RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 ARL5AQ9Y689 179 aa4.87□□□□□ -1.63
RIF1-203ENST00000428287 A8MUA0 341 aa4.87□□□□□ -1.63
RIF1-203ENST00000428287 J3QRE1 110 aa4.87□□□□□ -1.63
RIF1-203ENST00000428287 UBL3O95164 117 aa4.87□□□□□ -1.63
RIF1-203ENST00000428287 LDOC1O95751 146 aaPredicted RBP4.87□□□□□ -1.63
RIF1-203ENST00000428287 IGHA1P01876 353 aa4.87□□□□□ -1.63
RIF1-203ENST00000428287 AHCYP23526 432 aa4.87□□□□□ -1.63
RIF1-203ENST00000428287 HAAOP46952 286 aa4.87□□□□□ -1.63
RIF1-203ENST00000428287 HNMTP50135 292 aa4.87□□□□□ -1.63
RIF1-203ENST00000428287 BDH1Q02338 343 aa4.87□□□□□ -1.63
RIF1-203ENST00000428287 GRIN2CQ14957 1233 aa4.87□□□□□ -1.63
RIF1-203ENST00000428287 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.87□□□□□ -1.63
RIF1-203ENST00000428287 FCRLBQ6BAA4 426 aa4.87□□□□□ -1.63
RIF1-203ENST00000428287 CAMKK1Q8N5S9 505 aa4.87□□□□□ -1.63
RIF1-203ENST00000428287 NEIL3Q8TAT5 605 aa4.87□□□□□ -1.63
RIF1-203ENST00000428287 IL4I1Q96RQ9 567 aa4.87□□□□□ -1.63
RIF1-203ENST00000428287 MROH8Q9H579 483 aa4.87□□□□□ -1.63
RIF1-203ENST00000428287 CTSFQ9UBX1 484 aa4.87□□□□□ -1.63
RIF1-203ENST00000428287 BACE2Q9Y5Z0 518 aa4.87□□□□□ -1.63
RIF1-203ENST00000428287 LOC730098B7Z3J9 87 aa4.87□□□□□ -1.63
RIF1-203ENST00000428287 GTPBP1O00178 669 aaKnown RBP4.87□□□□□ -1.63
RIF1-203ENST00000428287 TSPAN4O14817 238 aa4.87□□□□□ -1.63
RIF1-203ENST00000428287 RORAP35398 523 aa4.87□□□□□ -1.63
RIF1-203ENST00000428287 HMGCS2P54868 508 aa4.87□□□□□ -1.63
RIF1-203ENST00000428287 PYHIN1Q6K0P9 492 aa4.87□□□□□ -1.63
RIF1-203ENST00000428287 RGMBQ6NW40 437 aa4.87□□□□□ -1.63
RIF1-203ENST00000428287 C1orf94Q6P1W5 598 aa4.87□□□□□ -1.63
RIF1-203ENST00000428287 METTL3Q86U44 580 aaKnown RBP4.87□□□□□ -1.63
RIF1-203ENST00000428287 TMEM151BQ8IW70 566 aa4.87□□□□□ -1.63
RIF1-203ENST00000428287 SRFBP1Q8NEF9 429 aaKnown RBP4.87□□□□□ -1.63
RIF1-203ENST00000428287 NMUR1Q9HB89 426 aa4.87□□□□□ -1.63
RIF1-203ENST00000428287 SPTBN5Q9NRC6 3674 aaKnown RBP4.87□□□□□ -1.63
RIF1-203ENST00000428287 hCG_1807616A0A1W2PRN6 198 aa4.87□□□□□ -1.63
RIF1-203ENST00000428287 DNASE2O00115 360 aaPredicted RBP4.87□□□□□ -1.63
RIF1-203ENST00000428287 CTDSPLO15194 276 aa4.87□□□□□ -1.63
RIF1-203ENST00000428287 LANCL1O43813 399 aa4.87□□□□□ -1.63
RIF1-203ENST00000428287 RAMP2O60895 175 aa4.87□□□□□ -1.63
RIF1-203ENST00000428287 SERPINI2O75830 405 aa4.87□□□□□ -1.63
RIF1-203ENST00000428287 MTNR1AP48039 350 aa4.87□□□□□ -1.63
RIF1-203ENST00000428287 RABGGTBP53611 331 aa4.87□□□□□ -1.63
RIF1-203ENST00000428287 MAP3K7CLP57077 242 aa4.87□□□□□ -1.63
RIF1-203ENST00000428287 CDC42P60953 191 aa4.87□□□□□ -1.63
RIF1-203ENST00000428287 RPS7P62081 194 aaKnown RBP4.87□□□□□ -1.63
RIF1-203ENST00000428287 PDE7AQ13946 482 aa4.87□□□□□ -1.63
RIF1-203ENST00000428287 DNAJC5GQ8N7S2 189 aa4.87□□□□□ -1.63
RIF1-203ENST00000428287 VPS37AQ8NEZ2 397 aa4.87□□□□□ -1.63
RIF1-203ENST00000428287 SERPINB11Q96P15 392 aa4.87□□□□□ -1.63
RIF1-203ENST00000428287 SLC38A2Q96QD8 506 aa4.87□□□□□ -1.63
RIF1-203ENST00000428287 FAM126AQ9BYI3 521 aaPredicted RBP4.87□□□□□ -1.63
RIF1-203ENST00000428287 TLR8Q9NR97 1041 aaKnown RBP4.87□□□□□ -1.63
RIF1-203ENST00000428287 ZNF282Q9UDV7 671 aaPredicted RBP4.87□□□□□ -1.63
RIF1-203ENST00000428287 MGAT4BQ9UQ53 548 aa4.87□□□□□ -1.63
RIF1-203ENST00000428287 BTN3A3O00478 584 aa4.86□□□□□ -1.63
RIF1-203ENST00000428287 HYAL3O43820 417 aaPredicted RBP4.86□□□□□ -1.63
RIF1-203ENST00000428287 PRAF2O60831 178 aa4.86□□□□□ -1.63
RIF1-203ENST00000428287 TP53P04637 393 aaPredicted RBP4.86□□□□□ -1.63
RIF1-203ENST00000428287 TYRP14679 529 aa4.86□□□□□ -1.63
RIF1-203ENST00000428287 GSTM5P46439 218 aa4.86□□□□□ -1.63
RIF1-203ENST00000428287 DMC1Q14565 340 aa4.86□□□□□ -1.63
RIF1-203ENST00000428287 SLC5A12Q1EHB4 618 aa4.86□□□□□ -1.63
RIF1-203ENST00000428287 HFEQ30201 348 aa4.86□□□□□ -1.63
RIF1-203ENST00000428287 HECTD3Q5T447 861 aa4.86□□□□□ -1.63
RIF1-203ENST00000428287 SHFQ7M4L6 423 aa4.86□□□□□ -1.63
RIF1-203ENST00000428287 FBXO22Q8NEZ5 403 aa4.86□□□□□ -1.63
RIF1-203ENST00000428287 OR52N1Q8NH53 320 aa4.86□□□□□ -1.63
RIF1-203ENST00000428287 KLRG1Q96E93 195 aa4.86□□□□□ -1.63
RIF1-203ENST00000428287 OTUB1Q96FW1 271 aaPredicted RBP4.86□□□□□ -1.63
RIF1-203ENST00000428287 C12orf57Q99622 126 aa4.86□□□□□ -1.63
RIF1-203ENST00000428287 NPAS1Q99742 590 aa4.86□□□□□ -1.63
RIF1-203ENST00000428287 PIP5K1AQ99755 562 aa4.86□□□□□ -1.63
RIF1-203ENST00000428287 SEC22CQ9BRL7 303 aa4.86□□□□□ -1.63
RIF1-203ENST00000428287 NCKAP1Q9Y2A7 1128 aa4.86□□□□□ -1.63
RIF1-203ENST00000428287 PIEZO2Q9H5I5 2752 aa4.86□□□□□ -1.63
RIF1-203ENST00000428287 PRAMEF33A0A0G2JMD5 474 aa4.86□□□□□ -1.63
RIF1-203ENST00000428287 TMEM82A0PJX8 343 aa4.86□□□□□ -1.63
RIF1-203ENST00000428287 HPGDSO60760 199 aa4.86□□□□□ -1.63
RIF1-203ENST00000428287 PRAMEF10O60809 474 aa4.86□□□□□ -1.63
RIF1-203ENST00000428287 IFNA4P05014 189 aa4.86□□□□□ -1.63
RIF1-203ENST00000428287 ASGR2P07307 311 aa4.86□□□□□ -1.63
RIF1-203ENST00000428287 TXNP10599 105 aaKnown RBP4.86□□□□□ -1.63
RIF1-203ENST00000428287 PGFP49763 221 aa4.86□□□□□ -1.63
RIF1-203ENST00000428287 CEACAM20Q6UY09 585 aa4.86□□□□□ -1.63
RIF1-203ENST00000428287 AQP11Q8NBQ7 271 aa4.86□□□□□ -1.63
RIF1-203ENST00000428287 FAM71CQ8NEG0 241 aa4.86□□□□□ -1.63
RIF1-203ENST00000428287 SELENOMQ8WWX9 145 aa4.86□□□□□ -1.63
RIF1-203ENST00000428287 SCRN2Q96FV2 425 aa4.86□□□□□ -1.63
RIF1-203ENST00000428287 ZNF668Q96K58 619 aaPredicted RBP4.86□□□□□ -1.63
RIF1-203ENST00000428287 SPATA33Q96N06 139 aa4.86□□□□□ -1.63
RIF1-203ENST00000428287 ATF6BQ99941 703 aa4.86□□□□□ -1.63
RIF1-203ENST00000428287 MYOCQ99972 504 aa4.86□□□□□ -1.63
RIF1-203ENST00000428287 CIPCQ9C0C6 399 aa4.86□□□□□ -1.63
RIF1-203ENST00000428287 OPN4Q9UHM6 478 aa4.86□□□□□ -1.63
RIF1-203ENST00000428287 TEX13CA0A0J9YWL9 993 aa4.86□□□□□ -1.63
RIF1-203ENST00000428287 C2orf81A6NN90 581 aa4.86□□□□□ -1.63
RIF1-203ENST00000428287 WWP2O00308 870 aa4.86□□□□□ -1.63
RIF1-203ENST00000428287 HLA-DPB1P04440 258 aa4.86□□□□□ -1.63
RIF1-203ENST00000428287 AMD1P17707 334 aa4.86□□□□□ -1.63
RIF1-203ENST00000428287 ETV5P41161 510 aa4.86□□□□□ -1.63
RIF1-203ENST00000428287 RNF144AP50876 292 aaPredicted RBP4.86□□□□□ -1.63
RIF1-203ENST00000428287 RAB13P51153 203 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms