RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 C2orf92A0A1B0GVN3 265 aa17.07■□□□□ 0.32
HDAC6-205ENST00000423941 PDPK1O15530 556 aa17.07■□□□□ 0.32
HDAC6-205ENST00000423941 LAMP1P11279 417 aa17.07■□□□□ 0.32
HDAC6-205ENST00000423941 GPX3P22352 226 aa17.07■□□□□ 0.32
HDAC6-205ENST00000423941 NTSP30990 170 aa17.07■□□□□ 0.32
HDAC6-205ENST00000423941 ST13P50502 369 aaKnown RBP17.07■□□□□ 0.32
HDAC6-205ENST00000423941 NCBP2P52298 156 aaKnown RBP eCLIP17.07■□□□□ 0.32
HDAC6-205ENST00000423941 OR1C1Q15619 314 aa17.07■□□□□ 0.32
HDAC6-205ENST00000423941 ZNF791Q3KP31 576 aaPredicted RBP17.07■□□□□ 0.32
HDAC6-205ENST00000423941 HSP90B2PQ58FF3 399 aa17.07■□□□□ 0.32
HDAC6-205ENST00000423941 SPINK14Q6IE38 97 aa17.07■□□□□ 0.32
HDAC6-205ENST00000423941 OR2L13Q8N349 312 aa17.07■□□□□ 0.32
HDAC6-205ENST00000423941 HORMAD2Q8N7B1 307 aa17.07■□□□□ 0.32
HDAC6-205ENST00000423941 PSMA8Q8TAA3 256 aa17.07■□□□□ 0.32
HDAC6-205ENST00000423941 NUDT8Q8WV74 236 aa17.07■□□□□ 0.32
HDAC6-205ENST00000423941 STON2Q8WXE9 905 aa17.07■□□□□ 0.32
HDAC6-205ENST00000423941 KAT2AQ92830 837 aa17.07■□□□□ 0.32
HDAC6-205ENST00000423941 CIDECQ96AQ7 238 aaPredicted RBP17.07■□□□□ 0.32
HDAC6-205ENST00000423941 ELP4Q96EB1 424 aa17.07■□□□□ 0.32
HDAC6-205ENST00000423941 ZBED6CLQ96FA7 236 aaPredicted RBP17.07■□□□□ 0.32
HDAC6-205ENST00000423941 ANKRD10Q9NXR5 420 aa17.07■□□□□ 0.32
HDAC6-205ENST00000423941 MAP10Q9P2G4 905 aa17.07■□□□□ 0.32
HDAC6-205ENST00000423941 DTX4Q9Y2E6 619 aa17.07■□□□□ 0.32
HDAC6-205ENST00000423941 HEMK1Q9Y5R4 338 aaPredicted RBP17.07■□□□□ 0.32
HDAC6-205ENST00000423941 GPR45Q9Y5Y3 372 aa17.07■□□□□ 0.32
HDAC6-205ENST00000423941 PRRC2CQ9Y520 2896 aaKnown RBP17.07■□□□□ 0.32
HDAC6-205ENST00000423941 SHANK1Q9Y566 2161 aa17.06■□□□□ 0.32
HDAC6-205ENST00000423941 UPK1AO00322 258 aa17.06■□□□□ 0.32
HDAC6-205ENST00000423941 DYNC1I1O14576 645 aa17.06■□□□□ 0.32
HDAC6-205ENST00000423941 EDF1O60869 148 aaKnown RBP17.06■□□□□ 0.32
HDAC6-205ENST00000423941 OR6B1O95007 311 aa17.06■□□□□ 0.32
HDAC6-205ENST00000423941 SP1P08047 785 aa17.06■□□□□ 0.32
HDAC6-205ENST00000423941 DDX5P17844 614 aaKnown RBP17.06■□□□□ 0.32
HDAC6-205ENST00000423941 DRD5P21918 477 aa17.06■□□□□ 0.32
HDAC6-205ENST00000423941 HPCAL1P37235 193 aa17.06■□□□□ 0.32
HDAC6-205ENST00000423941 SOX3P41225 446 aa17.06■□□□□ 0.32
HDAC6-205ENST00000423941 PPICP45877 212 aa17.06■□□□□ 0.32
HDAC6-205ENST00000423941 INPP5JQ15735 1006 aaPredicted RBP17.06■□□□□ 0.32
HDAC6-205ENST00000423941 INAQ16352 499 aa17.06■□□□□ 0.32
HDAC6-205ENST00000423941 OPN5Q6U736 354 aa17.06■□□□□ 0.32
HDAC6-205ENST00000423941 ZNF551Q7Z340 670 aaPredicted RBP17.06■□□□□ 0.32
HDAC6-205ENST00000423941 TMEM156Q8N614 296 aa17.06■□□□□ 0.32
HDAC6-205ENST00000423941 OR52R1Q8NGF1 315 aa17.06■□□□□ 0.32
HDAC6-205ENST00000423941 CEP70Q8NHQ1 597 aa17.06■□□□□ 0.32
HDAC6-205ENST00000423941 HOXB13Q92826 284 aaPredicted RBP17.06■□□□□ 0.32
HDAC6-205ENST00000423941 TESCQ96BS2 214 aa17.06■□□□□ 0.32
HDAC6-205ENST00000423941 OR52B2Q96RD2 323 aa17.06■□□□□ 0.32
HDAC6-205ENST00000423941 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.06■□□□□ 0.32
HDAC6-205ENST00000423941 ANKRA2Q9H9E1 313 aa17.06■□□□□ 0.32
HDAC6-205ENST00000423941 SH2D2AQ9NP31 389 aa17.06■□□□□ 0.32
HDAC6-205ENST00000423941 PRODH2Q9UF12 536 aa17.06■□□□□ 0.32
HDAC6-205ENST00000423941 NUP214P35658 2090 aaPredicted RBP17.06■□□□□ 0.32
HDAC6-205ENST00000423941 GOLGA8QA0A0J9YX86 632 aa17.05■□□□□ 0.32
HDAC6-205ENST00000423941 GOLGA8OA6NCC3 632 aa17.05■□□□□ 0.32
HDAC6-205ENST00000423941 GOLGA8NF8WBI6 632 aa17.05■□□□□ 0.32
HDAC6-205ENST00000423941 SCN2BO60939 215 aa17.05■□□□□ 0.32
HDAC6-205ENST00000423941 FBXO45P0C2W1 286 aa17.05■□□□□ 0.32
HDAC6-205ENST00000423941 IDH3AP50213 366 aa17.05■□□□□ 0.32
HDAC6-205ENST00000423941 WNT3P56703 355 aa17.05■□□□□ 0.32
HDAC6-205ENST00000423941 DCAF7P61962 342 aa17.05■□□□□ 0.32
HDAC6-205ENST00000423941 OC90Q02509 493 aaPredicted RBP17.05■□□□□ 0.32
HDAC6-205ENST00000423941 LSM12Q3MHD2 195 aaKnown RBP17.05■□□□□ 0.32
HDAC6-205ENST00000423941 ZNF766Q5HY98 468 aa17.05■□□□□ 0.32
HDAC6-205ENST00000423941 CPTPQ5TA50 214 aa17.05■□□□□ 0.32
HDAC6-205ENST00000423941 ZNF324BQ6AW86 544 aaPredicted RBP17.05■□□□□ 0.32
HDAC6-205ENST00000423941 SLC25A25Q6KCM7 469 aa17.05■□□□□ 0.32
HDAC6-205ENST00000423941 OR8J2Q8NGG1 315 aa17.05■□□□□ 0.32
HDAC6-205ENST00000423941 SNRNP40Q96DI7 357 aaKnown RBP17.05■□□□□ 0.32
HDAC6-205ENST00000423941 VSTM2LQ96N03 204 aa17.05■□□□□ 0.32
HDAC6-205ENST00000423941 BTBD9Q96Q07 612 aa17.05■□□□□ 0.32
HDAC6-205ENST00000423941 PRPF18Q99633 342 aaKnown RBP17.05■□□□□ 0.32
HDAC6-205ENST00000423941 BHLHE41Q9C0J9 482 aaPredicted RBP17.05■□□□□ 0.32
HDAC6-205ENST00000423941 CCDC134Q9H6E4 229 aa17.05■□□□□ 0.32
HDAC6-205ENST00000423941 ATAD3AQ9NVI7 634 aa17.05■□□□□ 0.32
HDAC6-205ENST00000423941 LUZP4Q9P127 313 aa17.05■□□□□ 0.32
HDAC6-205ENST00000423941 BCAP29Q9UHQ4 241 aa17.05■□□□□ 0.32
HDAC6-205ENST00000423941 NTNG1Q9Y2I2 539 aa17.05■□□□□ 0.32
HDAC6-205ENST00000423941 GPR55Q9Y2T6 319 aaPredicted RBP17.05■□□□□ 0.32
HDAC6-205ENST00000423941 ZNF462Q96JM2 2506 aa17.05■□□□□ 0.32
HDAC6-205ENST00000423941 TTLL8A6PVC2 850 aa17.04■□□□□ 0.32
HDAC6-205ENST00000423941 TO15178 435 aa17.04■□□□□ 0.32
HDAC6-205ENST00000423941 NME2P1O60361 137 aa17.04■□□□□ 0.32
HDAC6-205ENST00000423941 CT45A8P0DMV1 189 aa17.04■□□□□ 0.32
HDAC6-205ENST00000423941 CT45A9P0DMV2 189 aa17.04■□□□□ 0.32
HDAC6-205ENST00000423941 CD46P15529 392 aa17.04■□□□□ 0.32
HDAC6-205ENST00000423941 NAGAP17050 411 aa17.04■□□□□ 0.32
HDAC6-205ENST00000423941 NME2P22392 152 aa17.04■□□□□ 0.32
HDAC6-205ENST00000423941 MAP3K8P41279 467 aa17.04■□□□□ 0.32
HDAC6-205ENST00000423941 MC3RP41968 323 aa17.04■□□□□ 0.32
HDAC6-205ENST00000423941 MRPL19P49406 292 aaKnown RBP17.04■□□□□ 0.32
HDAC6-205ENST00000423941 NR0B1P51843 470 aaKnown RBP17.04■□□□□ 0.32
HDAC6-205ENST00000423941 MANFP55145 182 aaKnown RBP17.04■□□□□ 0.32
HDAC6-205ENST00000423941 PHC1P78364 1004 aa17.04■□□□□ 0.32
HDAC6-205ENST00000423941 SRSF11Q05519 484 aaKnown RBP17.04■□□□□ 0.32
HDAC6-205ENST00000423941 CT45A2Q5DJT8 189 aa17.04■□□□□ 0.32
HDAC6-205ENST00000423941 FAM47EQ6ZV65 393 aa17.04■□□□□ 0.32
HDAC6-205ENST00000423941 MDGA2Q7Z553 956 aa17.04■□□□□ 0.32
HDAC6-205ENST00000423941 ZNF605Q86T29 641 aa17.04■□□□□ 0.32
HDAC6-205ENST00000423941 DND1Q8IYX4 353 aaKnown RBP17.04■□□□□ 0.32
HDAC6-205ENST00000423941 CYP4Z2PQ8N1L4 340 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 119.8 ms