RNA–Protein interactions for RNA: ENST00000423368.6

CNOT4-205, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT4, Length 3,297 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-205ENST00000423368 ZNF583Q96ND8 569 aa6.51□□□□□ -1.37
CNOT4-205ENST00000423368 HHIPQ96QV1 700 aa6.51□□□□□ -1.37
CNOT4-205ENST00000423368 MRPL57Q9BQC6 102 aaKnown RBP6.51□□□□□ -1.37
CNOT4-205ENST00000423368 TMED9Q9BVK6 235 aa6.51□□□□□ -1.37
CNOT4-205ENST00000423368 PDZD7Q9H5P4 517 aa6.51□□□□□ -1.37
CNOT4-205ENST00000423368 QTRT2Q9H974 415 aaKnown RBP6.51□□□□□ -1.37
CNOT4-205ENST00000423368 MED16Q9Y2X0 877 aa6.51□□□□□ -1.37
CNOT4-205ENST00000423368 CHD3Q12873 2000 aaKnown RBP6.51□□□□□ -1.37
CNOT4-205ENST00000423368 A0A075B6Q4 140 aa6.51□□□□□ -1.37
CNOT4-205ENST00000423368 ELOVL7A1L3X0 281 aa6.51□□□□□ -1.37
CNOT4-205ENST00000423368 C5orf52A6NGY3 159 aa6.51□□□□□ -1.37
CNOT4-205ENST00000423368 QSOX1O00391 747 aa6.51□□□□□ -1.37
CNOT4-205ENST00000423368 KCNAB3O43448 404 aa6.51□□□□□ -1.37
CNOT4-205ENST00000423368 PRAMEF2O60811 474 aa6.51□□□□□ -1.37
CNOT4-205ENST00000423368 AOC2O75106 756 aa6.51□□□□□ -1.37
CNOT4-205ENST00000423368 TCRBP04435 133 aa6.51□□□□□ -1.37
CNOT4-205ENST00000423368 RHOP08100 348 aa6.51□□□□□ -1.37
CNOT4-205ENST00000423368 ATXN1LP0C7T5 689 aaKnown RBP6.51□□□□□ -1.37
CNOT4-205ENST00000423368 CPT2P23786 658 aa6.51□□□□□ -1.37
CNOT4-205ENST00000423368 CCND3P30281 292 aaPredicted RBP6.51□□□□□ -1.37
CNOT4-205ENST00000423368 ARL4AP40617 200 aa6.51□□□□□ -1.37
CNOT4-205ENST00000423368 RAB10P61026 200 aa6.51□□□□□ -1.37
CNOT4-205ENST00000423368 DOC2AQ14183 400 aa6.51□□□□□ -1.37
CNOT4-205ENST00000423368 GRB14Q14449 540 aa6.51□□□□□ -1.37
CNOT4-205ENST00000423368 CCDC157Q569K6 752 aa6.51□□□□□ -1.37
CNOT4-205ENST00000423368 TCEAL6Q6IPX3 200 aa6.51□□□□□ -1.37
CNOT4-205ENST00000423368 THEM5Q8N1Q8 247 aa6.51□□□□□ -1.37
CNOT4-205ENST00000423368 SLC43A2Q8N370 569 aa6.51□□□□□ -1.37
CNOT4-205ENST00000423368 METTL27Q8N6F8 245 aaPredicted RBP6.51□□□□□ -1.37
CNOT4-205ENST00000423368 FCGR1BQ92637 280 aa6.51□□□□□ -1.37
CNOT4-205ENST00000423368 FOXRED1Q96CU9 486 aaPredicted RBP6.51□□□□□ -1.37
CNOT4-205ENST00000423368 TMEM209Q96SK2 561 aa6.51□□□□□ -1.37
CNOT4-205ENST00000423368 PKP4Q99569 1192 aa6.51□□□□□ -1.37
CNOT4-205ENST00000423368 FEVQ99581 238 aa6.51□□□□□ -1.37
CNOT4-205ENST00000423368 HSD17B14Q9BPX1 270 aa6.51□□□□□ -1.37
CNOT4-205ENST00000423368 ISCA1Q9BUE6 129 aa6.51□□□□□ -1.37
CNOT4-205ENST00000423368 DUSP26Q9BV47 211 aa6.51□□□□□ -1.37
CNOT4-205ENST00000423368 B3GNT5Q9BYG0 378 aa6.51□□□□□ -1.37
CNOT4-205ENST00000423368 SLC6A16Q9GZN6 736 aa6.51□□□□□ -1.37
CNOT4-205ENST00000423368 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.51□□□□□ -1.37
CNOT4-205ENST00000423368 C11orf49Q9H6J7 331 aa6.51□□□□□ -1.37
CNOT4-205ENST00000423368 TPT1P8Q9HAU6 139 aa6.51□□□□□ -1.37
CNOT4-205ENST00000423368 EMC7Q9NPA0 242 aa6.51□□□□□ -1.37
CNOT4-205ENST00000423368 AKAP7Q9P0M2 348 aaPredicted RBP6.51□□□□□ -1.37
CNOT4-205ENST00000423368 PPP4R1LQ9P1A2 415 aa6.51□□□□□ -1.37
CNOT4-205ENST00000423368 PLEKHB1Q9UF11 243 aaPredicted RBP6.51□□□□□ -1.37
CNOT4-205ENST00000423368 EPHA6Q9UF33 1036 aa6.51□□□□□ -1.37
CNOT4-205ENST00000423368 CNTN6Q9UQ52 1028 aa6.51□□□□□ -1.37
CNOT4-205ENST00000423368 AP1M2Q9Y6Q5 423 aa6.51□□□□□ -1.37
CNOT4-205ENST00000423368 MYO9BQ13459 2157 aa6.51□□□□□ -1.37
CNOT4-205ENST00000423368 ANKRD36CQ5JPF3 1778 aa6.51□□□□□ -1.37
CNOT4-205ENST00000423368 A0A087X1B8 175 aa6.51□□□□□ -1.37
CNOT4-205ENST00000423368 A0A1W2PRU2 124 aa6.51□□□□□ -1.37
CNOT4-205ENST00000423368 TMEM82A0PJX8 343 aa6.51□□□□□ -1.37
CNOT4-205ENST00000423368 BBIP1A8MTZ0 92 aa6.51□□□□□ -1.37
CNOT4-205ENST00000423368 MPTX1A8MV57 137 aa6.51□□□□□ -1.37
CNOT4-205ENST00000423368 UPK3BL1B0FP48 263 aa6.51□□□□□ -1.37
CNOT4-205ENST00000423368 UPK3BL2E5RIL1 263 aa6.51□□□□□ -1.37
CNOT4-205ENST00000423368 DVL2O14641 736 aa6.51□□□□□ -1.37
CNOT4-205ENST00000423368 AZIN1O14977 448 aa6.51□□□□□ -1.37
CNOT4-205ENST00000423368 MBTPS2O43462 519 aa6.51□□□□□ -1.37
CNOT4-205ENST00000423368 FZD7O75084 574 aa6.51□□□□□ -1.37
CNOT4-205ENST00000423368 TRIM3O75382 744 aaPredicted RBP6.51□□□□□ -1.37
CNOT4-205ENST00000423368 STBD1O95210 358 aa6.51□□□□□ -1.37
CNOT4-205ENST00000423368 OPN1SWP03999 348 aa6.51□□□□□ -1.37
CNOT4-205ENST00000423368 OR8U8P0C7N1 319 aa6.51□□□□□ -1.37
CNOT4-205ENST00000423368 MAPTP10636 758 aaKnown RBP6.51□□□□□ -1.37
CNOT4-205ENST00000423368 ITGAMP11215 1152 aa6.51□□□□□ -1.37
CNOT4-205ENST00000423368 GOT1P17174 413 aa6.51□□□□□ -1.37
CNOT4-205ENST00000423368 ITGB5P18084 799 aa6.51□□□□□ -1.37
CNOT4-205ENST00000423368 MST1P26927 711 aa6.51□□□□□ -1.37
CNOT4-205ENST00000423368 ABCD3P28288 659 aa6.51□□□□□ -1.37
CNOT4-205ENST00000423368 HTR1EP28566 365 aa6.51□□□□□ -1.37
CNOT4-205ENST00000423368 BMP8BP34820 402 aa6.51□□□□□ -1.37
CNOT4-205ENST00000423368 CRATP43155 626 aa6.51□□□□□ -1.37
CNOT4-205ENST00000423368 OR1E2P47887 323 aa6.51□□□□□ -1.37
CNOT4-205ENST00000423368 MAXP61244 160 aa6.51□□□□□ -1.37
CNOT4-205ENST00000423368 VLDLRP98155 873 aa6.51□□□□□ -1.37
CNOT4-205ENST00000423368 IRF8Q02556 426 aa6.51□□□□□ -1.37
CNOT4-205ENST00000423368 OR2G6Q5TZ20 316 aa6.51□□□□□ -1.37
CNOT4-205ENST00000423368 TMEM108Q6UXF1 575 aa6.51□□□□□ -1.37
CNOT4-205ENST00000423368 GSG1LQ6UXU4 331 aa6.51□□□□□ -1.37
CNOT4-205ENST00000423368 SAMD7Q7Z3H4 446 aa6.51□□□□□ -1.37
CNOT4-205ENST00000423368 BMP8AQ7Z5Y6 402 aa6.51□□□□□ -1.37
CNOT4-205ENST00000423368 NKAIN4Q8IVV8 208 aa6.51□□□□□ -1.37
CNOT4-205ENST00000423368 FAM26EQ8N5C1 309 aa6.51□□□□□ -1.37
CNOT4-205ENST00000423368 DUSP18Q8NEJ0 188 aa6.51□□□□□ -1.37
CNOT4-205ENST00000423368 SCARB1Q8WTV0 552 aa6.51□□□□□ -1.37
CNOT4-205ENST00000423368 PIH1D2Q8WWB5 315 aa6.51□□□□□ -1.37
CNOT4-205ENST00000423368 CPNE4Q96A23 557 aaPredicted RBP6.51□□□□□ -1.37
CNOT4-205ENST00000423368 FAM120BQ96EK7 910 aaKnown RBP6.51□□□□□ -1.37
CNOT4-205ENST00000423368 THAP7Q9BT49 309 aaPredicted RBP6.51□□□□□ -1.37
CNOT4-205ENST00000423368 SNRNP25Q9BV90 132 aaKnown RBP6.51□□□□□ -1.37
CNOT4-205ENST00000423368 POLDIP3Q9BY77 421 aaKnown RBP6.51□□□□□ -1.37
CNOT4-205ENST00000423368 RPS10P5Q9NQ39 176 aa6.51□□□□□ -1.37
CNOT4-205ENST00000423368 CISHQ9NSE2 258 aa6.51□□□□□ -1.37
CNOT4-205ENST00000423368 RNF146Q9NTX7 359 aa6.51□□□□□ -1.37
CNOT4-205ENST00000423368 SRRDQ9UH36 339 aa6.51□□□□□ -1.37
CNOT4-205ENST00000423368 SCP2D1Q9UJQ7 156 aa6.51□□□□□ -1.37
CNOT4-205ENST00000423368 ZNFX1Q9P2E3 1918 aaKnown RBP6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms