RNA–Protein interactions for RNA: ENST00000426542.6

ARHGEF28-203, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARHGEF28, Length 6,118 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-203ENST00000426542 IRF2P14316 349 aa17.11■□□□□ 0.33
ARHGEF28-203ENST00000426542 HOXB9P17482 250 aaPredicted RBP17.11■□□□□ 0.33
ARHGEF28-203ENST00000426542 SIM1P81133 766 aaPredicted RBP17.11■□□□□ 0.33
ARHGEF28-203ENST00000426542 TSPAN33Q86UF1 283 aa17.11■□□□□ 0.33
ARHGEF28-203ENST00000426542 C16orf78Q8WTQ4 265 aa17.11■□□□□ 0.33
ARHGEF28-203ENST00000426542 COPZ2Q9P299 210 aa17.11■□□□□ 0.33
ARHGEF28-203ENST00000426542 BRINP1O60477 761 aa17.1■□□□□ 0.33
ARHGEF28-203ENST00000426542 TFPTP0C1Z6 253 aa17.1■□□□□ 0.33
ARHGEF28-203ENST00000426542 OTX2P32243 289 aa17.1■□□□□ 0.33
ARHGEF28-203ENST00000426542 NIPAL4Q0D2K0 466 aa17.1■□□□□ 0.33
ARHGEF28-203ENST00000426542 ZC3H14Q6PJT7 736 aaKnown RBP17.1■□□□□ 0.33
ARHGEF28-203ENST00000426542 FAM46BQ96A09 425 aa17.1■□□□□ 0.33
ARHGEF28-203ENST00000426542 KLHL15Q96M94 604 aa17.1■□□□□ 0.33
ARHGEF28-203ENST00000426542 TP63Q9H3D4 680 aaPredicted RBP17.1■□□□□ 0.33
ARHGEF28-203ENST00000426542 ADRB3P13945 408 aa17.1■□□□□ 0.33
ARHGEF28-203ENST00000426542 LSSP48449 732 aa17.1■□□□□ 0.33
ARHGEF28-203ENST00000426542 FAM205BPQ63HN1 556 aa17.1■□□□□ 0.33
ARHGEF28-203ENST00000426542 DDIT4LQ96D03 193 aa17.1■□□□□ 0.33
ARHGEF28-203ENST00000426542 IL23AQ9NPF7 189 aa17.1■□□□□ 0.33
ARHGEF28-203ENST00000426542 GPRC5BQ9NZH0 403 aa17.1■□□□□ 0.33
ARHGEF28-203ENST00000426542 RARRES3Q9UL19 164 aa17.1■□□□□ 0.33
ARHGEF28-203ENST00000426542 CICQ96RK0 1608 aaPredicted RBP17.1■□□□□ 0.33
ARHGEF28-203ENST00000426542 GGT3PA6NGU5 568 aa17.1■□□□□ 0.33
ARHGEF28-203ENST00000426542 LATO43561 262 aa17.1■□□□□ 0.33
ARHGEF28-203ENST00000426542 CTC1Q2NKJ3 1217 aa17.1■□□□□ 0.33
ARHGEF28-203ENST00000426542 COL28A1Q2UY09 1125 aa17.1■□□□□ 0.33
ARHGEF28-203ENST00000426542 FIGLAQ6QHK4 219 aa17.1■□□□□ 0.33
ARHGEF28-203ENST00000426542 ZNF296Q8WUU4 475 aaPredicted RBP17.1■□□□□ 0.33
ARHGEF28-203ENST00000426542 SPRYD4Q8WW59 207 aaPredicted RBP17.1■□□□□ 0.33
ARHGEF28-203ENST00000426542 DIO2Q92813 273 aa17.1■□□□□ 0.33
ARHGEF28-203ENST00000426542 MGLLQ99685 303 aa17.1■□□□□ 0.33
ARHGEF28-203ENST00000426542 RNF186Q9NXI6 227 aa17.1■□□□□ 0.33
ARHGEF28-203ENST00000426542 P04436 131 aa17.1■□□□□ 0.33
ARHGEF28-203ENST00000426542 CD70P32970 193 aa17.1■□□□□ 0.33
ARHGEF28-203ENST00000426542 SPINT3P49223 89 aa17.1■□□□□ 0.33
ARHGEF28-203ENST00000426542 ARSDP51689 593 aa17.1■□□□□ 0.33
ARHGEF28-203ENST00000426542 CLDN8P56748 225 aa17.1■□□□□ 0.33
ARHGEF28-203ENST00000426542 RUNX3Q13761 415 aa17.1■□□□□ 0.33
ARHGEF28-203ENST00000426542 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.1■□□□□ 0.33
ARHGEF28-203ENST00000426542 RTP2Q5QGT7 225 aa17.1■□□□□ 0.33
ARHGEF28-203ENST00000426542 ARHGAP12Q8IWW6 846 aa17.1■□□□□ 0.33
ARHGEF28-203ENST00000426542 KLHDC8AQ8IYD2 350 aa17.1■□□□□ 0.33
ARHGEF28-203ENST00000426542 MAN2B1O00754 1011 aa17.1■□□□□ 0.33
ARHGEF28-203ENST00000426542 FBP2O00757 339 aa17.1■□□□□ 0.33
ARHGEF28-203ENST00000426542 SDC3O75056 442 aa17.1■□□□□ 0.33
ARHGEF28-203ENST00000426542 VIPR2P41587 438 aa17.1■□□□□ 0.33
ARHGEF28-203ENST00000426542 HHEXQ03014 270 aa17.1■□□□□ 0.33
ARHGEF28-203ENST00000426542 SPHARQ15513 63 aa17.1■□□□□ 0.33
ARHGEF28-203ENST00000426542 CDHR3Q6ZTQ4 885 aa17.1■□□□□ 0.33
ARHGEF28-203ENST00000426542 MINDY1Q8N5J2 469 aa17.1■□□□□ 0.33
ARHGEF28-203ENST00000426542 EIF5A2Q9GZV4 153 aaKnown RBP17.1■□□□□ 0.33
ARHGEF28-203ENST00000426542 KCNK13Q9HB14 408 aa17.1■□□□□ 0.33
ARHGEF28-203ENST00000426542 MAN2C1Q9NTJ4 1040 aa17.1■□□□□ 0.33
ARHGEF28-203ENST00000426542 PRSS56P0CW18 603 aa17.09■□□□□ 0.33
ARHGEF28-203ENST00000426542 C5AR1P21730 350 aa17.09■□□□□ 0.33
ARHGEF28-203ENST00000426542 GMPRP36959 345 aa17.09■□□□□ 0.33
ARHGEF28-203ENST00000426542 RCAN2Q14206 197 aa17.09■□□□□ 0.33
ARHGEF28-203ENST00000426542 MTFR2Q6P444 385 aa17.09■□□□□ 0.33
ARHGEF28-203ENST00000426542 LRRC15Q8TF66 581 aa17.09■□□□□ 0.33
ARHGEF28-203ENST00000426542 SLC39A1Q9NY26 324 aa17.09■□□□□ 0.33
ARHGEF28-203ENST00000426542 DIRAS3O95661 229 aa17.09■□□□□ 0.33
ARHGEF28-203ENST00000426542 AKR1C4P17516 323 aa17.09■□□□□ 0.33
ARHGEF28-203ENST00000426542 IL1RNP18510 177 aa17.09■□□□□ 0.33
ARHGEF28-203ENST00000426542 MAGEA3P43357 314 aa17.09■□□□□ 0.33
ARHGEF28-203ENST00000426542 RPS15P62841 145 aaKnown RBP17.09■□□□□ 0.33
ARHGEF28-203ENST00000426542 NSDHLQ15738 373 aa17.09■□□□□ 0.33
ARHGEF28-203ENST00000426542 ZNF761Q86XN6 746 aaPredicted RBP17.09■□□□□ 0.33
ARHGEF28-203ENST00000426542 OR4K13Q8NH42 304 aa17.09■□□□□ 0.33
ARHGEF28-203ENST00000426542 HDHD5Q9BXW7 423 aa17.09■□□□□ 0.33
ARHGEF28-203ENST00000426542 RANBP3Q9H6Z4 567 aaPredicted RBP17.09■□□□□ 0.33
ARHGEF28-203ENST00000426542 IFT172Q9UG01 1749 aa17.09■□□□□ 0.33
ARHGEF28-203ENST00000426542 B8ZZF3 427 aa17.09■□□□□ 0.33
ARHGEF28-203ENST00000426542 UCHL1P09936 223 aa17.09■□□□□ 0.33
ARHGEF28-203ENST00000426542 ECHDC3Q96DC8 303 aa17.09■□□□□ 0.33
ARHGEF28-203ENST00000426542 BOCQ9BWV1 1114 aa17.09■□□□□ 0.33
ARHGEF28-203ENST00000426542 CARD8Q9Y2G2 431 aa17.09■□□□□ 0.33
ARHGEF28-203ENST00000426542 SOBPA7XYQ1 873 aa17.09■□□□□ 0.33
ARHGEF28-203ENST00000426542 RAB11BQ15907 218 aa17.09■□□□□ 0.33
ARHGEF28-203ENST00000426542 SLC18B1Q6NT16 456 aa17.09■□□□□ 0.33
ARHGEF28-203ENST00000426542 ELMOD2Q8IZ81 293 aa17.09■□□□□ 0.33
ARHGEF28-203ENST00000426542 NLGN4YQ8NFZ3 816 aaPredicted RBP17.09■□□□□ 0.33
ARHGEF28-203ENST00000426542 C16orf58Q96GQ5 468 aa17.09■□□□□ 0.33
ARHGEF28-203ENST00000426542 TMEM19Q96HH6 336 aa17.09■□□□□ 0.33
ARHGEF28-203ENST00000426542 RADILQ96JH8 1075 aa17.09■□□□□ 0.33
ARHGEF28-203ENST00000426542 TOXO94900 526 aa17.09■□□□□ 0.33
ARHGEF28-203ENST00000426542 NTSR1P30989 418 aa17.09■□□□□ 0.33
ARHGEF28-203ENST00000426542 ZXDBP98169 803 aa17.09■□□□□ 0.33
ARHGEF28-203ENST00000426542 RSU1Q15404 277 aa17.09■□□□□ 0.33
ARHGEF28-203ENST00000426542 UBE2UQ5VVX9 321 aa17.09■□□□□ 0.33
ARHGEF28-203ENST00000426542 FAM180BQ6P0A1 224 aa17.09■□□□□ 0.33
ARHGEF28-203ENST00000426542 ZNF649Q9BS31 505 aa17.09■□□□□ 0.33
ARHGEF28-203ENST00000426542 DNTTIP1Q9H147 329 aa17.09■□□□□ 0.33
ARHGEF28-203ENST00000426542 TGM5O43548 720 aa17.08■□□□□ 0.33
ARHGEF28-203ENST00000426542 LATS1O95835 1130 aa17.08■□□□□ 0.33
ARHGEF28-203ENST00000426542 MANEALQ5VSG8 457 aa17.08■□□□□ 0.33
ARHGEF28-203ENST00000426542 PLBD1Q6P4A8 553 aa17.08■□□□□ 0.33
ARHGEF28-203ENST00000426542 PLXDC1Q8IUK5 500 aa17.08■□□□□ 0.33
ARHGEF28-203ENST00000426542 FTMTQ8N4E7 242 aa17.08■□□□□ 0.33
ARHGEF28-203ENST00000426542 TPSD1Q9BZJ3 242 aa17.08■□□□□ 0.33
ARHGEF28-203ENST00000426542 RGCCQ9H4X1 137 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms