RNA–Protein interactions for RNA: ENST00000427926.5

CLTCL1-202, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-202ENST00000427926 NFATC4Q14934 902 aa9.47□□□□□ -0.89
CLTCL1-202ENST00000427926 UGT3A2Q3SY77 523 aa9.47□□□□□ -0.89
CLTCL1-202ENST00000427926 C6orf52Q5T4I8 152 aa9.47□□□□□ -0.89
CLTCL1-202ENST00000427926 EGFLAMQ63HQ2 1017 aa9.47□□□□□ -0.89
CLTCL1-202ENST00000427926 TMIEQ8NEW7 156 aa9.47□□□□□ -0.89
CLTCL1-202ENST00000427926 GRPEL2Q8TAA5 225 aa9.47□□□□□ -0.89
CLTCL1-202ENST00000427926 KAT8Q9H7Z6 458 aaKnown RBP9.47□□□□□ -0.89
CLTCL1-202ENST00000427926 MGAT4BQ9UQ53 548 aa9.47□□□□□ -0.89
CLTCL1-202ENST00000427926 ZSCAN5BA6NJL1 495 aa9.47□□□□□ -0.89
CLTCL1-202ENST00000427926 EDN1P05305 212 aa9.47□□□□□ -0.89
CLTCL1-202ENST00000427926 BPIP17213 487 aa9.47□□□□□ -0.89
CLTCL1-202ENST00000427926 ITIH1P19827 911 aa9.47□□□□□ -0.89
CLTCL1-202ENST00000427926 AKR1D1P51857 326 aa9.47□□□□□ -0.89
CLTCL1-202ENST00000427926 KCNC4Q03721 635 aa9.47□□□□□ -0.89
CLTCL1-202ENST00000427926 MPP2Q14168 576 aa9.47□□□□□ -0.89
CLTCL1-202ENST00000427926 HSF5Q4G112 596 aaPredicted RBP9.47□□□□□ -0.89
CLTCL1-202ENST00000427926 TXNRD3NBQ6F5E7 133 aa9.47□□□□□ -0.89
CLTCL1-202ENST00000427926 CARM1Q86X55 608 aa9.47□□□□□ -0.89
CLTCL1-202ENST00000427926 TTC9BQ8N6N2 239 aa9.47□□□□□ -0.89
CLTCL1-202ENST00000427926 BANPQ8N9N5 519 aa9.47□□□□□ -0.89
CLTCL1-202ENST00000427926 SLCO2A1Q92959 643 aa9.47□□□□□ -0.89
CLTCL1-202ENST00000427926 PEX13Q92968 403 aa9.47□□□□□ -0.89
CLTCL1-202ENST00000427926 TMEM203Q969S6 136 aa9.47□□□□□ -0.89
CLTCL1-202ENST00000427926 PELI2Q9HAT8 420 aa9.47□□□□□ -0.89
CLTCL1-202ENST00000427926 C12orf4Q9NQ89 552 aa9.47□□□□□ -0.89
CLTCL1-202ENST00000427926 TAAR2Q9P1P5 351 aa9.47□□□□□ -0.89
CLTCL1-202ENST00000427926 REV1Q9UBZ9 1251 aa9.47□□□□□ -0.89
CLTCL1-202ENST00000427926 KCNIP3Q9Y2W7 256 aa9.47□□□□□ -0.89
CLTCL1-202ENST00000427926 C13orf42A0A1B0GVH6 325 aa9.46□□□□□ -0.89
CLTCL1-202ENST00000427926 E7ENX8 843 aa9.46□□□□□ -0.89
CLTCL1-202ENST00000427926 PTHP01270 115 aa9.46□□□□□ -0.89
CLTCL1-202ENST00000427926 HLA-DPB1P04440 258 aa9.46□□□□□ -0.89
CLTCL1-202ENST00000427926 FAM205BPQ63HN1 556 aa9.46□□□□□ -0.89
CLTCL1-202ENST00000427926 HACD2Q6Y1H2 254 aa9.46□□□□□ -0.89
CLTCL1-202ENST00000427926 ZNF808Q8N4W9 903 aaPredicted RBP9.46□□□□□ -0.89
CLTCL1-202ENST00000427926 PAPD5Q8NDF8 572 aaKnown RBP9.46□□□□□ -0.89
CLTCL1-202ENST00000427926 OR11L1Q8NGX0 322 aa9.46□□□□□ -0.89
CLTCL1-202ENST00000427926 C7orf43Q8WVR3 580 aa9.46□□□□□ -0.89
CLTCL1-202ENST00000427926 ATP13A2Q9NQ11 1180 aa9.46□□□□□ -0.89
CLTCL1-202ENST00000427926 CCDC59Q9P031 241 aaKnown RBP9.46□□□□□ -0.89
CLTCL1-202ENST00000427926 STYXL1Q9Y6J8 313 aa9.46□□□□□ -0.89
CLTCL1-202ENST00000427926 ZNF850A8MQ14 1090 aa9.46□□□□□ -0.89
CLTCL1-202ENST00000427926 FOXE1O00358 373 aaPredicted RBP9.46□□□□□ -0.89
CLTCL1-202ENST00000427926 FBP2O00757 339 aa9.46□□□□□ -0.89
CLTCL1-202ENST00000427926 ORC5O43913 435 aa9.46□□□□□ -0.89
CLTCL1-202ENST00000427926 FCER2P06734 321 aa9.46□□□□□ -0.89
CLTCL1-202ENST00000427926 DNAJB1P25685 340 aa9.46□□□□□ -0.89
CLTCL1-202ENST00000427926 AGTR2P50052 363 aa9.46□□□□□ -0.89
CLTCL1-202ENST00000427926 MLLT10P55197 1068 aa9.46□□□□□ -0.89
CLTCL1-202ENST00000427926 CAV3P56539 151 aa9.46□□□□□ -0.89
CLTCL1-202ENST00000427926 TAS2R38P59533 333 aa9.46□□□□□ -0.89
CLTCL1-202ENST00000427926 DOC2AQ14183 400 aa9.46□□□□□ -0.89
CLTCL1-202ENST00000427926 TANGO2Q6ICL3 276 aa9.46□□□□□ -0.89
CLTCL1-202ENST00000427926 TMED4Q7Z7H5 227 aa9.46□□□□□ -0.89
CLTCL1-202ENST00000427926 S100A16Q96FQ6 103 aaKnown RBP9.46□□□□□ -0.89
CLTCL1-202ENST00000427926 OR6C1Q96RD1 312 aa9.46□□□□□ -0.89
CLTCL1-202ENST00000427926 SLC46A2Q9BY10 475 aa9.46□□□□□ -0.89
CLTCL1-202ENST00000427926 ZDHHC18Q9NUE0 388 aa9.46□□□□□ -0.89
CLTCL1-202ENST00000427926 H3BNC9 293 aa9.46□□□□□ -0.9
CLTCL1-202ENST00000427926 ZNF888P0CJ79 500 aaPredicted RBP9.46□□□□□ -0.9
CLTCL1-202ENST00000427926 GJA5P36382 358 aa9.46□□□□□ -0.9
CLTCL1-202ENST00000427926 FNTBP49356 437 aa9.46□□□□□ -0.9
CLTCL1-202ENST00000427926 NOVA1P51513 510 aaKnown RBP9.46□□□□□ -0.9
CLTCL1-202ENST00000427926 CDK3Q00526 305 aa9.46□□□□□ -0.9
CLTCL1-202ENST00000427926 KHDC1LQ5JSQ8 128 aa9.46□□□□□ -0.9
CLTCL1-202ENST00000427926 IL20RBQ6UXL0 311 aa9.46□□□□□ -0.9
CLTCL1-202ENST00000427926 USP43Q70EL4 1123 aa9.46□□□□□ -0.9
CLTCL1-202ENST00000427926 ZSWIM9Q86XI8 627 aa9.46□□□□□ -0.9
CLTCL1-202ENST00000427926 UBALD2Q8IYN6 164 aa9.46□□□□□ -0.9
CLTCL1-202ENST00000427926 TOMM5Q8N4H5 51 aa9.46□□□□□ -0.9
CLTCL1-202ENST00000427926 OR2T33Q8NG76 320 aa9.46□□□□□ -0.9
CLTCL1-202ENST00000427926 HTRA1Q92743 480 aa9.46□□□□□ -0.9
CLTCL1-202ENST00000427926 PYURFQ96I23 114 aa9.46□□□□□ -0.9
CLTCL1-202ENST00000427926 NANOGQ9H9S0 305 aa9.46□□□□□ -0.9
CLTCL1-202ENST00000427926 GSKIPQ9P0R6 139 aa9.46□□□□□ -0.9
CLTCL1-202ENST00000427926 DNMT3BQ9UBC3 853 aaKnown RBP9.46□□□□□ -0.9
CLTCL1-202ENST00000427926 AASSQ9UDR5 926 aa9.46□□□□□ -0.9
CLTCL1-202ENST00000427926 MRPS2Q9Y399 296 aaKnown RBP9.46□□□□□ -0.9
CLTCL1-202ENST00000427926 A0A087WUU8 490 aa9.46□□□□□ -0.9
CLTCL1-202ENST00000427926 TCRBV7S3A2A0A539 114 aa9.46□□□□□ -0.9
CLTCL1-202ENST00000427926 SAGE2PA6NJ88 616 aa9.46□□□□□ -0.9
CLTCL1-202ENST00000427926 MEIS3P2A8K0S8 358 aa9.46□□□□□ -0.9
CLTCL1-202ENST00000427926 FAM72CH0Y354 149 aa9.46□□□□□ -0.9
CLTCL1-202ENST00000427926 PTGESO14684 152 aa9.46□□□□□ -0.9
CLTCL1-202ENST00000427926 YY2O15391 372 aa9.46□□□□□ -0.9
CLTCL1-202ENST00000427926 B3GALNT1O75752 331 aa9.46□□□□□ -0.9
CLTCL1-202ENST00000427926 F8A1P23610 371 aa9.46□□□□□ -0.9
CLTCL1-202ENST00000427926 HMGCLP35914 325 aa9.46□□□□□ -0.9
CLTCL1-202ENST00000427926 NAA10P41227 235 aaPredicted RBP9.46□□□□□ -0.9
CLTCL1-202ENST00000427926 SLC6A8P48029 635 aa9.46□□□□□ -0.9
CLTCL1-202ENST00000427926 AP2S1P53680 142 aaPredicted RBP9.46□□□□□ -0.9
CLTCL1-202ENST00000427926 FXYD6P3P58550 94 aa9.46□□□□□ -0.9
CLTCL1-202ENST00000427926 GALNT1Q10472 559 aaPredicted RBP9.46□□□□□ -0.9
CLTCL1-202ENST00000427926 SMAD4Q13485 552 aaKnown RBP9.46□□□□□ -0.9
CLTCL1-202ENST00000427926 KCNJ11Q14654 390 aa9.46□□□□□ -0.9
CLTCL1-202ENST00000427926 FAM72AQ5TYM5 149 aa9.46□□□□□ -0.9
CLTCL1-202ENST00000427926 FAM72DQ6L9T8 149 aa9.46□□□□□ -0.9
CLTCL1-202ENST00000427926 ZDHHC24Q6UX98 284 aa9.46□□□□□ -0.9
CLTCL1-202ENST00000427926 RBMS3Q6XE24 437 aaKnown RBP9.46□□□□□ -0.9
CLTCL1-202ENST00000427926 WDR53Q7Z5U6 358 aaPredicted RBP9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms