RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 PKIAP61925 76 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 KCNJ10P78508 379 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 DCDP81605 110 aaKnown RBP5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 TNFRSF17Q02223 184 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 CACNB2Q08289 660 aaPredicted RBP5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 ACSM1Q08AH1 577 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 PDZK1IP1Q13113 114 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 CTBP1Q13363 440 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 ILKQ13418 452 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 OR2F1Q13607 317 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 HEPACAMQ14CZ8 416 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 PPA1Q15181 289 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 NKPD1Q17RQ9 610 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 ZSWIM7Q19AV6 140 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 FAM174BQ3ZCQ3 159 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 CRTC2Q53ET0 693 aaPredicted RBP5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 USP39Q53GS9 565 aaKnown RBP5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 COL13A1Q5TAT6 717 aaPredicted RBP5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 HIST2H3PS2Q5TEC6 136 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 DCAF15Q66K64 600 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 VASNQ6EMK4 673 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 NADSYN1Q6IA69 706 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 ALKBH2Q6NS38 261 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 MSANTD2Q6P1R3 559 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 MPZL3Q6UWV2 235 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 TMUB2Q71RG4 321 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 ARMCX2Q7L311 632 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 HIST3H2AQ7L7L0 130 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 REC114Q7Z4M0 266 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 ABI3BPQ7Z7G0 1075 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 TMEM179BQ7Z7N9 219 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 PDZD3Q86UT5 571 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 TAC4Q86UU9 113 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 TMEM200AQ86VY9 491 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 PAQR7Q86WK9 346 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 DCUN1D3Q8IWE4 304 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 LGI4Q8N135 537 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 SLC44A3Q8N4M1 653 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 CERS5Q8N5B7 392 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 ZBTB2Q8N680 514 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 DCBLD1Q8N8Z6 715 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 POMGNT2Q8NAT1 580 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 DBF4BQ8NFT6 615 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 OR1S1Q8NH92 325 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 OR14A16Q8NHC5 309 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 AKR7LQ8NHP1 331 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 WDR20Q8TBZ3 569 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 GRAPLQ8TC17 118 aaPredicted RBP5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 PIGBQ92521 554 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 HIST1H2ACQ93077 130 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 TRIM43Q96BQ3 446 aaPredicted RBP5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 CELF6Q96J87 481 aaKnown RBP5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 HSH2DQ96JZ2 352 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 C12orf66Q96MD2 445 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 KCNC2Q96PR1 638 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 GAS2L1Q99501 681 aaPredicted RBP5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 ZNF559Q9BR84 538 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 C2orf88Q9BSF0 95 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 C11orf84Q9BUA3 381 aaPredicted RBP5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 KATNB1Q9BVA0 655 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 SEMA4CQ9C0C4 833 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 TOLLIPQ9H0E2 274 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 OR51V1Q9H2C8 321 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 TNKS2Q9H2K2 1166 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 OSGEPL1Q9H4B0 414 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 ESRP2Q9H6T0 727 aaKnown RBP5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 BCAS3Q9H6U6 928 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 ARNT2Q9HBZ2 717 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 SARS2Q9NP81 518 aaKnown RBP5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 SLC6A20Q9NP91 592 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 RAD18Q9NS91 495 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 C14orf105Q9NVL8 296 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 PRMT7Q9NVM4 692 aaPredicted RBP5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 FAM120CQ9NX05 1096 aaKnown RBP5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 WWOXQ9NZC7 414 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 VAPAQ9P0L0 249 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 MGAT4CQ9UBM8 478 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 ZNF629Q9UEG4 869 aaPredicted RBP5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 NDOR1Q9UHB4 597 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 FBXL2Q9UKC9 423 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 PCTPQ9UKL6 214 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 SLC6A14Q9UN76 642 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 ERVK-19Q9WJR5 959 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 DLGAP4Q9Y2H0 992 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 PCDHGA9Q9Y5G4 932 aaKnown RBP5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 PCDHGA2Q9Y5H1 932 aa5.33□□□□□ -1.56
VTI1BP4-201ENST00000427516 STRCP1A6NGW2 1772 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 A0A0G2JMZ2 1700 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 LRRC37A2A6NM11 1700 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 LRRC37AA6NMS7 1700 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 TRBV5-3A0A0A0MS03 114 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 RFPL4AA6NLU0 287 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 RFPL4AL1F8VTS6 287 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 NPIPB9F8W1W9 429 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 RFXAPO00287 272 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 PGRMC2O15173 223 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 ZNF749O43361 778 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 OIP5O43482 229 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 TGOLN2O43493 480 aa5.32□□□□□ -1.56
VTI1BP4-201ENST00000427516 CDC123O75794 336 aaPredicted RBP5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms