RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 TRPV2Q9Y5S1 764 aa2.44□□□□□ -2.02
VPS41-206ENST00000418457 UBIAD1Q9Y5Z9 338 aa2.44□□□□□ -2.02
VPS41-206ENST00000418457 AP4B1Q9Y6B7 739 aa2.44□□□□□ -2.02
VPS41-206ENST00000418457 NRXN2Q9P2S2 1712 aa2.44□□□□□ -2.02
VPS41-206ENST00000418457 ZNF646O15015 1829 aaPredicted RBP2.44□□□□□ -2.02
VPS41-206ENST00000418457 PSME4Q14997 1843 aa2.44□□□□□ -2.02
VPS41-206ENST00000418457 ADAMTSL1Q8N6G6 1762 aa2.44□□□□□ -2.02
VPS41-206ENST00000418457 FER1L6Q2WGJ9 1857 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 UBR3Q6ZT12 1888 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 A0A087WYN8 130 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 TCRBV21S2A2A0A5A6 115 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 TRBC2A0A5B9 178 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 ARHGEF37A1IGU5 675 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 SLC15A5A6NIM6 579 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 TRIM64CA6NLI5 447 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 DUXAA6NLW8 204 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 OR6C76A6NM76 312 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 HACD1B0YJ81 288 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 SMIM1B2RUZ4 78 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 E9PI62 339 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 F8VP50 259 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 H3BNH8 94 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 GOLGA8SH3BPF8 625 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 GOLGA8TH3BQL2 631 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 GOLGA8MH3BSY2 632 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 H7C0C1 242 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 KPNA4O00629 521 aaPredicted RBP2.43□□□□□ -2.02
VPS41-206ENST00000418457 CIDEAO60543 219 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 KLHL41O60662 606 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 PLIN3O60664 434 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 LRCH4O75427 683 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 TOM1L1O75674 476 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 BCAS2O75934 225 aaPredicted RBP2.43□□□□□ -2.02
VPS41-206ENST00000418457 OR6B1O95007 311 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 HSPA4LO95757 839 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 TRUB2O95900 331 aaKnown RBP2.43□□□□□ -2.02
VPS41-206ENST00000418457 ASS1P00966 412 aaKnown RBP2.43□□□□□ -2.02
VPS41-206ENST00000418457 TNNC2P02585 160 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 SP1P08047 785 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 ALOX5P09917 674 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 OR2T7P0C7T2 308 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 IGHV4-38-2P0DP08 117 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 HSPA8P11142 646 aaKnown RBP2.43□□□□□ -2.02
VPS41-206ENST00000418457 RALBP11234 206 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 VDRP11473 427 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 KRT3P12035 628 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 P4HA1P13674 534 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 ETS1P14921 441 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 NCF2P19878 526 aaPredicted RBP2.43□□□□□ -2.02
VPS41-206ENST00000418457 ME2P23368 584 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 ALDH1B1P30837 517 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 SPRP35270 261 aaPredicted RBP2.43□□□□□ -2.02
VPS41-206ENST00000418457 TIMP3P35625 211 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 GP5P40197 560 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 MAGEA3P43357 314 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 NAMPTP43490 491 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 ATP5OP48047 213 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 SLC9A3P48764 834 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 NUDT2P50583 147 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 CCR3P51677 355 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 KPNA2P52292 529 aaKnown RBP2.43□□□□□ -2.02
VPS41-206ENST00000418457 CDH11P55287 796 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 TPD52P55327 224 aaPredicted RBP2.43□□□□□ -2.02
VPS41-206ENST00000418457 LINC01547P58512 204 aaPredicted RBP2.43□□□□□ -2.02
VPS41-206ENST00000418457 MYBPC1Q00872 1141 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 ILF2Q12905 390 aaKnown RBP2.43□□□□□ -2.02
VPS41-206ENST00000418457 HSPB3Q12988 150 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 STX5Q13190 355 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 ART3Q13508 389 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 SNTB1Q13884 538 aaKnown RBP2.43□□□□□ -2.02
VPS41-206ENST00000418457 IL11RAQ14626 422 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 MOGQ16653 247 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 NDUFA5Q16718 116 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 KCTD19Q17RG1 926 aaPredicted RBP2.43□□□□□ -2.02
VPS41-206ENST00000418457 LRRC36Q1X8D7 754 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 ZNF829Q3KNS6 432 aaPredicted RBP2.43□□□□□ -2.02
VPS41-206ENST00000418457 ZBED5Q49AG3 693 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 BOLA3Q53S33 107 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 PIGGQ5H8A4 983 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 SPANXN3Q5MJ09 141 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 TCHHL1Q5QJ38 904 aaPredicted RBP2.43□□□□□ -2.02
VPS41-206ENST00000418457 C1QTNF12Q5T7M4 302 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 KRT80Q6KB66 452 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 PRR5LQ6MZQ0 368 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 APOBEC3HQ6NTF7 200 aaKnown RBP2.43□□□□□ -2.02
VPS41-206ENST00000418457 NIPAL1Q6NVV3 410 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 SLC30A6Q6NXT4 461 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 SLC39A4Q6P5W5 647 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 LRRC8BQ6P9F7 803 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 CORO6Q6QEF8 472 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 EPGNQ6UW88 154 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 CEACAM20Q6UY09 585 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 LINGO4Q6UY18 593 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 HACD2Q6Y1H2 254 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 Q6ZTC4 211 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 CDHR3Q6ZTQ4 885 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 NCCRP1Q6ZVX7 275 aaPredicted RBP2.43□□□□□ -2.02
VPS41-206ENST00000418457 LPCAT2Q7L5N7 544 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 KRT74Q7RTS7 529 aa2.43□□□□□ -2.02
VPS41-206ENST00000418457 DGLUCYQ7Z3D6 616 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms