 0.32
HMGN1-206ENST00000431390 GCN1Q92616 2671 aaKnown RBP17.03■□□□□ 0.32
HMGN1-206ENST00000431390 CCDC187A0A096LP49 1063 aa17.02■□□□□ 0.32
HMGN1-206ENST00000431390 MYOCOSA0A1B0GUC4 107 aa17.02■□□□□ 0.32
HMGN1-206ENST00000431390 ASNA1O43681 348 aa17.02■□□□□ 0.32
HMGN1-206ENST00000431390 ZIC2O95409 532 aaPredicted RBP17.02■□□□□ 0.32
HMGN1-206ENST00000431390 ALBP02768 609 aa17.02■□□□□ 0.32
HMGN1-206ENST00000431390 UMPSP11172 480 aa17.02■□□□□ 0.32
HMGN1-206ENST00000431390 RPS26P62854 115 aaKnown RBP17.02■□□□□ 0.32
HMGN1-206ENST00000431390 AP2B1P63010 937 aa17.02■□□□□ 0.32
HMGN1-206ENST00000431390 MRPS22P82650 360 aaKnown RBP17.02■□□□□ 0.32
HMGN1-206ENST00000431390 LASP1Q14847 261 aaKnown RBP17.02■□□□□ 0.32
HMGN1-206ENST00000431390 TRMT12Q53H54 448 aaKnown RBP17.02■□□□□ 0.32
HMGN1-206ENST00000431390 MFSD4BQ5TF39 518 aa17.02■□□□□ 0.32
HMGN1-206ENST00000431390 TNFAIP8L2Q6P589 184 aaPredicted RBP17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms