RNA–Protein interactions for RNA: ENST00000431387.8

NF1-204, Transcript of neurofibromin 1, humanhuman

TSL 1 (best) BASIC

Gene NF1, Length 2,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-204ENST00000431387 NRSN1Q8IZ57 195 aa12.85□□□□□ -0.35
NF1-204ENST00000431387 SLC37A3Q8NCC5 494 aa12.85□□□□□ -0.35
NF1-204ENST00000431387 MSLNLQ96KJ4 702 aa12.85□□□□□ -0.35
NF1-204ENST00000431387 COQ10AQ96MF6 247 aa12.85□□□□□ -0.35
NF1-204ENST00000431387 WACQ9BTA9 647 aa12.85□□□□□ -0.35
NF1-204ENST00000431387 ACAT2Q9BWD1 397 aa12.85□□□□□ -0.35
NF1-204ENST00000431387 CFHR5Q9BXR6 569 aa12.85□□□□□ -0.35
NF1-204ENST00000431387 RSPO3Q9BXY4 272 aaPredicted RBP12.85□□□□□ -0.35
NF1-204ENST00000431387 RACGAP1Q9H0H5 632 aa12.85□□□□□ -0.35
NF1-204ENST00000431387 EPHX3Q9H6B9 360 aa12.85□□□□□ -0.35
NF1-204ENST00000431387 MKI67P46013 3256 aaKnown RBP12.85□□□□□ -0.35
NF1-204ENST00000431387 ISM1B1AKI9 464 aa12.84□□□□□ -0.35
NF1-204ENST00000431387 SHOXO15266 292 aa12.84□□□□□ -0.35
NF1-204ENST00000431387 FABP7O15540 132 aa12.84□□□□□ -0.35
NF1-204ENST00000431387 UQCRC2P22695 453 aa12.84□□□□□ -0.35
NF1-204ENST00000431387 ETV5P41161 510 aa12.84□□□□□ -0.35
NF1-204ENST00000431387 ETV1P50549 477 aa12.84□□□□□ -0.35
NF1-204ENST00000431387 AP2S1P53680 142 aaPredicted RBP12.84□□□□□ -0.35
NF1-204ENST00000431387 RRAS2P62070 204 aaPredicted RBP12.84□□□□□ -0.35
NF1-204ENST00000431387 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.84□□□□□ -0.35
NF1-204ENST00000431387 IL18Q14116 193 aa12.84□□□□□ -0.35
NF1-204ENST00000431387 ZNF267Q14586 743 aaPredicted RBP12.84□□□□□ -0.35
NF1-204ENST00000431387 SEC23BQ15437 767 aa12.84□□□□□ -0.35
NF1-204ENST00000431387 CRTC2Q53ET0 693 aaPredicted RBP12.84□□□□□ -0.35
NF1-204ENST00000431387 FAAH2Q6GMR7 532 aa12.84□□□□□ -0.35
NF1-204ENST00000431387 TNFAIP8L2Q6P589 184 aaPredicted RBP12.84□□□□□ -0.35
NF1-204ENST00000431387 B3GLCTQ6Y288 498 aa12.84□□□□□ -0.35
NF1-204ENST00000431387 SHFQ7M4L6 423 aa12.84□□□□□ -0.35
NF1-204ENST00000431387 ZNF547Q8IVP9 402 aa12.84□□□□□ -0.35
NF1-204ENST00000431387 HORMAD2Q8N7B1 307 aa12.84□□□□□ -0.35
NF1-204ENST00000431387 NANOGP1Q8N7R0 232 aa12.84□□□□□ -0.35
NF1-204ENST00000431387 C7orf57Q8NEG2 295 aa12.84□□□□□ -0.35
NF1-204ENST00000431387 NRTNQ99748 197 aa12.84□□□□□ -0.35
NF1-204ENST00000431387 MND1Q9BWT6 205 aa12.84□□□□□ -0.35
NF1-204ENST00000431387 NLNQ9BYT8 704 aa12.84□□□□□ -0.35
NF1-204ENST00000431387 MCOLN1Q9GZU1 580 aa12.84□□□□□ -0.35
NF1-204ENST00000431387 ABCG4Q9H172 646 aa12.84□□□□□ -0.35
NF1-204ENST00000431387 SLAMF7Q9NQ25 335 aa12.84□□□□□ -0.35
NF1-204ENST00000431387 RBFOX1Q9NWB1 397 aaKnown RBP12.84□□□□□ -0.35
NF1-204ENST00000431387 TBX21Q9UL17 535 aa12.84□□□□□ -0.35
NF1-204ENST00000431387 ALPK3Q96L96 1907 aa12.84□□□□□ -0.35
NF1-204ENST00000431387 RTCAO00442 366 aaKnown RBP12.84□□□□□ -0.35
NF1-204ENST00000431387 BTN3A3O00478 584 aa12.84□□□□□ -0.35
NF1-204ENST00000431387 LYRM1O43325 122 aa12.84□□□□□ -0.35
NF1-204ENST00000431387 PDE9AO76083 593 aa12.84□□□□□ -0.35
NF1-204ENST00000431387 BCHEP06276 602 aa12.84□□□□□ -0.35
NF1-204ENST00000431387 TNNI3P19429 210 aa12.84□□□□□ -0.35
NF1-204ENST00000431387 NUDT1P36639 197 aa12.84□□□□□ -0.35
NF1-204ENST00000431387 OPRD1P41143 372 aa12.84□□□□□ -0.35
NF1-204ENST00000431387 AVPR1BP47901 424 aa12.84□□□□□ -0.35
NF1-204ENST00000431387 AGFG1P52594 562 aaKnown RBP12.84□□□□□ -0.35
NF1-204ENST00000431387 CTBP2P56545 445 aa12.84□□□□□ -0.35
NF1-204ENST00000431387 POU4F3Q15319 338 aa12.84□□□□□ -0.35
NF1-204ENST00000431387 ZNF77Q15935 545 aa12.84□□□□□ -0.35
NF1-204ENST00000431387 REEP3Q6NUK4 255 aa12.84□□□□□ -0.35
NF1-204ENST00000431387 C9orf62Q8N4C0 152 aa12.84□□□□□ -0.35
NF1-204ENST00000431387 ZNF296Q8WUU4 475 aaPredicted RBP12.84□□□□□ -0.35
NF1-204ENST00000431387 SLC38A5Q8WUX1 472 aa12.84□□□□□ -0.35
NF1-204ENST00000431387 ZSWIM3Q96MP5 696 aa12.84□□□□□ -0.35
NF1-204ENST00000431387 DCLRE1CQ96SD1 692 aaKnown RBP12.84□□□□□ -0.35
NF1-204ENST00000431387 PAK6Q9NQU5 681 aaPredicted RBP12.84□□□□□ -0.35
NF1-204ENST00000431387 TVP23BQ9NYZ1 205 aa12.84□□□□□ -0.35
NF1-204ENST00000431387 POLHQ9Y253 713 aa12.84□□□□□ -0.35
NF1-204ENST00000431387 HEPACAM2A8MVW5 462 aa12.83□□□□□ -0.35
NF1-204ENST00000431387 TLX2O43763 284 aaPredicted RBP12.83□□□□□ -0.35
NF1-204ENST00000431387 SEMA7AO75326 666 aa12.83□□□□□ -0.35
NF1-204ENST00000431387 POP7O75817 140 aaKnown RBP12.83□□□□□ -0.35
NF1-204ENST00000431387 PDGFAP04085 211 aa12.83□□□□□ -0.35
NF1-204ENST00000431387 POLR2CP19387 275 aaPredicted RBP12.83□□□□□ -0.35
NF1-204ENST00000431387 M6PRP20645 277 aa12.83□□□□□ -0.35
NF1-204ENST00000431387 ABATP80404 500 aa12.83□□□□□ -0.35
NF1-204ENST00000431387 MRPL28Q13084 256 aaKnown RBP12.83□□□□□ -0.35
NF1-204ENST00000431387 MAB21L1Q13394 359 aa12.83□□□□□ -0.35
NF1-204ENST00000431387 RAET1GQ6H3X3 334 aa12.83□□□□□ -0.35
NF1-204ENST00000431387 ANKRD54Q6NXT1 300 aa12.83□□□□□ -0.35
NF1-204ENST00000431387 UNC5DQ6UXZ4 953 aa12.83□□□□□ -0.35
NF1-204ENST00000431387 SLC9B2Q86UD5 537 aa12.83□□□□□ -0.35
NF1-204ENST00000431387 TRIM69Q86WT6 500 aa12.83□□□□□ -0.35
NF1-204ENST00000431387 MEX3DQ86XN8 651 aaKnown RBP12.83□□□□□ -0.35
NF1-204ENST00000431387 DNAJC5GQ8N7S2 189 aa12.83□□□□□ -0.35
NF1-204ENST00000431387 APOBEC4Q8WW27 367 aaKnown RBP12.83□□□□□ -0.35
NF1-204ENST00000431387 GATAD2BQ8WXI9 593 aa12.83□□□□□ -0.35
NF1-204ENST00000431387 RAB8BQ92930 207 aa12.83□□□□□ -0.35
NF1-204ENST00000431387 PDXPQ96GD0 296 aa12.83□□□□□ -0.35
NF1-204ENST00000431387 MSANTD3Q96H12 275 aa12.83□□□□□ -0.35
NF1-204ENST00000431387 LRIG1Q96JA1 1093 aa12.83□□□□□ -0.35
NF1-204ENST00000431387 CDCP1Q9H5V8 836 aa12.83□□□□□ -0.35
NF1-204ENST00000431387 ANKRA2Q9H9E1 313 aa12.83□□□□□ -0.35
NF1-204ENST00000431387 KCND3Q9UK17 655 aa12.83□□□□□ -0.35
NF1-204ENST00000431387 PRKAB1Q9Y478 270 aa12.83□□□□□ -0.35
NF1-204ENST00000431387 HIDE1A8MVS5 230 aa12.83□□□□□ -0.36
NF1-204ENST00000431387 MPZL2O60487 215 aa12.83□□□□□ -0.36
NF1-204ENST00000431387 CD79BP40259 229 aa12.83□□□□□ -0.36
NF1-204ENST00000431387 GPR1P46091 355 aa12.83□□□□□ -0.36
NF1-204ENST00000431387 NTHL1P78549 312 aa12.83□□□□□ -0.36
NF1-204ENST00000431387 LSM11P83369 360 aaKnown RBP eCLIP12.83□□□□□ -0.36
NF1-204ENST00000431387 PRAMEF14Q5SWL7 426 aa12.83□□□□□ -0.36
NF1-204ENST00000431387 PRAMEF13Q5VWM6 474 aa12.83□□□□□ -0.36
NF1-204ENST00000431387 GDPGP1Q6ZNW5 385 aa12.83□□□□□ -0.36
NF1-204ENST00000431387 FAM83HQ6ZRV2 1179 aaPredicted RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms