RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 HBQ1P09105 142 aa5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 TRIM49P0CI25 452 aa5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 TRIM49CP0CI26 452 aa5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 ATP6V1B1P15313 513 aa5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 CYP11B1P15538 503 aa5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 PIK3R1P27986 724 aa5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 HMGCLP35914 325 aa5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 KCNJ5P48544 419 aa5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 HSPA7P48741 367 aa5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 CCT3P49368 545 aaKnown RBP5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 PPM1FP49593 454 aaPredicted RBP5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 AQP4P55087 323 aa5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 CLRN1P58418 232 aa5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 GPX6P59796 221 aa5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 TOB2Q14106 344 aaPredicted RBP5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 ZNF169Q14929 603 aaPredicted RBP5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 PDK2Q15119 407 aa5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 SGCAQ16586 387 aa5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 PDK4Q16654 411 aa5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 MPEG1Q2M385 716 aa5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 SFT2D3Q587I9 215 aa5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 ZNF648Q5T619 568 aaPredicted RBP5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 UBAP2Q5T6F2 1119 aaKnown RBP5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 SLC9A4Q6AI14 798 aa5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 ZNF324BQ6AW86 544 aaPredicted RBP5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 PM20D1Q6GTS8 502 aa5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 C3orf33Q6P1S2 294 aa5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 SLC39A4Q6P5W5 647 aa5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 ALKBH5Q6P6C2 394 aaKnown RBP5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 RFWD3Q6PCD5 774 aa5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 CYP20A1Q6UW02 462 aa5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 ZNF783Q6ZMS7 281 aa5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 CREB3L2Q70SY1 520 aa5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 ENOSF1Q7L5Y1 443 aa5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 PRSS42Q7Z5A4 293 aa5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 SCD5Q86SK9 330 aa5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 CTAGE3PQ8IX95 158 aa5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 RASGEF1CQ8N431 466 aa5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 NKAPQ8N5F7 415 aaKnown RBP5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 ANKRD42Q8N9B4 389 aa5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 HJURPQ8NCD3 748 aaPredicted RBP5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 PSD4Q8NDX1 1056 aa5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 LPCAT1Q8NF37 534 aa5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 TSPAN14Q8NG11 270 aa5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 GOT1L1Q8NHS2 421 aaPredicted RBP5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 RAB2BQ8WUD1 216 aa5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 ASZ1Q8WWH4 475 aa5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 ASB12Q8WXK4 309 aa5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 POMGNT1Q8WZA1 660 aa5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 SHC3Q92529 594 aa5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 NR4A3Q92570 626 aa5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 PPP1R16AQ96I34 528 aa5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 NSL1Q96IY1 281 aa5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 MAGED4Q96JG8 741 aa5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 CMTM3Q96MX0 182 aa5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 SERPINB11Q96P15 392 aa5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 SMOQ99835 787 aa5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 ZNF251Q9BRH9 671 aa5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 FEM1AQ9BSK4 669 aa5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 CCM2Q9BSQ5 444 aa5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 YTHDF1Q9BYJ9 559 aaKnown RBP5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 FRMD8Q9BZ67 464 aaPredicted RBP5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 GPR61Q9BZJ8 451 aa5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 RPF2Q9H7B2 306 aaKnown RBP5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 UNKLQ9H9P5 680 aaKnown RBP5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 IFT46Q9NQC8 304 aa5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 RLIMQ9NVW2 624 aa5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 SMOXQ9NWM0 555 aa5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 HPF1Q9NWY4 346 aa5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 NKIRAS1Q9NYS0 192 aa5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 FAM30AQ9NZY2 134 aa5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 FETUBQ9UGM5 382 aa5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 BCAP29Q9UHQ4 241 aa5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 TRMT6Q9UJA5 497 aaKnown RBP5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 MAN1B1Q9UKM7 699 aa5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 ACSL5Q9ULC5 683 aa5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 GAB2Q9UQC2 676 aa5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 CSAG2Q9Y5P2 127 aa5.17□□□□□ -1.58
ECHDC1-206ENST00000417628 UNC13CQ8NB66 2214 aa5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 FAM237BA0A1B0GVD1 139 aa5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 A0A1W2PRX2 142 aa5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 IGLON5A6NGN9 336 aa5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 CENPXA8MT69 81 aa5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 B5MCH6 92 aa5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 H3BMQ9 156 aa5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 H3BNH8 94 aa5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 H3BSA7 217 aa5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 PGRMC1O00264 195 aaKnown RBP5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 CTDSP2O14595 271 aa5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 SLC19A2O60779 497 aa5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 BEST1O76090 585 aa5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 SOX30O94993 753 aa5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 NDST3O95803 873 aa5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 TNFP01375 233 aa5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 S100A8P05109 93 aa5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 APOA4P06727 396 aa5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 CTSLP07711 333 aa5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 TMEM191BP0C7N4 346 aa5.16□□□□□ -1.58
ECHDC1-206ENST00000417628 HSMCR30P0CW71 290 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms