RNA–Protein interactions for RNA: ENST00000418309.1

LINC01006-202, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

TSL 3 BASIC

Gene LINC01006, Length 640 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-202ENST00000418309 PPP6CO00743 305 aa12.94□□□□□ -0.34
LINC01006-202ENST00000418309 GNB5O14775 395 aa12.94□□□□□ -0.34
LINC01006-202ENST00000418309 ESRRBO95718 433 aa12.94□□□□□ -0.34
LINC01006-202ENST00000418309 RPS17P08708 135 aaKnown RBP12.94□□□□□ -0.34
LINC01006-202ENST00000418309 SNRPAP09012 282 aaKnown RBP12.94□□□□□ -0.34
LINC01006-202ENST00000418309 CSNK2A2P19784 350 aaPredicted RBP12.94□□□□□ -0.34
LINC01006-202ENST00000418309 BMP5P22003 454 aa12.94□□□□□ -0.34
LINC01006-202ENST00000418309 GPX3P22352 226 aa12.94□□□□□ -0.34
LINC01006-202ENST00000418309 ABCD3P28288 659 aa12.94□□□□□ -0.34
LINC01006-202ENST00000418309 UQCRC1P31930 480 aa12.94□□□□□ -0.34
LINC01006-202ENST00000418309 CASP3P42574 277 aa12.94□□□□□ -0.34
LINC01006-202ENST00000418309 CDK9P50750 372 aaKnown RBP12.94□□□□□ -0.34
LINC01006-202ENST00000418309 EXOSC7Q15024 291 aaKnown RBP12.94□□□□□ -0.34
LINC01006-202ENST00000418309 TESK1Q15569 626 aa12.94□□□□□ -0.34
LINC01006-202ENST00000418309 NNATQ16517 81 aa12.94□□□□□ -0.34
LINC01006-202ENST00000418309 LGSNQ5TDP6 509 aa12.94□□□□□ -0.34
LINC01006-202ENST00000418309 SLC48A1Q6P1K1 146 aa12.94□□□□□ -0.34
LINC01006-202ENST00000418309 LETMD1Q6P1Q0 360 aa12.94□□□□□ -0.34
LINC01006-202ENST00000418309 FAM111BQ6SJ93 734 aa12.94□□□□□ -0.34
LINC01006-202ENST00000418309 ZZZ3Q8IYH5 903 aa12.94□□□□□ -0.34
LINC01006-202ENST00000418309 PM20D2Q8IYS1 436 aa12.94□□□□□ -0.34
LINC01006-202ENST00000418309 MMP21Q8N119 569 aa12.94□□□□□ -0.34
LINC01006-202ENST00000418309 NOA1Q8NC60 698 aaKnown RBP12.94□□□□□ -0.34
LINC01006-202ENST00000418309 MNS1Q8NEH6 495 aa12.94□□□□□ -0.34
LINC01006-202ENST00000418309 ADCY4Q8NFM4 1077 aa12.94□□□□□ -0.34
LINC01006-202ENST00000418309 ZNF483Q8TF39 744 aaPredicted RBP12.94□□□□□ -0.34
LINC01006-202ENST00000418309 DCAKDQ8WVC6 231 aa12.94□□□□□ -0.34
LINC01006-202ENST00000418309 TM4SF18Q96CE8 201 aa12.94□□□□□ -0.34
LINC01006-202ENST00000418309 KLHL29Q96CT2 875 aa12.94□□□□□ -0.34
LINC01006-202ENST00000418309 LRRC46Q96FV0 321 aa12.94□□□□□ -0.34
LINC01006-202ENST00000418309 TIMP4Q99727 224 aa12.94□□□□□ -0.34
LINC01006-202ENST00000418309 FAIM2Q9BWQ8 316 aa12.94□□□□□ -0.34
LINC01006-202ENST00000418309 NXF5Q9H1B4 397 aaKnown RBP12.94□□□□□ -0.34
LINC01006-202ENST00000418309 METTL7AQ9H8H3 244 aa12.94□□□□□ -0.34
LINC01006-202ENST00000418309 BRF2Q9HAW0 419 aa12.94□□□□□ -0.34
LINC01006-202ENST00000418309 PFDN4Q9NQP4 134 aa12.94□□□□□ -0.34
LINC01006-202ENST00000418309 ZNF180Q9UJW8 692 aa12.94□□□□□ -0.34
LINC01006-202ENST00000418309 CES1P1Q9UKY3 287 aa12.94□□□□□ -0.34
LINC01006-202ENST00000418309 ZNF780BQ9Y6R6 833 aa12.94□□□□□ -0.34
LINC01006-202ENST00000418309 MED13LQ71F56 2210 aa12.93□□□□□ -0.34
LINC01006-202ENST00000418309 EXOC1LA0A1B0GW35 172 aa12.93□□□□□ -0.34
LINC01006-202ENST00000418309 A8MT66 165 aa12.93□□□□□ -0.34
LINC01006-202ENST00000418309 DVL2O14641 736 aa12.93□□□□□ -0.34
LINC01006-202ENST00000418309 PPM1BO75688 479 aa12.93□□□□□ -0.34
LINC01006-202ENST00000418309 SUPT7LO94864 414 aa12.93□□□□□ -0.34
LINC01006-202ENST00000418309 OR4F21O95013 312 aa12.93□□□□□ -0.34
LINC01006-202ENST00000418309 EPPINO95925 133 aa12.93□□□□□ -0.34
LINC01006-202ENST00000418309 IL2RAP01589 272 aa12.93□□□□□ -0.34
LINC01006-202ENST00000418309 HPNP05981 417 aa12.93□□□□□ -0.34
LINC01006-202ENST00000418309 ABCB1P08183 1280 aaPredicted RBP12.93□□□□□ -0.34
LINC01006-202ENST00000418309 TAC1P20366 129 aa12.93□□□□□ -0.34
LINC01006-202ENST00000418309 S1PR1P21453 382 aa12.93□□□□□ -0.34
LINC01006-202ENST00000418309 HSD17B3P37058 310 aa12.93□□□□□ -0.34
LINC01006-202ENST00000418309 KIR2DL3P43628 341 aa12.93□□□□□ -0.34
LINC01006-202ENST00000418309 WNT3P56703 355 aa12.93□□□□□ -0.34
LINC01006-202ENST00000418309 RIPPLY3P57055 190 aa12.93□□□□□ -0.34
LINC01006-202ENST00000418309 CRYZQ08257 329 aaKnown RBP12.93□□□□□ -0.34
LINC01006-202ENST00000418309 GALNT1Q10472 559 aaPredicted RBP12.93□□□□□ -0.34
LINC01006-202ENST00000418309 MAP4K2Q12851 820 aa12.93□□□□□ -0.34
LINC01006-202ENST00000418309 SF3B4Q15427 424 aaKnown RBP eCLIP12.93□□□□□ -0.34
LINC01006-202ENST00000418309 PRICKLE4Q2TBC4 344 aa12.93□□□□□ -0.34
LINC01006-202ENST00000418309 ACSF3Q4G176 576 aaPredicted RBP12.93□□□□□ -0.34
LINC01006-202ENST00000418309 EIPR1Q53HC9 387 aa12.93□□□□□ -0.34
LINC01006-202ENST00000418309 FAM180BQ6P0A1 224 aa12.93□□□□□ -0.34
LINC01006-202ENST00000418309 SPNS3Q6ZMD2 512 aa12.93□□□□□ -0.34
LINC01006-202ENST00000418309 SEM1Q6ZVN7 128 aa12.93□□□□□ -0.34
LINC01006-202ENST00000418309 C1orf52Q8N6N3 182 aaKnown RBP12.93□□□□□ -0.34
LINC01006-202ENST00000418309 C17orf47Q8NEP4 570 aa12.93□□□□□ -0.34
LINC01006-202ENST00000418309 TNIP2Q8NFZ5 429 aa12.93□□□□□ -0.34
LINC01006-202ENST00000418309 OR1J4Q8NGS1 313 aa12.93□□□□□ -0.34
LINC01006-202ENST00000418309 HBEGFQ99075 208 aa12.93□□□□□ -0.34
LINC01006-202ENST00000418309 ITPAQ9BY32 194 aa12.93□□□□□ -0.34
LINC01006-202ENST00000418309 KRTAP3-3Q9BYR6 98 aa12.93□□□□□ -0.34
LINC01006-202ENST00000418309 KRTAP3-2Q9BYR7 98 aa12.93□□□□□ -0.34
LINC01006-202ENST00000418309 DNAJB12Q9NXW2 375 aaKnown RBP12.93□□□□□ -0.34
LINC01006-202ENST00000418309 MAT2BQ9NZL9 334 aa12.93□□□□□ -0.34
LINC01006-202ENST00000418309 VPS29Q9UBQ0 182 aa12.93□□□□□ -0.34
LINC01006-202ENST00000418309 TRPS1Q9UHF7 1281 aa12.93□□□□□ -0.34
LINC01006-202ENST00000418309 DTX4Q9Y2E6 619 aa12.93□□□□□ -0.34
LINC01006-202ENST00000418309 C15orf41Q9Y2V0 281 aa12.93□□□□□ -0.34
LINC01006-202ENST00000418309 L3MBTL1Q9Y468 752 aa12.93□□□□□ -0.34
LINC01006-202ENST00000418309 C2orf72A6NCS6 295 aa12.92□□□□□ -0.34
LINC01006-202ENST00000418309 KDM4EB2RXH2 506 aaPredicted RBP12.92□□□□□ -0.34
LINC01006-202ENST00000418309 SYT5O00445 386 aa12.92□□□□□ -0.34
LINC01006-202ENST00000418309 CDH16O75309 829 aa12.92□□□□□ -0.34
LINC01006-202ENST00000418309 KRT6AP02538 564 aa12.92□□□□□ -0.34
LINC01006-202ENST00000418309 KRT6BP04259 564 aa12.92□□□□□ -0.34
LINC01006-202ENST00000418309 ATP1B1P05026 303 aa12.92□□□□□ -0.34
LINC01006-202ENST00000418309 CTAGE8P0CG41 777 aa12.92□□□□□ -0.34
LINC01006-202ENST00000418309 CD1EP15812 388 aa12.92□□□□□ -0.34
LINC01006-202ENST00000418309 NAGAP17050 411 aa12.92□□□□□ -0.34
LINC01006-202ENST00000418309 KRT6CP48668 564 aa12.92□□□□□ -0.34
LINC01006-202ENST00000418309 ART1P52961 327 aa12.92□□□□□ -0.34
LINC01006-202ENST00000418309 CLCQ05315 142 aa12.92□□□□□ -0.34
LINC01006-202ENST00000418309 PLCXD2Q0VAA5 305 aa12.92□□□□□ -0.34
LINC01006-202ENST00000418309 MGAT2Q10469 447 aa12.92□□□□□ -0.34
LINC01006-202ENST00000418309 TRMT12Q53H54 448 aaKnown RBP12.92□□□□□ -0.34
LINC01006-202ENST00000418309 WIPI1Q5MNZ9 446 aaPredicted RBP12.92□□□□□ -0.34
LINC01006-202ENST00000418309 FNDC7Q5VTL7 733 aa12.92□□□□□ -0.34
LINC01006-202ENST00000418309 FAM219BQ5XKK7 198 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms