RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 S100A5P33763 92 aa10.08□□□□□ -0.8
CUX1-205ENST00000425244 SSR2P43308 183 aa10.08□□□□□ -0.8
CUX1-205ENST00000425244 SYPL1Q16563 259 aa10.08□□□□□ -0.8
CUX1-205ENST00000425244 TCTN3Q6NUS6 607 aa10.08□□□□□ -0.8
CUX1-205ENST00000425244 BCDIN3DQ7Z5W3 292 aaKnown RBP10.08□□□□□ -0.8
CUX1-205ENST00000425244 SLC30A8Q8IWU4 369 aa10.08□□□□□ -0.8
CUX1-205ENST00000425244 CADM3Q8N126 398 aa10.08□□□□□ -0.8
CUX1-205ENST00000425244 ZBED6CLQ96FA7 236 aaPredicted RBP10.08□□□□□ -0.8
CUX1-205ENST00000425244 C12orf66Q96MD2 445 aa10.08□□□□□ -0.8
CUX1-205ENST00000425244 MGLLQ99685 303 aa10.08□□□□□ -0.8
CUX1-205ENST00000425244 SLC7A5P2Q9GIP4 190 aa10.08□□□□□ -0.8
CUX1-205ENST00000425244 RHBGQ9H310 441 aa10.08□□□□□ -0.8
CUX1-205ENST00000425244 NEUROD4Q9HD90 331 aa10.08□□□□□ -0.8
CUX1-205ENST00000425244 POLMQ9NP87 494 aaPredicted RBP10.08□□□□□ -0.8
CUX1-205ENST00000425244 A4GALTQ9NPC4 353 aa10.08□□□□□ -0.8
CUX1-205ENST00000425244 LHX9Q9NQ69 397 aa10.08□□□□□ -0.8
CUX1-205ENST00000425244 BDP1A6H8Y1 2624 aa10.08□□□□□ -0.8
CUX1-205ENST00000425244 AGAP5A6NIR3 686 aa10.08□□□□□ -0.8
CUX1-205ENST00000425244 M0R3H8 397 aa10.08□□□□□ -0.8
CUX1-205ENST00000425244 LCMT2O60294 686 aaKnown RBP10.08□□□□□ -0.8
CUX1-205ENST00000425244 SEMA3DO95025 777 aa10.08□□□□□ -0.8
CUX1-205ENST00000425244 H1F0P07305 194 aaKnown RBP10.08□□□□□ -0.8
CUX1-205ENST00000425244 DCNP07585 359 aaKnown RBP10.08□□□□□ -0.8
CUX1-205ENST00000425244 NR2F1P10589 423 aa10.08□□□□□ -0.8
CUX1-205ENST00000425244 ALOX12P18054 663 aa10.08□□□□□ -0.8
CUX1-205ENST00000425244 GTF2E2P29084 291 aaKnown RBP10.08□□□□□ -0.8
CUX1-205ENST00000425244 UGT2B10P36537 528 aa10.08□□□□□ -0.8
CUX1-205ENST00000425244 TMED10P49755 219 aaKnown RBP10.08□□□□□ -0.8
CUX1-205ENST00000425244 OLR1P78380 273 aa10.08□□□□□ -0.8
CUX1-205ENST00000425244 RPA4Q13156 261 aa10.08□□□□□ -0.8
CUX1-205ENST00000425244 PIN1Q13526 163 aaPredicted RBP10.08□□□□□ -0.8
CUX1-205ENST00000425244 CARTPTQ16568 116 aa10.08□□□□□ -0.8
CUX1-205ENST00000425244 ZNF770Q6IQ21 691 aaPredicted RBP10.08□□□□□ -0.8
CUX1-205ENST00000425244 ZNF367Q7RTV3 350 aa10.08□□□□□ -0.8
CUX1-205ENST00000425244 C11orf74Q86VG3 221 aa10.08□□□□□ -0.8
CUX1-205ENST00000425244 LACC1Q8IV20 430 aa10.08□□□□□ -0.8
CUX1-205ENST00000425244 IQCF1Q8N6M8 205 aa10.08□□□□□ -0.8
CUX1-205ENST00000425244 FAM46DQ8NEK8 389 aa10.08□□□□□ -0.8
CUX1-205ENST00000425244 OR4D11Q8NGI4 311 aa10.08□□□□□ -0.8
CUX1-205ENST00000425244 HPS1Q92902 700 aa10.08□□□□□ -0.8
CUX1-205ENST00000425244 RGMAQ96B86 450 aa10.08□□□□□ -0.8
CUX1-205ENST00000425244 QRFPRQ96P65 431 aa10.08□□□□□ -0.8
CUX1-205ENST00000425244 TREX2Q9BQ50 279 aaPredicted RBP10.08□□□□□ -0.8
CUX1-205ENST00000425244 PELI2Q9HAT8 420 aa10.08□□□□□ -0.8
CUX1-205ENST00000425244 SIRT3Q9NTG7 399 aaPredicted RBP10.08□□□□□ -0.8
CUX1-205ENST00000425244 SACM1LQ9NTJ5 587 aa10.08□□□□□ -0.8
CUX1-205ENST00000425244 KCNK6Q9Y257 313 aa10.08□□□□□ -0.8
CUX1-205ENST00000425244 KIAA0513O60268 411 aa10.07□□□□□ -0.8
CUX1-205ENST00000425244 ERAL1O75616 437 aaKnown RBP10.07□□□□□ -0.8
CUX1-205ENST00000425244 DLGAP3O95886 979 aa10.07□□□□□ -0.8
CUX1-205ENST00000425244 ALOX5P09917 674 aa10.07□□□□□ -0.8
CUX1-205ENST00000425244 ELAVL4P26378 380 aaKnown RBP10.07□□□□□ -0.8
CUX1-205ENST00000425244 SERPINB1P30740 379 aa10.07□□□□□ -0.8
CUX1-205ENST00000425244 IGFALSP35858 605 aa10.07□□□□□ -0.8
CUX1-205ENST00000425244 UGT2B15P54855 530 aa10.07□□□□□ -0.8
CUX1-205ENST00000425244 REEP5Q00765 189 aa10.07□□□□□ -0.8
CUX1-205ENST00000425244 TARDBPQ13148 414 aaKnown RBP eCLIP10.07□□□□□ -0.89e-7■■■■□ 26.1
CUX1-205ENST00000425244 COL9A2Q14055 689 aaPredicted RBP10.07□□□□□ -0.8
CUX1-205ENST00000425244 DOC2BQ14184 412 aa10.07□□□□□ -0.8
CUX1-205ENST00000425244 KRT33BQ14525 404 aa10.07□□□□□ -0.8
CUX1-205ENST00000425244 METRNLQ641Q3 311 aa10.07□□□□□ -0.8
CUX1-205ENST00000425244 PLAG1Q6DJT9 500 aa10.07□□□□□ -0.8
CUX1-205ENST00000425244 ADAMTSL4Q6UY14 1074 aa10.07□□□□□ -0.8
CUX1-205ENST00000425244 WDR53Q7Z5U6 358 aaPredicted RBP10.07□□□□□ -0.8
CUX1-205ENST00000425244 SLC34A3Q8N130 599 aa10.07□□□□□ -0.8
CUX1-205ENST00000425244 POC5Q8NA72 575 aa10.07□□□□□ -0.8
CUX1-205ENST00000425244 LINC01555Q8NAE3 123 aa10.07□□□□□ -0.8
CUX1-205ENST00000425244 TP53I13Q8NBR0 393 aaPredicted RBP10.07□□□□□ -0.8
CUX1-205ENST00000425244 FAM83FQ8NEG4 500 aaPredicted RBP10.07□□□□□ -0.8
CUX1-205ENST00000425244 TSTD1Q8NFU3 115 aa10.07□□□□□ -0.8
CUX1-205ENST00000425244 CRELD1Q96HD1 420 aa10.07□□□□□ -0.8
CUX1-205ENST00000425244 COX14Q96I36 57 aa10.07□□□□□ -0.8
CUX1-205ENST00000425244 ZNF607Q96SK3 696 aa10.07□□□□□ -0.8
CUX1-205ENST00000425244 CDADC1Q9BWV3 514 aa10.07□□□□□ -0.8
CUX1-205ENST00000425244 NDEL1Q9GZM8 345 aa10.07□□□□□ -0.8
CUX1-205ENST00000425244 POLR2J3Q9H1A7 115 aaKnown RBP10.07□□□□□ -0.8
CUX1-205ENST00000425244 OR51I1Q9H343 314 aa10.07□□□□□ -0.8
CUX1-205ENST00000425244 SERHL2Q9H4I8 314 aa10.07□□□□□ -0.8
CUX1-205ENST00000425244 ZCCHC3Q9NUD5 404 aaKnown RBP10.07□□□□□ -0.8
CUX1-205ENST00000425244 MUTYHQ9UIF7 546 aa10.07□□□□□ -0.8
CUX1-205ENST00000425244 KCND3Q9UK17 655 aa10.07□□□□□ -0.8
CUX1-205ENST00000425244 CAB39Q9Y376 341 aaPredicted RBP10.07□□□□□ -0.8
CUX1-205ENST00000425244 A8MVJ9 347 aa10.07□□□□□ -0.8
CUX1-205ENST00000425244 MPZL2O60487 215 aa10.07□□□□□ -0.8
CUX1-205ENST00000425244 PEX14O75381 377 aa10.07□□□□□ -0.8
CUX1-205ENST00000425244 UGT2B17O75795 530 aa10.07□□□□□ -0.8
CUX1-205ENST00000425244 UPK1BO75841 260 aa10.07□□□□□ -0.8
CUX1-205ENST00000425244 PDE9AO76083 593 aa10.07□□□□□ -0.8
CUX1-205ENST00000425244 ADAP00813 363 aa10.07□□□□□ -0.8
CUX1-205ENST00000425244 OSMP13725 252 aa10.07□□□□□ -0.8
CUX1-205ENST00000425244 SOX3P41225 446 aa10.07□□□□□ -0.8
CUX1-205ENST00000425244 XKP51811 444 aa10.07□□□□□ -0.8
CUX1-205ENST00000425244 NCBP2P52298 156 aaKnown RBP eCLIP10.07□□□□□ -0.82e-6■■□□□ 13
CUX1-205ENST00000425244 IRF3Q14653 427 aa10.07□□□□□ -0.8
CUX1-205ENST00000425244 FAM209AQ5JX71 171 aa10.07□□□□□ -0.8
CUX1-205ENST00000425244 NDUFAF5Q5TEU4 345 aa10.07□□□□□ -0.8
CUX1-205ENST00000425244 KIAA1161Q6NSJ0 714 aa10.07□□□□□ -0.8
CUX1-205ENST00000425244 CASP12Q6UXS9 341 aa10.07□□□□□ -0.8
CUX1-205ENST00000425244 UBE3DQ7Z6J8 389 aa10.07□□□□□ -0.8
CUX1-205ENST00000425244 APOBEC4Q8WW27 367 aaKnown RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms