RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 PRR18Q8N4B5 295 aa6.46□□□□□ -1.38
HMGN1-205ENST00000419378 RNF175Q8N4F7 328 aa6.46□□□□□ -1.38
HMGN1-205ENST00000419378 FAM47BQ8NA70 645 aa6.46□□□□□ -1.38
HMGN1-205ENST00000419378 SRFBP1Q8NEF9 429 aaKnown RBP6.46□□□□□ -1.38
HMGN1-205ENST00000419378 OR52B6Q8NGF0 335 aa6.46□□□□□ -1.38
HMGN1-205ENST00000419378 OR14K1Q8NGZ2 314 aa6.46□□□□□ -1.38
HMGN1-205ENST00000419378 HUS1BQ8NHY5 278 aa6.46□□□□□ -1.38
HMGN1-205ENST00000419378 DNAJB14Q8TBM8 379 aa6.46□□□□□ -1.38
HMGN1-205ENST00000419378 M1APQ8TC57 530 aa6.46□□□□□ -1.38
HMGN1-205ENST00000419378 SNRNP40Q96DI7 357 aaKnown RBP6.46□□□□□ -1.38
HMGN1-205ENST00000419378 PHF21BQ96EK2 531 aa6.46□□□□□ -1.38
HMGN1-205ENST00000419378 C19orf60Q96EN9 201 aa6.46□□□□□ -1.38
HMGN1-205ENST00000419378 CMTM7Q96FZ5 175 aa6.46□□□□□ -1.38
HMGN1-205ENST00000419378 CSF3RQ99062 836 aa6.46□□□□□ -1.38
HMGN1-205ENST00000419378 SCN2AQ99250 2005 aa6.46□□□□□ -1.38
HMGN1-205ENST00000419378 MRPL57Q9BQC6 102 aaKnown RBP6.46□□□□□ -1.38
HMGN1-205ENST00000419378 MRPL46Q9H2W6 279 aaKnown RBP6.46□□□□□ -1.38
HMGN1-205ENST00000419378 NOL11Q9H8H0 719 aaKnown RBP6.46□□□□□ -1.38
HMGN1-205ENST00000419378 KCNK13Q9HB14 408 aa6.46□□□□□ -1.38
HMGN1-205ENST00000419378 ZBTB26Q9HCK0 441 aa6.46□□□□□ -1.38
HMGN1-205ENST00000419378 MMP25Q9NPA2 562 aa6.46□□□□□ -1.38
HMGN1-205ENST00000419378 NECTIN3Q9NQS3 549 aa6.46□□□□□ -1.38
HMGN1-205ENST00000419378 ING3Q9NXR8 418 aa6.46□□□□□ -1.38
HMGN1-205ENST00000419378 PLA2G3Q9NZ20 509 aa6.46□□□□□ -1.38
HMGN1-205ENST00000419378 PSMC3IPQ9P2W1 217 aaPredicted RBP6.46□□□□□ -1.38
HMGN1-205ENST00000419378 FETUBQ9UGM5 382 aa6.46□□□□□ -1.38
HMGN1-205ENST00000419378 PCTPQ9UKL6 214 aa6.46□□□□□ -1.38
HMGN1-205ENST00000419378 DAPP1Q9UN19 280 aa6.46□□□□□ -1.38
HMGN1-205ENST00000419378 VPS4AQ9UN37 437 aa6.46□□□□□ -1.38
HMGN1-205ENST00000419378 TSC22D4Q9Y3Q8 395 aa6.46□□□□□ -1.38
HMGN1-205ENST00000419378 MMACHCQ9Y4U1 282 aa6.46□□□□□ -1.38
HMGN1-205ENST00000419378 CLDN16Q9Y5I7 305 aa6.46□□□□□ -1.38
HMGN1-205ENST00000419378 DYTNA2CJ06 578 aa6.45□□□□□ -1.38
HMGN1-205ENST00000419378 OR5H15A6NDH6 313 aa6.45□□□□□ -1.38
HMGN1-205ENST00000419378 SAGE2PA6NJ88 616 aa6.45□□□□□ -1.38
HMGN1-205ENST00000419378 A8MT66 165 aa6.45□□□□□ -1.38
HMGN1-205ENST00000419378 A8MUI8 341 aa6.45□□□□□ -1.38
HMGN1-205ENST00000419378 CLDN9O95484 217 aa6.45□□□□□ -1.38
HMGN1-205ENST00000419378 WDPCPO95876 746 aa6.45□□□□□ -1.38
HMGN1-205ENST00000419378 F10P00742 488 aa6.45□□□□□ -1.38
HMGN1-205ENST00000419378 SHBGP04278 402 aa6.45□□□□□ -1.38
HMGN1-205ENST00000419378 RPS17P08708 135 aaKnown RBP6.45□□□□□ -1.38
HMGN1-205ENST00000419378 HIST1H1TP22492 207 aaPredicted RBP6.45□□□□□ -1.38
HMGN1-205ENST00000419378 GNLYP22749 145 aa6.45□□□□□ -1.38
HMGN1-205ENST00000419378 ATP5A1P25705 553 aaKnown RBP6.45□□□□□ -1.38
HMGN1-205ENST00000419378 PPP2R1BP30154 601 aa6.45□□□□□ -1.38
HMGN1-205ENST00000419378 GNALP38405 381 aa6.45□□□□□ -1.38
HMGN1-205ENST00000419378 ARL1P40616 181 aaPredicted RBP6.45□□□□□ -1.38
HMGN1-205ENST00000419378 PIK3CBP42338 1070 aa6.45□□□□□ -1.38
HMGN1-205ENST00000419378 SSR2P43308 183 aa6.45□□□□□ -1.38
HMGN1-205ENST00000419378 UQCRFS1P47985 274 aa6.45□□□□□ -1.38
HMGN1-205ENST00000419378 TNFSF10P50591 281 aa6.45□□□□□ -1.38
HMGN1-205ENST00000419378 LIM2P55344 173 aa6.45□□□□□ -1.38
HMGN1-205ENST00000419378 HSD17B7P56937 341 aa6.45□□□□□ -1.38
HMGN1-205ENST00000419378 RPS13P62277 151 aaKnown RBP6.45□□□□□ -1.38
HMGN1-205ENST00000419378 PHEXP78562 749 aa6.45□□□□□ -1.38
HMGN1-205ENST00000419378 ZNF33BQ06732 778 aa6.45□□□□□ -1.38
HMGN1-205ENST00000419378 TRAF3Q13114 568 aa6.45□□□□□ -1.38
HMGN1-205ENST00000419378 ZRSR2Q15696 482 aaKnown RBP6.45□□□□□ -1.38
HMGN1-205ENST00000419378 AP5B1Q2VPB7 878 aa6.45□□□□□ -1.38
HMGN1-205ENST00000419378 C19orf54Q5BKX5 351 aa6.45□□□□□ -1.38
HMGN1-205ENST00000419378 ACER2Q5QJU3 275 aa6.45□□□□□ -1.38
HMGN1-205ENST00000419378 ABHD17BQ5VST6 288 aa6.45□□□□□ -1.38
HMGN1-205ENST00000419378 FCRLBQ6BAA4 426 aa6.45□□□□□ -1.38
HMGN1-205ENST00000419378 LCA5Q86VQ0 697 aa6.45□□□□□ -1.38
HMGN1-205ENST00000419378 CRLF3Q8IUI8 442 aa6.45□□□□□ -1.38
HMGN1-205ENST00000419378 ZNF595Q8IYB9 648 aa6.45□□□□□ -1.38
HMGN1-205ENST00000419378 ACOT4Q8N9L9 421 aa6.45□□□□□ -1.38
HMGN1-205ENST00000419378 L3MBTL4Q8NA19 623 aa6.45□□□□□ -1.38
HMGN1-205ENST00000419378 CATSPER1Q8NEC5 780 aa6.45□□□□□ -1.38
HMGN1-205ENST00000419378 WDR20Q8TBZ3 569 aa6.45□□□□□ -1.38
HMGN1-205ENST00000419378 ZNF483Q8TF39 744 aaPredicted RBP6.45□□□□□ -1.38
HMGN1-205ENST00000419378 UBLCP1Q8WVY7 318 aaPredicted RBP6.45□□□□□ -1.38
HMGN1-205ENST00000419378 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.45□□□□□ -1.38
HMGN1-205ENST00000419378 HOXB13Q92826 284 aaPredicted RBP6.45□□□□□ -1.38
HMGN1-205ENST00000419378 SLC7A6OSQ96CW6 309 aaPredicted RBP6.45□□□□□ -1.38
HMGN1-205ENST00000419378 REPS1Q96D71 796 aa6.45□□□□□ -1.38
HMGN1-205ENST00000419378 MTERF1Q99551 399 aaKnown RBP6.45□□□□□ -1.38
HMGN1-205ENST00000419378 NPAS2Q99743 824 aa6.45□□□□□ -1.38
HMGN1-205ENST00000419378 MAPKAP1Q9BPZ7 522 aa6.45□□□□□ -1.38
HMGN1-205ENST00000419378 TBCDQ9BTW9 1192 aa6.45□□□□□ -1.38
HMGN1-205ENST00000419378 SORBS1Q9BX66 1292 aaKnown RBP6.45□□□□□ -1.38
HMGN1-205ENST00000419378 SLC29A3Q9BZD2 475 aa6.45□□□□□ -1.38
HMGN1-205ENST00000419378 ROGDIQ9GZN7 287 aa6.45□□□□□ -1.38
HMGN1-205ENST00000419378 OR51B5Q9H339 312 aa6.45□□□□□ -1.38
HMGN1-205ENST00000419378 ANKZF1Q9H8Y5 726 aa6.45□□□□□ -1.38
HMGN1-205ENST00000419378 LYRM4Q9HD34 91 aa6.45□□□□□ -1.38
HMGN1-205ENST00000419378 SEMA4BQ9NPR2 832 aaPredicted RBP6.45□□□□□ -1.38
HMGN1-205ENST00000419378 PRTFDC1Q9NRG1 225 aa6.45□□□□□ -1.38
HMGN1-205ENST00000419378 ASF1BQ9NVP2 202 aa6.45□□□□□ -1.38
HMGN1-205ENST00000419378 TMEM216Q9P0N5 145 aa6.45□□□□□ -1.38
HMGN1-205ENST00000419378 TBK1Q9UHD2 729 aa6.45□□□□□ -1.38
HMGN1-205ENST00000419378 TEKT2Q9UIF3 430 aa6.45□□□□□ -1.38
HMGN1-205ENST00000419378 MRPS33Q9Y291 106 aaKnown RBP6.45□□□□□ -1.38
HMGN1-205ENST00000419378 NTNG1Q9Y2I2 539 aa6.45□□□□□ -1.38
HMGN1-205ENST00000419378 RNF11Q9Y3C5 154 aa6.45□□□□□ -1.38
HMGN1-205ENST00000419378 SPTAN1Q13813 2472 aaKnown RBP6.44□□□□□ -1.38
HMGN1-205ENST00000419378 HIVEP3Q5T1R4 2406 aa6.44□□□□□ -1.38
HMGN1-205ENST00000419378 TRAV17A0A0B4J275 112 aa6.44□□□□□ -1.38
HMGN1-205ENST00000419378 CLEC18AA5D8T8 446 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms