RNA–Protein interactions for RNA: ENST00000429416.7

SMARCA4-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2 BASIC

Gene SMARCA4, Length 5,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-203ENST00000429416 ZNF440Q8IYI8 595 aa16.2■□□□□ 0.18
SMARCA4-203ENST00000429416 OR5B2Q96R09 309 aa16.2■□□□□ 0.18
SMARCA4-203ENST00000429416 POLR2J2Q9GZM3 115 aaKnown RBP16.2■□□□□ 0.18
SMARCA4-203ENST00000429416 YY2O15391 372 aa16.19■□□□□ 0.18
SMARCA4-203ENST00000429416 GPLD1P80108 840 aa16.19■□□□□ 0.18
SMARCA4-203ENST00000429416 TXNL4AP83876 142 aaKnown RBP16.19■□□□□ 0.18
SMARCA4-203ENST00000429416 ALG10BQ5I7T1 473 aa16.19■□□□□ 0.18
SMARCA4-203ENST00000429416 C1orf210Q8IVY1 113 aa16.19■□□□□ 0.18
SMARCA4-203ENST00000429416 ZNF611Q8N823 705 aa16.19■□□□□ 0.18
SMARCA4-203ENST00000429416 TMEM19Q96HH6 336 aa16.19■□□□□ 0.18
SMARCA4-203ENST00000429416 BRF2Q9HAW0 419 aa16.19■□□□□ 0.18
SMARCA4-203ENST00000429416 KLHL42Q9P2K6 505 aa16.19■□□□□ 0.18
SMARCA4-203ENST00000429416 CASP8AP2Q9UKL3 1982 aa16.19■□□□□ 0.18
SMARCA4-203ENST00000429416 J3QLW9 94 aa16.19■□□□□ 0.18
SMARCA4-203ENST00000429416 HTRA2O43464 458 aaPredicted RBP16.19■□□□□ 0.18
SMARCA4-203ENST00000429416 ZNF19P17023 458 aa16.19■□□□□ 0.18
SMARCA4-203ENST00000429416 DCDC1P59894 354 aa16.19■□□□□ 0.18
SMARCA4-203ENST00000429416 RNF175Q8N4F7 328 aa16.19■□□□□ 0.18
SMARCA4-203ENST00000429416 CHCHD4Q8N4Q1 142 aa16.19■□□□□ 0.18
SMARCA4-203ENST00000429416 UFD1Q92890 307 aa16.19■□□□□ 0.18
SMARCA4-203ENST00000429416 NODALQ96S42 347 aa16.19■□□□□ 0.18
SMARCA4-203ENST00000429416 MRPS26Q9BYN8 205 aaKnown RBP16.19■□□□□ 0.18
SMARCA4-203ENST00000429416 HMG20AQ9NP66 347 aa16.19■□□□□ 0.18
SMARCA4-203ENST00000429416 KNTC1P50748 2209 aa16.19■□□□□ 0.18
SMARCA4-203ENST00000429416 SLC15A1P46059 708 aa16.19■□□□□ 0.18
SMARCA4-203ENST00000429416 RBBP4Q09028 425 aa16.19■□□□□ 0.18
SMARCA4-203ENST00000429416 GTF2IRD2BQ6EKJ0 949 aa16.19■□□□□ 0.18
SMARCA4-203ENST00000429416 HMBOX1Q6NT76 420 aa16.19■□□□□ 0.18
SMARCA4-203ENST00000429416 GTF2IRD2Q86UP8 949 aa16.19■□□□□ 0.18
SMARCA4-203ENST00000429416 DDIT4LQ96D03 193 aa16.19■□□□□ 0.18
SMARCA4-203ENST00000429416 PDCD10Q9BUL8 212 aa16.19■□□□□ 0.18
SMARCA4-203ENST00000429416 EURLQ9NYK6 297 aa16.19■□□□□ 0.18
SMARCA4-203ENST00000429416 MTCH2Q9Y6C9 303 aa16.19■□□□□ 0.18
SMARCA4-203ENST00000429416 NUDT6P53370 316 aa16.19■□□□□ 0.18
SMARCA4-203ENST00000429416 CDH11P55287 796 aa16.19■□□□□ 0.18
SMARCA4-203ENST00000429416 GALK2Q01415 458 aa16.19■□□□□ 0.18
SMARCA4-203ENST00000429416 HTR4Q13639 388 aa16.19■□□□□ 0.18
SMARCA4-203ENST00000429416 TYSND1Q2T9J0 566 aa16.19■□□□□ 0.18
SMARCA4-203ENST00000429416 MZT2BQ6NZ67 158 aa16.19■□□□□ 0.18
SMARCA4-203ENST00000429416 KLHL36Q8N4N3 616 aa16.19■□□□□ 0.18
SMARCA4-203ENST00000429416 OR4C15Q8NGM1 316 aa16.19■□□□□ 0.18
SMARCA4-203ENST00000429416 CLCC1Q96S66 551 aa16.19■□□□□ 0.18
SMARCA4-203ENST00000429416 UTP23Q9BRU9 249 aaKnown RBP16.19■□□□□ 0.18
SMARCA4-203ENST00000429416 B3GNT4Q9C0J1 378 aa16.19■□□□□ 0.18
SMARCA4-203ENST00000429416 SRA1Q9HD15 236 aaKnown RBP16.19■□□□□ 0.18
SMARCA4-203ENST00000429416 TBC1D29Q9UFV1 150 aa16.19■□□□□ 0.18
SMARCA4-203ENST00000429416 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.19■□□□□ 0.18
SMARCA4-203ENST00000429416 SIPA1L3O60292 1781 aaPredicted RBP16.19■□□□□ 0.18
SMARCA4-203ENST00000429416 TMEM221A6NGB7 291 aa16.19■□□□□ 0.18
SMARCA4-203ENST00000429416 M0R296 226 aa16.19■□□□□ 0.18
SMARCA4-203ENST00000429416 ITGA5P08648 1049 aa16.19■□□□□ 0.18
SMARCA4-203ENST00000429416 CBX5P45973 191 aa16.19■□□□□ 0.18
SMARCA4-203ENST00000429416 CCR5P51681 352 aa16.19■□□□□ 0.18
SMARCA4-203ENST00000429416 XIAPP98170 497 aa16.19■□□□□ 0.18
SMARCA4-203ENST00000429416 OPN5Q6U736 354 aa16.19■□□□□ 0.18
SMARCA4-203ENST00000429416 WDR53Q7Z5U6 358 aaPredicted RBP16.19■□□□□ 0.18
SMARCA4-203ENST00000429416 OR2L3Q8NG85 312 aa16.19■□□□□ 0.18
SMARCA4-203ENST00000429416 SNRNP27Q8WVK2 155 aaKnown RBP16.19■□□□□ 0.18
SMARCA4-203ENST00000429416 ZDHHC5Q9C0B5 715 aa16.19■□□□□ 0.18
SMARCA4-203ENST00000429416 GNG8Q9UK08 70 aa16.19■□□□□ 0.18
SMARCA4-203ENST00000429416 NME7Q9Y5B8 376 aa16.19■□□□□ 0.18
SMARCA4-203ENST00000429416 SOCS2O14508 198 aa16.18■□□□□ 0.18
SMARCA4-203ENST00000429416 NR4A1P22736 598 aa16.18■□□□□ 0.18
SMARCA4-203ENST00000429416 LIN54Q6MZP7 749 aa16.18■□□□□ 0.18
SMARCA4-203ENST00000429416 ARL9Q6T311 187 aa16.18■□□□□ 0.18
SMARCA4-203ENST00000429416 ZNF101Q8IZC7 436 aa16.18■□□□□ 0.18
SMARCA4-203ENST00000429416 ANKFN1Q8N957 763 aa16.18■□□□□ 0.18
SMARCA4-203ENST00000429416 COX4I2Q96KJ9 171 aa16.18■□□□□ 0.18
SMARCA4-203ENST00000429416 THSD1Q9NS62 852 aa16.18■□□□□ 0.18
SMARCA4-203ENST00000429416 VIRMAQ69YN4 1812 aaKnown RBP16.18■□□□□ 0.18
SMARCA4-203ENST00000429416 POLR2AP24928 1970 aaKnown RBP16.18■□□□□ 0.18
SMARCA4-203ENST00000429416 NPIPA5A0A0B4J1W7 369 aa16.18■□□□□ 0.18
SMARCA4-203ENST00000429416 NPIPA7E9PJI5 369 aa16.18■□□□□ 0.18
SMARCA4-203ENST00000429416 PPM1BO75688 479 aa16.18■□□□□ 0.18
SMARCA4-203ENST00000429416 NPIPA8P0DM63 369 aa16.18■□□□□ 0.18
SMARCA4-203ENST00000429416 ZNF43P17038 809 aa16.18■□□□□ 0.18
SMARCA4-203ENST00000429416 GABRG2P18507 467 aa16.18■□□□□ 0.18
SMARCA4-203ENST00000429416 DDCP20711 480 aa16.18■□□□□ 0.18
SMARCA4-203ENST00000429416 FPR1P21462 350 aa16.18■□□□□ 0.18
SMARCA4-203ENST00000429416 ECH1Q13011 328 aa16.18■□□□□ 0.18
SMARCA4-203ENST00000429416 OSTF1Q92882 214 aa16.18■□□□□ 0.18
SMARCA4-203ENST00000429416 TOR1BO14657 336 aa16.18■□□□□ 0.18
SMARCA4-203ENST00000429416 PSIP1O75475 530 aaKnown RBP16.18■□□□□ 0.18
SMARCA4-203ENST00000429416 MPLP40238 635 aa16.18■□□□□ 0.18
SMARCA4-203ENST00000429416 MAL2Q969L2 176 aa16.18■□□□□ 0.18
SMARCA4-203ENST00000429416 SGTBQ96EQ0 304 aa16.18■□□□□ 0.18
SMARCA4-203ENST00000429416 SEMA6CQ9H3T2 930 aa16.18■□□□□ 0.18
SMARCA4-203ENST00000429416 MTHFD2LQ9H903 347 aaPredicted RBP16.18■□□□□ 0.18
SMARCA4-203ENST00000429416 CAMK2AQ9UQM7 478 aa16.18■□□□□ 0.18
SMARCA4-203ENST00000429416 A6NLC8 198 aa16.18■□□□□ 0.18
SMARCA4-203ENST00000429416 ZNF749O43361 778 aa16.18■□□□□ 0.18
SMARCA4-203ENST00000429416 POU3F2P20265 443 aaPredicted RBP16.18■□□□□ 0.18
SMARCA4-203ENST00000429416 ADARP55265 1226 aaKnown RBP16.18■□□□□ 0.18
SMARCA4-203ENST00000429416 FOXA1P55317 472 aa16.18■□□□□ 0.18
SMARCA4-203ENST00000429416 TSPAN5P62079 268 aa16.18■□□□□ 0.18
SMARCA4-203ENST00000429416 SEMA3BQ13214 749 aa16.18■□□□□ 0.18
SMARCA4-203ENST00000429416 MPP2Q14168 576 aa16.18■□□□□ 0.18
SMARCA4-203ENST00000429416 C11orf24Q96F05 449 aaPredicted RBP16.18■□□□□ 0.18
SMARCA4-203ENST00000429416 FRMD6Q96NE9 622 aa16.18■□□□□ 0.18
SMARCA4-203ENST00000429416 A0A1B0GVI7 797 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms