RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 CALML5Q9NZT1 146 aa10.11□□□□□ -0.79
TCOF1-204ENST00000427724 FBXO9Q9UK97 447 aaPredicted RBP10.11□□□□□ -0.79
TCOF1-204ENST00000427724 PCTPQ9UKL6 214 aa10.11□□□□□ -0.79
TCOF1-204ENST00000427724 OR6C70A6NIJ9 312 aa10.1□□□□□ -0.79
TCOF1-204ENST00000427724 ARGFXA6NJG6 315 aa10.1□□□□□ -0.79
TCOF1-204ENST00000427724 ELOA3DA6NLF2 546 aaPredicted RBP10.1□□□□□ -0.79
TCOF1-204ENST00000427724 I6L893 689 aaPredicted RBP10.1□□□□□ -0.79
TCOF1-204ENST00000427724 BCAS1O75363 584 aaPredicted RBP10.1□□□□□ -0.79
TCOF1-204ENST00000427724 MT-CO3P00414 261 aa10.1□□□□□ -0.79
TCOF1-204ENST00000427724 FGF4P08620 206 aa10.1□□□□□ -0.79
TCOF1-204ENST00000427724 ITGA2P17301 1181 aa10.1□□□□□ -0.79
TCOF1-204ENST00000427724 COL9A1P20849 921 aa10.1□□□□□ -0.79
TCOF1-204ENST00000427724 CD247P20963 164 aa10.1□□□□□ -0.79
TCOF1-204ENST00000427724 ADRA1AP35348 466 aa10.1□□□□□ -0.79
TCOF1-204ENST00000427724 NUDT6P53370 316 aa10.1□□□□□ -0.79
TCOF1-204ENST00000427724 EPHA5P54756 1037 aa10.1□□□□□ -0.79
TCOF1-204ENST00000427724 TUBA3CQ13748 450 aa10.1□□□□□ -0.79
TCOF1-204ENST00000427724 RCAN2Q14206 197 aa10.1□□□□□ -0.79
TCOF1-204ENST00000427724 ELOA3BQ3SY89 546 aa10.1□□□□□ -0.79
TCOF1-204ENST00000427724 GTDC1Q4AE62 458 aa10.1□□□□□ -0.79
TCOF1-204ENST00000427724 GCNT6Q5T4J0 391 aa10.1□□□□□ -0.79
TCOF1-204ENST00000427724 FAM131AQ6UXB0 335 aa10.1□□□□□ -0.79
TCOF1-204ENST00000427724 GALNT7Q86SF2 657 aa10.1□□□□□ -0.79
TCOF1-204ENST00000427724 CARM1Q86X55 608 aa10.1□□□□□ -0.79
TCOF1-204ENST00000427724 NRROSQ86YC3 692 aa10.1□□□□□ -0.79
TCOF1-204ENST00000427724 PGBD5Q8N414 524 aa10.1□□□□□ -0.79
TCOF1-204ENST00000427724 ELOA3Q8NG57 546 aa10.1□□□□□ -0.79
TCOF1-204ENST00000427724 GTPBP3Q969Y2 492 aaKnown RBP10.1□□□□□ -0.79
TCOF1-204ENST00000427724 UBXN10Q96LJ8 280 aa10.1□□□□□ -0.79
TCOF1-204ENST00000427724 CUTCQ9NTM9 273 aa10.1□□□□□ -0.79
TCOF1-204ENST00000427724 COQ3Q9NZJ6 369 aa10.1□□□□□ -0.79
TCOF1-204ENST00000427724 CACNA1IQ9P0X4 2223 aa10.1□□□□□ -0.79
TCOF1-204ENST00000427724 IGHV1OR15-9A0A0B4J2B8 117 aa10.1□□□□□ -0.79
TCOF1-204ENST00000427724 ZNF726A6NNF4 738 aa10.1□□□□□ -0.79
TCOF1-204ENST00000427724 PLOD3O60568 738 aa10.1□□□□□ -0.79
TCOF1-204ENST00000427724 CD63P08962 238 aa10.1□□□□□ -0.79
TCOF1-204ENST00000427724 SBK3P0C264 359 aa10.1□□□□□ -0.79
TCOF1-204ENST00000427724 CHRNB1P11230 501 aa10.1□□□□□ -0.79
TCOF1-204ENST00000427724 ACPPP15309 386 aa10.1□□□□□ -0.79
TCOF1-204ENST00000427724 MYL12AP19105 171 aa10.1□□□□□ -0.79
TCOF1-204ENST00000427724 METAP1P53582 386 aa10.1□□□□□ -0.79
TCOF1-204ENST00000427724 NCS1P62166 190 aa10.1□□□□□ -0.79
TCOF1-204ENST00000427724 MXD1Q05195 221 aa10.1□□□□□ -0.79
TCOF1-204ENST00000427724 APOFQ13790 326 aa10.1□□□□□ -0.79
TCOF1-204ENST00000427724 ZNF730Q6ZMV8 503 aa10.1□□□□□ -0.79
TCOF1-204ENST00000427724 FAM129BQ96TA1 746 aa10.1□□□□□ -0.79
TCOF1-204ENST00000427724 ZNF717Q9BY31 904 aaPredicted RBP10.1□□□□□ -0.79
TCOF1-204ENST00000427724 SERGEFQ9UGK8 458 aa10.1□□□□□ -0.79
TCOF1-204ENST00000427724 TNFRSF10CO14798 259 aa10.1□□□□□ -0.79
TCOF1-204ENST00000427724 INMTO95050 263 aa10.1□□□□□ -0.79
TCOF1-204ENST00000427724 SNX4O95219 450 aa10.1□□□□□ -0.79
TCOF1-204ENST00000427724 PRLP01236 227 aa10.1□□□□□ -0.79
TCOF1-204ENST00000427724 MAP2K4P45985 399 aa10.1□□□□□ -0.79
TCOF1-204ENST00000427724 RNF144AP50876 292 aaPredicted RBP10.1□□□□□ -0.79
TCOF1-204ENST00000427724 GPLD1P80108 840 aa10.1□□□□□ -0.79
TCOF1-204ENST00000427724 TMEM52BQ4KMG9 183 aa10.1□□□□□ -0.79
TCOF1-204ENST00000427724 OR2T5Q6IEZ7 315 aa10.1□□□□□ -0.79
TCOF1-204ENST00000427724 LETMD1Q6P1Q0 360 aa10.1□□□□□ -0.79
TCOF1-204ENST00000427724 CD300LGQ6UXG3 332 aa10.1□□□□□ -0.79
TCOF1-204ENST00000427724 ZFAND4Q86XD8 727 aa10.1□□□□□ -0.79
TCOF1-204ENST00000427724 OR2T29Q8NH02 315 aa10.1□□□□□ -0.79
TCOF1-204ENST00000427724 ZNF486Q96H40 463 aaPredicted RBP10.1□□□□□ -0.79
TCOF1-204ENST00000427724 DHRS1Q96LJ7 313 aa10.1□□□□□ -0.79
TCOF1-204ENST00000427724 FER1L6-AS2Q96M78 137 aa10.1□□□□□ -0.79
TCOF1-204ENST00000427724 COL21A1Q96P44 957 aa10.1□□□□□ -0.79
TCOF1-204ENST00000427724 OR1F2PQ96R84 312 aa10.1□□□□□ -0.79
TCOF1-204ENST00000427724 MFRPQ9BY79 579 aa10.1□□□□□ -0.79
TCOF1-204ENST00000427724 LRRN3Q9H3W5 708 aa10.1□□□□□ -0.79
TCOF1-204ENST00000427724 PPP4R1LQ9P1A2 415 aa10.1□□□□□ -0.79
TCOF1-204ENST00000427724 MKRN2OSH3BPM6 223 aa10.1□□□□□ -0.79
TCOF1-204ENST00000427724 BRINP1O60477 761 aa10.1□□□□□ -0.79
TCOF1-204ENST00000427724 CHRM5P08912 532 aaPredicted RBP10.1□□□□□ -0.79
TCOF1-204ENST00000427724 PRPS1L1P21108 318 aa10.1□□□□□ -0.79
TCOF1-204ENST00000427724 MATN1P21941 496 aa10.1□□□□□ -0.79
TCOF1-204ENST00000427724 CCR7P32248 378 aa10.1□□□□□ -0.79
TCOF1-204ENST00000427724 KCNC3Q14003 757 aa10.1□□□□□ -0.79
TCOF1-204ENST00000427724 GPR19Q15760 415 aa10.1□□□□□ -0.79
TCOF1-204ENST00000427724 ZNF404Q494X3 552 aa10.1□□□□□ -0.79
TCOF1-204ENST00000427724 ERICH5Q6P6B1 374 aa10.1□□□□□ -0.79
TCOF1-204ENST00000427724 DEPDC4Q8N2C3 294 aa10.1□□□□□ -0.79
TCOF1-204ENST00000427724 CHCHD4Q8N4Q1 142 aa10.1□□□□□ -0.79
TCOF1-204ENST00000427724 ZNF548Q8NEK5 533 aaPredicted RBP10.1□□□□□ -0.79
TCOF1-204ENST00000427724 OR9A4Q8NGU2 314 aa10.1□□□□□ -0.79
TCOF1-204ENST00000427724 RSC1A1Q92681 617 aa10.1□□□□□ -0.79
TCOF1-204ENST00000427724 ALOXE3Q9BYJ1 711 aa10.1□□□□□ -0.79
TCOF1-204ENST00000427724 LYARQ9NX58 379 aaKnown RBP10.1□□□□□ -0.79
TCOF1-204ENST00000427724 TBC1D29Q9UFV1 150 aa10.1□□□□□ -0.79
TCOF1-204ENST00000427724 ENOPH1Q9UHY7 261 aa10.1□□□□□ -0.79
TCOF1-204ENST00000427724 PCDHGA10Q9Y5H3 936 aa10.1□□□□□ -0.79
TCOF1-204ENST00000427724 ATAD5Q96QE3 1844 aa10.1□□□□□ -0.79
TCOF1-204ENST00000427724 SHROOM3Q8TF72 1996 aa10.09□□□□□ -0.79
TCOF1-204ENST00000427724 FOCADQ5VW36 1801 aa10.09□□□□□ -0.79
TCOF1-204ENST00000427724 H0YAE9 185 aa10.09□□□□□ -0.79
TCOF1-204ENST00000427724 H0YC42 278 aa10.09□□□□□ -0.79
TCOF1-204ENST00000427724 PSIP1O75475 530 aaKnown RBP10.09□□□□□ -0.79
TCOF1-204ENST00000427724 EBLN1P0CF75 366 aa10.09□□□□□ -0.79
TCOF1-204ENST00000427724 LHCGRP22888 699 aa10.09□□□□□ -0.79
TCOF1-204ENST00000427724 SLC15A1P46059 708 aa10.09□□□□□ -0.79
TCOF1-204ENST00000427724 ALDH3B2P48448 385 aa10.09□□□□□ -0.79
TCOF1-204ENST00000427724 DCDP81605 110 aaKnown RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms