RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 UBBP0CG47 229 aa13.8□□□□□ -0.2
PTPN13-203ENST00000427191 UBCP0CG48 685 aaKnown RBP13.8□□□□□ -0.2
PTPN13-203ENST00000427191 RPS27AP62979 156 aaKnown RBP13.8□□□□□ -0.2
PTPN13-203ENST00000427191 UBA52P62987 128 aaKnown RBP13.8□□□□□ -0.2
PTPN13-203ENST00000427191 LIX1LQ8IVB5 337 aa13.8□□□□□ -0.2
PTPN13-203ENST00000427191 NETO2Q8NC67 525 aa13.8□□□□□ -0.2
PTPN13-203ENST00000427191 SLC25A44Q96H78 314 aaPredicted RBP13.8□□□□□ -0.2
PTPN13-203ENST00000427191 RANBP9Q96S59 729 aa13.8□□□□□ -0.2
PTPN13-203ENST00000427191 ACTRT3Q9BYD9 372 aa13.8□□□□□ -0.2
PTPN13-203ENST00000427191 SIX3O95343 332 aaPredicted RBP13.8□□□□□ -0.2
PTPN13-203ENST00000427191 GSRP00390 522 aa13.8□□□□□ -0.2
PTPN13-203ENST00000427191 GALTP07902 379 aa13.8□□□□□ -0.2
PTPN13-203ENST00000427191 AKR1C4P17516 323 aa13.8□□□□□ -0.2
PTPN13-203ENST00000427191 METTL2BQ6P1Q9 378 aaKnown RBP13.8□□□□□ -0.2
PTPN13-203ENST00000427191 ASPGQ86U10 573 aa13.8□□□□□ -0.2
PTPN13-203ENST00000427191 DPEP3Q9H4B8 488 aa13.8□□□□□ -0.2
PTPN13-203ENST00000427191 LUZP4Q9P127 313 aa13.8□□□□□ -0.2
PTPN13-203ENST00000427191 LOXHD1Q8IVV2 1947 aa13.8□□□□□ -0.2
PTPN13-203ENST00000427191 OR51F1A6NGY5 319 aa13.8□□□□□ -0.2
PTPN13-203ENST00000427191 UBL4AP11441 157 aa13.8□□□□□ -0.2
PTPN13-203ENST00000427191 RNH1P13489 461 aaKnown RBP13.8□□□□□ -0.2
PTPN13-203ENST00000427191 CD79BP40259 229 aa13.8□□□□□ -0.2
PTPN13-203ENST00000427191 HNRNPFP52597 415 aaKnown RBP13.8□□□□□ -0.2
PTPN13-203ENST00000427191 NIPAL4Q0D2K0 466 aa13.8□□□□□ -0.2
PTPN13-203ENST00000427191 XKR5Q6UX68 686 aa13.8□□□□□ -0.2
PTPN13-203ENST00000427191 ZNF695Q8IW36 515 aa13.8□□□□□ -0.2
PTPN13-203ENST00000427191 DPCDQ9BVM2 203 aaPredicted RBP13.8□□□□□ -0.2
PTPN13-203ENST00000427191 PPP1R14DQ9NXH3 145 aa13.8□□□□□ -0.2
PTPN13-203ENST00000427191 MEN1O00255 615 aa13.8□□□□□ -0.2
PTPN13-203ENST00000427191 RFPL3O75679 317 aa13.8□□□□□ -0.2
PTPN13-203ENST00000427191 TAS2R30P59541 319 aa13.8□□□□□ -0.2
PTPN13-203ENST00000427191 PAPD5Q8NDF8 572 aaKnown RBP13.8□□□□□ -0.2
PTPN13-203ENST00000427191 TXNDC15Q96J42 360 aa13.8□□□□□ -0.2
PTPN13-203ENST00000427191 INPP5EQ9NRR6 644 aa13.8□□□□□ -0.2
PTPN13-203ENST00000427191 DMAC2Q9NW81 257 aa13.8□□□□□ -0.2
PTPN13-203ENST00000427191 KHNYNO15037 678 aaKnown RBP13.8□□□□□ -0.2
PTPN13-203ENST00000427191 LSSP48449 732 aa13.8□□□□□ -0.2
PTPN13-203ENST00000427191 KCNAB2Q13303 367 aa13.8□□□□□ -0.2
PTPN13-203ENST00000427191 OR13J1Q8NGT2 312 aa13.8□□□□□ -0.2
PTPN13-203ENST00000427191 SARDHQ9UL12 918 aa13.8□□□□□ -0.2
PTPN13-203ENST00000427191 NDRG2Q9UN36 371 aaKnown RBP13.8□□□□□ -0.2
PTPN13-203ENST00000427191 A6NIZ1 184 aa13.8□□□□□ -0.2
PTPN13-203ENST00000427191 PIP5K1CO60331 668 aa13.8□□□□□ -0.2
PTPN13-203ENST00000427191 CFIP05156 583 aa13.8□□□□□ -0.2
PTPN13-203ENST00000427191 PRSS3P35030 304 aa13.8□□□□□ -0.2
PTPN13-203ENST00000427191 RAP1BP61224 184 aa13.8□□□□□ -0.2
PTPN13-203ENST00000427191 RAP1AP62834 184 aa13.8□□□□□ -0.2
PTPN13-203ENST00000427191 SLAMF1Q13291 335 aa13.8□□□□□ -0.2
PTPN13-203ENST00000427191 C22orf39Q6P5X5 142 aa13.8□□□□□ -0.2
PTPN13-203ENST00000427191 DEDD2Q8WXF8 326 aa13.8□□□□□ -0.2
PTPN13-203ENST00000427191 CIDECQ96AQ7 238 aaPredicted RBP13.8□□□□□ -0.2
PTPN13-203ENST00000427191 GOSR2O14653 212 aa13.8□□□□□ -0.2
PTPN13-203ENST00000427191 C1orf94Q6P1W5 598 aa13.8□□□□□ -0.2
PTPN13-203ENST00000427191 NUP43Q8NFH3 380 aa13.8□□□□□ -0.2
PTPN13-203ENST00000427191 ZNF417Q8TAU3 575 aa13.8□□□□□ -0.2
PTPN13-203ENST00000427191 PPIL3Q9H2H8 161 aaKnown RBP13.8□□□□□ -0.2
PTPN13-203ENST00000427191 GPR25O00155 361 aa13.79□□□□□ -0.2
PTPN13-203ENST00000427191 TSPAN6O43657 245 aa13.79□□□□□ -0.2
PTPN13-203ENST00000427191 AMY2AP04746 511 aa13.79□□□□□ -0.2
PTPN13-203ENST00000427191 FBXL22Q6P050 247 aa13.79□□□□□ -0.2
PTPN13-203ENST00000427191 RNF111Q6ZNA4 994 aa13.79□□□□□ -0.2
PTPN13-203ENST00000427191 SUMF2Q8NBJ7 301 aa13.79□□□□□ -0.2
PTPN13-203ENST00000427191 TBC1D20Q96BZ9 403 aa13.79□□□□□ -0.2
PTPN13-203ENST00000427191 MUS81Q96NY9 551 aa13.79□□□□□ -0.2
PTPN13-203ENST00000427191 FZD8Q9H461 694 aa13.79□□□□□ -0.2
PTPN13-203ENST00000427191 FBRSQ9HAH7 460 aa13.79□□□□□ -0.2
PTPN13-203ENST00000427191 GALPQ9UBC7 116 aa13.79□□□□□ -0.2
PTPN13-203ENST00000427191 NKX1-2Q9UD57 310 aaPredicted RBP13.79□□□□□ -0.2
PTPN13-203ENST00000427191 TUBG2Q9NRH3 451 aa13.79□□□□□ -0.2
PTPN13-203ENST00000427191 SLC6A14Q9UN76 642 aa13.79□□□□□ -0.2
PTPN13-203ENST00000427191 PRAMEF2O60811 474 aa13.79□□□□□ -0.2
PTPN13-203ENST00000427191 AHSGP02765 367 aa13.79□□□□□ -0.2
PTPN13-203ENST00000427191 BPIP17213 487 aa13.79□□□□□ -0.2
PTPN13-203ENST00000427191 CHRNB4P30926 498 aa13.79□□□□□ -0.2
PTPN13-203ENST00000427191 PLCXD2Q0VAA5 305 aa13.79□□□□□ -0.2
PTPN13-203ENST00000427191 SF3A2Q15428 464 aaKnown RBP13.79□□□□□ -0.2
PTPN13-203ENST00000427191 OR6T1Q8NGN1 323 aa13.79□□□□□ -0.2
PTPN13-203ENST00000427191 OR5AK2Q8NH90 309 aa13.79□□□□□ -0.2
PTPN13-203ENST00000427191 ZNF461Q8TAF7 563 aa13.79□□□□□ -0.2
PTPN13-203ENST00000427191 CD99L2Q8TCZ2 262 aa13.79□□□□□ -0.2
PTPN13-203ENST00000427191 HIPK2Q9H2X6 1198 aa13.79□□□□□ -0.2
PTPN13-203ENST00000427191 FAM118AQ9NWS6 357 aa13.79□□□□□ -0.2
PTPN13-203ENST00000427191 GGT3PA6NGU5 568 aa13.79□□□□□ -0.2
PTPN13-203ENST00000427191 PEX14O75381 377 aa13.79□□□□□ -0.2
PTPN13-203ENST00000427191 OR4Q2P0C623 313 aa13.79□□□□□ -0.2
PTPN13-203ENST00000427191 PNMTP11086 282 aa13.79□□□□□ -0.2
PTPN13-203ENST00000427191 NFATC2Q13469 925 aa13.79□□□□□ -0.2
PTPN13-203ENST00000427191 HORMAD2Q8N7B1 307 aa13.79□□□□□ -0.2
PTPN13-203ENST00000427191 FNDC9Q8TBE3 224 aa13.79□□□□□ -0.2
PTPN13-203ENST00000427191 TLR9Q9NR96 1032 aa13.79□□□□□ -0.2
PTPN13-203ENST00000427191 RNF11Q9Y3C5 154 aa13.79□□□□□ -0.2
PTPN13-203ENST00000427191 PLEKHM1Q9Y4G2 1056 aa13.79□□□□□ -0.2
PTPN13-203ENST00000427191 MPPED1O15442 326 aa13.79□□□□□ -0.2
PTPN13-203ENST00000427191 B4GALT2O60909 372 aa13.79□□□□□ -0.2
PTPN13-203ENST00000427191 PRKCGP05129 697 aa13.79□□□□□ -0.2
PTPN13-203ENST00000427191 ELK4P28324 431 aa13.79□□□□□ -0.2
PTPN13-203ENST00000427191 SLC10A6Q3KNW5 377 aa13.79□□□□□ -0.2
PTPN13-203ENST00000427191 DPY19L2P1Q6NXN4 242 aa13.79□□□□□ -0.2
PTPN13-203ENST00000427191 GPR137CQ8N3F9 429 aa13.79□□□□□ -0.2
PTPN13-203ENST00000427191 ZDHHC1Q8WTX9 485 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms