RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 ST13P4Q8IZP2 240 aaPredicted RBP8.29□□□□□ -1.08
SMC6-204ENST00000428868 LILRA2Q8N149 483 aa8.29□□□□□ -1.08
SMC6-204ENST00000428868 OR2L13Q8N349 312 aa8.29□□□□□ -1.08
SMC6-204ENST00000428868 ANKFN1Q8N957 763 aa8.29□□□□□ -1.08
SMC6-204ENST00000428868 GALNT6Q8NCL4 622 aa8.29□□□□□ -1.08
SMC6-204ENST00000428868 OR56A1Q8NGH5 318 aa8.29□□□□□ -1.08
SMC6-204ENST00000428868 STT3BQ8TCJ2 826 aa8.29□□□□□ -1.08
SMC6-204ENST00000428868 ZNF675Q8TD23 568 aa8.29□□□□□ -1.08
SMC6-204ENST00000428868 ADAMTS18Q8TE60 1221 aa8.29□□□□□ -1.08
SMC6-204ENST00000428868 CANT1Q8WVQ1 401 aa8.29□□□□□ -1.08
SMC6-204ENST00000428868 NCLNQ969V3 563 aa8.29□□□□□ -1.08
SMC6-204ENST00000428868 CTHRC1Q96CG8 243 aa8.29□□□□□ -1.08
SMC6-204ENST00000428868 LIN37Q96GY3 246 aaPredicted RBP8.29□□□□□ -1.08
SMC6-204ENST00000428868 OR1F2PQ96R84 312 aa8.29□□□□□ -1.08
SMC6-204ENST00000428868 OR7D2Q96RA2 312 aa8.29□□□□□ -1.08
SMC6-204ENST00000428868 RUBCNLQ9H714 662 aa8.29□□□□□ -1.08
SMC6-204ENST00000428868 CXorf21Q9HAI6 301 aa8.29□□□□□ -1.08
SMC6-204ENST00000428868 CLK4Q9HAZ1 481 aaKnown RBP8.29□□□□□ -1.08
SMC6-204ENST00000428868 FBXO8Q9NRD0 319 aa8.29□□□□□ -1.08
SMC6-204ENST00000428868 SEMA3GQ9NS98 782 aa8.29□□□□□ -1.08
SMC6-204ENST00000428868 NTMQ9P121 344 aa8.29□□□□□ -1.08
SMC6-204ENST00000428868 ZNF639Q9UID6 485 aa8.29□□□□□ -1.08
SMC6-204ENST00000428868 MAGEL2Q9UJ55 1249 aa8.29□□□□□ -1.08
SMC6-204ENST00000428868 CDC14AQ9UNH5 594 aa8.29□□□□□ -1.08
SMC6-204ENST00000428868 MRPS33Q9Y291 106 aaKnown RBP8.29□□□□□ -1.08
SMC6-204ENST00000428868 PCDHGA1Q9Y5H4 931 aa8.29□□□□□ -1.08
SMC6-204ENST00000428868 CNOT1A5YKK6 2376 aaKnown RBP8.28□□□□□ -1.08
SMC6-204ENST00000428868 TCRBV16S1A1N1A0A5B0 115 aa8.28□□□□□ -1.08
SMC6-204ENST00000428868 MEN1O00255 615 aa8.28□□□□□ -1.08
SMC6-204ENST00000428868 TM4SF5O14894 197 aa8.28□□□□□ -1.08
SMC6-204ENST00000428868 PRKNO60260 465 aaPredicted RBP8.28□□□□□ -1.08
SMC6-204ENST00000428868 OR10H2O60403 315 aa8.28□□□□□ -1.08
SMC6-204ENST00000428868 ZIC2O95409 532 aaPredicted RBP8.28□□□□□ -1.08
SMC6-204ENST00000428868 ONECUT2O95948 504 aa8.28□□□□□ -1.08
SMC6-204ENST00000428868 SERPINA1P01009 418 aa8.28□□□□□ -1.08
SMC6-204ENST00000428868 BCHEP06276 602 aa8.28□□□□□ -1.08
SMC6-204ENST00000428868 ZGLP1P0C6A0 271 aa8.28□□□□□ -1.08
SMC6-204ENST00000428868 STT3AP46977 705 aa8.28□□□□□ -1.08
SMC6-204ENST00000428868 KHKP50053 298 aa8.28□□□□□ -1.08
SMC6-204ENST00000428868 PGDP52209 483 aa8.28□□□□□ -1.08
SMC6-204ENST00000428868 DCDP81605 110 aaKnown RBP8.28□□□□□ -1.08
SMC6-204ENST00000428868 VAC14Q08AM6 782 aa8.28□□□□□ -1.08
SMC6-204ENST00000428868 SCARB2Q14108 478 aa8.28□□□□□ -1.08
SMC6-204ENST00000428868 ZNF267Q14586 743 aaPredicted RBP8.28□□□□□ -1.08
SMC6-204ENST00000428868 IL11RAQ14626 422 aa8.28□□□□□ -1.08
SMC6-204ENST00000428868 LRRC23Q53EV4 343 aaPredicted RBP8.28□□□□□ -1.08
SMC6-204ENST00000428868 C3orf38Q5JPI3 329 aa8.28□□□□□ -1.08
SMC6-204ENST00000428868 HMBOX1Q6NT76 420 aa8.28□□□□□ -1.08
SMC6-204ENST00000428868 MED25Q71SY5 747 aa8.28□□□□□ -1.08
SMC6-204ENST00000428868 TIPARPQ7Z3E1 657 aaKnown RBP8.28□□□□□ -1.08
SMC6-204ENST00000428868 SLC44A2Q8IWA5 706 aaPredicted RBP8.28□□□□□ -1.08
SMC6-204ENST00000428868 GALNT12Q8IXK2 581 aa8.28□□□□□ -1.08
SMC6-204ENST00000428868 VWA5B2Q8N398 1253 aa8.28□□□□□ -1.08
SMC6-204ENST00000428868 ENDOVQ8N8Q3 282 aaKnown RBP8.28□□□□□ -1.08
SMC6-204ENST00000428868 SLC16A11Q8NCK7 471 aa8.28□□□□□ -1.08
SMC6-204ENST00000428868 OR52R1Q8NGF1 315 aa8.28□□□□□ -1.08
SMC6-204ENST00000428868 MIPOL1Q8TD10 442 aa8.28□□□□□ -1.08
SMC6-204ENST00000428868 PTPMT1Q8WUK0 201 aaPredicted RBP8.28□□□□□ -1.08
SMC6-204ENST00000428868 JADE3Q92613 823 aa8.28□□□□□ -1.08
SMC6-204ENST00000428868 CDS1Q92903 461 aa8.28□□□□□ -1.08
SMC6-204ENST00000428868 FAM162AQ96A26 154 aa8.28□□□□□ -1.08
SMC6-204ENST00000428868 TAMM41Q96BW9 452 aa8.28□□□□□ -1.08
SMC6-204ENST00000428868 SLC35A4Q96G79 324 aa8.28□□□□□ -1.08
SMC6-204ENST00000428868 TMEM19Q96HH6 336 aa8.28□□□□□ -1.08
SMC6-204ENST00000428868 RSRC1Q96IZ7 334 aaKnown RBP8.28□□□□□ -1.08
SMC6-204ENST00000428868 LRGUKQ96M69 825 aa8.28□□□□□ -1.08
SMC6-204ENST00000428868 NSMCE2Q96MF7 247 aa8.28□□□□□ -1.08
SMC6-204ENST00000428868 DGAT2Q96PD7 388 aa8.28□□□□□ -1.08
SMC6-204ENST00000428868 MS4A4EQ96PG1 132 aa8.28□□□□□ -1.08
SMC6-204ENST00000428868 SPSB2Q99619 263 aa8.28□□□□□ -1.08
SMC6-204ENST00000428868 CMKLR1Q99788 373 aa8.28□□□□□ -1.08
SMC6-204ENST00000428868 CNPPD1Q9BV87 410 aa8.28□□□□□ -1.08
SMC6-204ENST00000428868 ULBP3Q9BZM4 244 aa8.28□□□□□ -1.08
SMC6-204ENST00000428868 MUC13Q9H3R2 512 aa8.28□□□□□ -1.08
SMC6-204ENST00000428868 RNPEPL1Q9HAU8 725 aa8.28□□□□□ -1.08
SMC6-204ENST00000428868 MKKSQ9NPJ1 570 aaPredicted RBP8.28□□□□□ -1.08
SMC6-204ENST00000428868 PNO1Q9NRX1 252 aaKnown RBP8.28□□□□□ -1.08
SMC6-204ENST00000428868 DDX18Q9NVP1 670 aaKnown RBP8.28□□□□□ -1.08
SMC6-204ENST00000428868 FOXJ2Q9P0K8 574 aa8.28□□□□□ -1.08
SMC6-204ENST00000428868 PTGFRNQ9P2B2 879 aa8.28□□□□□ -1.08
SMC6-204ENST00000428868 MKL2Q9ULH7 1088 aa8.28□□□□□ -1.08
SMC6-204ENST00000428868 FAF1Q9UNN5 650 aaPredicted RBP8.28□□□□□ -1.08
SMC6-204ENST00000428868 C19orf53Q9UNZ5 99 aaPredicted RBP8.28□□□□□ -1.08
SMC6-204ENST00000428868 SATB2Q9UPW6 733 aa8.28□□□□□ -1.08
SMC6-204ENST00000428868 CORO2BQ9UQ03 480 aa8.28□□□□□ -1.08
SMC6-204ENST00000428868 ERVK-19Q9WJR5 959 aa8.28□□□□□ -1.08
SMC6-204ENST00000428868 AP3M1Q9Y2T2 418 aa8.28□□□□□ -1.08
SMC6-204ENST00000428868 MMACHCQ9Y4U1 282 aa8.28□□□□□ -1.08
SMC6-204ENST00000428868 GVINP1Q7Z2Y8 2422 aa8.28□□□□□ -1.08
SMC6-204ENST00000428868 CACNA1GO43497 2377 aa8.27□□□□□ -1.09
SMC6-204ENST00000428868 FREM2Q5SZK8 3169 aa8.27□□□□□ -1.09
SMC6-204ENST00000428868 CEP250Q9BV73 2442 aa8.27□□□□□ -1.09
SMC6-204ENST00000428868 A0A087WV62 115 aa8.27□□□□□ -1.09
SMC6-204ENST00000428868 CCDC187A0A096LP49 1063 aa8.27□□□□□ -1.09
SMC6-204ENST00000428868 DHRS12A0PJE2 317 aa8.27□□□□□ -1.09
SMC6-204ENST00000428868 GXYLT2A0PJZ3 443 aa8.27□□□□□ -1.09
SMC6-204ENST00000428868 BLACEA4D250 179 aa8.27□□□□□ -1.09
SMC6-204ENST00000428868 VSTM2BA6NLU5 285 aa8.27□□□□□ -1.09
SMC6-204ENST00000428868 AQP12BA6NM10 295 aa8.27□□□□□ -1.09
SMC6-204ENST00000428868 C17orf105B2RV13 164 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms