RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 SLC35C2Q9NQQ7 365 aa18.98■□□□□ 0.63
PKNOX1-202ENST00000418336 SACM1LQ9NTJ5 587 aa18.98■□□□□ 0.63
PKNOX1-202ENST00000418336 TUBA8Q9NY65 449 aaPredicted RBP18.98■□□□□ 0.63
PKNOX1-202ENST00000418336 SENP1Q9P0U3 644 aa18.98■□□□□ 0.63
PKNOX1-202ENST00000418336 TINAGQ9UJW2 476 aa18.98■□□□□ 0.63
PKNOX1-202ENST00000418336 ZNF407Q9C0G0 2248 aa18.98■□□□□ 0.63
PKNOX1-202ENST00000418336 A0A1B0GUH1 482 aa18.97■□□□□ 0.63
PKNOX1-202ENST00000418336 LRRC3CA6NJW4 275 aa18.97■□□□□ 0.63
PKNOX1-202ENST00000418336 ADAM10O14672 748 aa18.97■□□□□ 0.63
PKNOX1-202ENST00000418336 ZG16O60844 167 aa18.97■□□□□ 0.63
PKNOX1-202ENST00000418336 DNASE1L1P49184 302 aa18.97■□□□□ 0.63
PKNOX1-202ENST00000418336 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.97■□□□□ 0.63
PKNOX1-202ENST00000418336 XKR7Q5GH72 579 aa18.97■□□□□ 0.63
PKNOX1-202ENST00000418336 SPDYAQ5MJ70 313 aa18.97■□□□□ 0.63
PKNOX1-202ENST00000418336 DND1Q8IYX4 353 aaKnown RBP18.97■□□□□ 0.63
PKNOX1-202ENST00000418336 GHDCQ8N2G8 530 aa18.97■□□□□ 0.63
PKNOX1-202ENST00000418336 OR52R1Q8NGF1 315 aa18.97■□□□□ 0.63
PKNOX1-202ENST00000418336 OR9A2Q8NGT5 310 aa18.97■□□□□ 0.63
PKNOX1-202ENST00000418336 EXOSC8Q96B26 276 aaKnown RBP18.97■□□□□ 0.63
PKNOX1-202ENST00000418336 BRINP2Q9C0B6 783 aa18.97■□□□□ 0.63
PKNOX1-202ENST00000418336 PSME2Q9UL46 239 aa18.97■□□□□ 0.63
PKNOX1-202ENST00000418336 LIPGQ9Y5X9 500 aa18.97■□□□□ 0.63
PKNOX1-202ENST00000418336 NAV2Q8IVL1 2488 aa18.97■□□□□ 0.63
PKNOX1-202ENST00000418336 TFECO14948 347 aaPredicted RBP18.96■□□□□ 0.63
PKNOX1-202ENST00000418336 TUBBP07437 444 aa18.96■□□□□ 0.63
PKNOX1-202ENST00000418336 SERPINB5P36952 375 aa18.96■□□□□ 0.63
PKNOX1-202ENST00000418336 FBXW4P57775 412 aa18.96■□□□□ 0.63
PKNOX1-202ENST00000418336 ADORA2A-AS1P86434 159 aa18.96■□□□□ 0.63
PKNOX1-202ENST00000418336 IMPG1Q17R60 797 aa18.96■□□□□ 0.63
PKNOX1-202ENST00000418336 RFTN2Q52LD8 501 aaPredicted RBP18.96■□□□□ 0.63
PKNOX1-202ENST00000418336 TMEM251Q8N6I4 163 aa18.96■□□□□ 0.63
PKNOX1-202ENST00000418336 OR7G2Q8NG99 324 aa18.96■□□□□ 0.63
PKNOX1-202ENST00000418336 ZBTB9Q96C00 473 aa18.96■□□□□ 0.63
PKNOX1-202ENST00000418336 CCDC120Q96HB5 630 aa18.96■□□□□ 0.63
PKNOX1-202ENST00000418336 IL1RL2Q9HB29 575 aa18.96■□□□□ 0.63
PKNOX1-202ENST00000418336 LRTM1Q9HBL6 345 aa18.96■□□□□ 0.63
PKNOX1-202ENST00000418336 C1orf109Q9NX04 203 aa18.96■□□□□ 0.63
PKNOX1-202ENST00000418336 ZDHHC2Q9UIJ5 367 aa18.96■□□□□ 0.63
PKNOX1-202ENST00000418336 TRAF6Q9Y4K3 522 aa18.96■□□□□ 0.63
PKNOX1-202ENST00000418336 NPFFR2Q9Y5X5 522 aa18.96■□□□□ 0.63
PKNOX1-202ENST00000418336 ZNF780BQ9Y6R6 833 aa18.96■□□□□ 0.63
PKNOX1-202ENST00000418336 UNC79Q9P2D8 2635 aa18.96■□□□□ 0.63
PKNOX1-202ENST00000418336 TRGV8A0A0C4DH27 118 aa18.95■□□□□ 0.62
PKNOX1-202ENST00000418336 A0A1B0GTH9 108 aa18.95■□□□□ 0.62
PKNOX1-202ENST00000418336 A1L4Q6 167 aa18.95■□□□□ 0.62
PKNOX1-202ENST00000418336 FAM166BA8MTA8 275 aa18.95■□□□□ 0.62
PKNOX1-202ENST00000418336 SLC28A1O00337 649 aa18.95■□□□□ 0.62
PKNOX1-202ENST00000418336 TO15178 435 aa18.95■□□□□ 0.62
PKNOX1-202ENST00000418336 RGS16O15492 202 aaPredicted RBP18.95■□□□□ 0.62
PKNOX1-202ENST00000418336 NME6O75414 186 aaPredicted RBP18.95■□□□□ 0.62
PKNOX1-202ENST00000418336 CRCPO75575 148 aa18.95■□□□□ 0.62
PKNOX1-202ENST00000418336 PSMG1O95456 288 aa18.95■□□□□ 0.62
PKNOX1-202ENST00000418336 IGHG3P01860 377 aa18.95■□□□□ 0.62
PKNOX1-202ENST00000418336 CELA3AP09093 270 aa18.95■□□□□ 0.62
PKNOX1-202ENST00000418336 LINC00032P0C843 101 aa18.95■□□□□ 0.62
PKNOX1-202ENST00000418336 SDC1P18827 310 aa18.95■□□□□ 0.62
PKNOX1-202ENST00000418336 ABCD3P28288 659 aa18.95■□□□□ 0.62
PKNOX1-202ENST00000418336 SERPINB4P48594 390 aa18.95■□□□□ 0.62
PKNOX1-202ENST00000418336 PPIAP62937 165 aaKnown RBP18.95■□□□□ 0.62
PKNOX1-202ENST00000418336 C2orf80Q0P641 193 aa18.95■□□□□ 0.62
PKNOX1-202ENST00000418336 CEP85LQ5SZL2 805 aa18.95■□□□□ 0.62
PKNOX1-202ENST00000418336 FNDC7Q5VTL7 733 aa18.95■□□□□ 0.62
PKNOX1-202ENST00000418336 SLC22A10Q63ZE4 541 aa18.95■□□□□ 0.62
PKNOX1-202ENST00000418336 DESI1Q6ICB0 168 aa18.95■□□□□ 0.62
PKNOX1-202ENST00000418336 IKBIPQ70UQ0 350 aa18.95■□□□□ 0.62
PKNOX1-202ENST00000418336 DOLPP1Q86YN1 238 aa18.95■□□□□ 0.62
PKNOX1-202ENST00000418336 TICAM1Q8IUC6 712 aa18.95■□□□□ 0.62
PKNOX1-202ENST00000418336 CLYBLQ8N0X4 340 aa18.95■□□□□ 0.62
PKNOX1-202ENST00000418336 TWIST2Q8WVJ9 160 aa18.95■□□□□ 0.62
PKNOX1-202ENST00000418336 ITLN2Q8WWU7 325 aaPredicted RBP18.95■□□□□ 0.62
PKNOX1-202ENST00000418336 KAT2AQ92830 837 aa18.95■□□□□ 0.62
PKNOX1-202ENST00000418336 HGDQ93099 445 aa18.95■□□□□ 0.62
PKNOX1-202ENST00000418336 ERP27Q96DN0 273 aa18.95■□□□□ 0.62
PKNOX1-202ENST00000418336 PGM2Q96G03 612 aa18.95■□□□□ 0.62
PKNOX1-202ENST00000418336 ZNF764Q96H86 408 aaPredicted RBP18.95■□□□□ 0.62
PKNOX1-202ENST00000418336 PKNOX2Q96KN3 472 aa18.95■□□□□ 0.62
PKNOX1-202ENST00000418336 C3orf30Q96M34 536 aa18.95■□□□□ 0.62
PKNOX1-202ENST00000418336 PHF12Q96QT6 1004 aa18.95■□□□□ 0.62
PKNOX1-202ENST00000418336 C20orf27Q9GZN8 174 aa18.95■□□□□ 0.62
PKNOX1-202ENST00000418336 ZNF395Q9H8N7 513 aaPredicted RBP18.95■□□□□ 0.62
PKNOX1-202ENST00000418336 GIMAP2Q9UG22 337 aa18.95■□□□□ 0.62
PKNOX1-202ENST00000418336 WBP11Q9Y2W2 641 aaKnown RBP18.95■□□□□ 0.62
PKNOX1-202ENST00000418336 ACTL7BQ9Y614 415 aa18.95■□□□□ 0.62
PKNOX1-202ENST00000418336 ANKRD33BA6NCL7 494 aa18.94■□□□□ 0.62
PKNOX1-202ENST00000418336 PIP5K1BO14986 540 aa18.94■□□□□ 0.62
PKNOX1-202ENST00000418336 RGS14O43566 566 aa18.94■□□□□ 0.62
PKNOX1-202ENST00000418336 PLOD3O60568 738 aa18.94■□□□□ 0.62
PKNOX1-202ENST00000418336 TRIM3O75382 744 aaPredicted RBP18.94■□□□□ 0.62
PKNOX1-202ENST00000418336 SEC22BO75396 215 aa18.94■□□□□ 0.62
PKNOX1-202ENST00000418336 LRATO95237 230 aa18.94■□□□□ 0.62
PKNOX1-202ENST00000418336 P04436 131 aa18.94■□□□□ 0.62
PKNOX1-202ENST00000418336 ABCB1P08183 1280 aaPredicted RBP18.94■□□□□ 0.62
PKNOX1-202ENST00000418336 RFPL3SP0C7P2 107 aa18.94■□□□□ 0.62
PKNOX1-202ENST00000418336 PDE7AQ13946 482 aa18.94■□□□□ 0.62
PKNOX1-202ENST00000418336 ZNF385BQ569K4 471 aa18.94■□□□□ 0.62
PKNOX1-202ENST00000418336 EMC4Q5J8M3 183 aa18.94■□□□□ 0.62
PKNOX1-202ENST00000418336 BEND6Q5SZJ8 279 aaPredicted RBP18.94■□□□□ 0.62
PKNOX1-202ENST00000418336 PRAMEF20Q5VT98 475 aa18.94■□□□□ 0.62
PKNOX1-202ENST00000418336 BICRALQ6AI39 1079 aa18.94■□□□□ 0.62
PKNOX1-202ENST00000418336 LRIG3Q6UXM1 1119 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms