RNA–Protein interactions for RNA: ENST00000414781.1

RAPGEF1-204, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-204ENST00000414781 MS4A8Q9BY19 250 aa12.56□□□□□ -0.4
RAPGEF1-204ENST00000414781 ACPTQ9BZG2 426 aa12.56□□□□□ -0.4
RAPGEF1-204ENST00000414781 REXO4Q9GZR2 422 aaKnown RBP12.56□□□□□ -0.4
RAPGEF1-204ENST00000414781 LRTM1Q9HBL6 345 aa12.56□□□□□ -0.4
RAPGEF1-204ENST00000414781 PLSCR2Q9NRY7 297 aa12.56□□□□□ -0.4
RAPGEF1-204ENST00000414781 EIF3LQ9Y262 564 aaKnown RBP12.56□□□□□ -0.4
RAPGEF1-204ENST00000414781 ARL2BPQ9Y2Y0 163 aa12.56□□□□□ -0.4
RAPGEF1-204ENST00000414781 ANK2Q01484 3957 aa12.55□□□□□ -0.4
RAPGEF1-204ENST00000414781 ZANQ9Y493 2812 aa12.55□□□□□ -0.4
RAPGEF1-204ENST00000414781 ATP6AP2A0A1C7CYW4 349 aa12.55□□□□□ -0.4
RAPGEF1-204ENST00000414781 SDHDO14521 159 aa12.55□□□□□ -0.4
RAPGEF1-204ENST00000414781 SMAD7O15105 426 aaKnown RBP12.55□□□□□ -0.4
RAPGEF1-204ENST00000414781 CCDC22O60826 627 aa12.55□□□□□ -0.4
RAPGEF1-204ENST00000414781 PEX11AO75192 247 aa12.55□□□□□ -0.4
RAPGEF1-204ENST00000414781 ATP6AP2O75787 350 aa12.55□□□□□ -0.4
RAPGEF1-204ENST00000414781 SEC24DO94855 1032 aaPredicted RBP12.55□□□□□ -0.4
RAPGEF1-204ENST00000414781 MED26O95402 600 aa12.55□□□□□ -0.4
RAPGEF1-204ENST00000414781 BMP7P18075 431 aa12.55□□□□□ -0.4
RAPGEF1-204ENST00000414781 CD53P19397 219 aa12.55□□□□□ -0.4
RAPGEF1-204ENST00000414781 EPHA3P29320 983 aa12.55□□□□□ -0.4
RAPGEF1-204ENST00000414781 HTR6P50406 440 aa12.55□□□□□ -0.4
RAPGEF1-204ENST00000414781 TAS2R50P59544 299 aa12.55□□□□□ -0.4
RAPGEF1-204ENST00000414781 HMGCS1Q01581 520 aa12.55□□□□□ -0.4
RAPGEF1-204ENST00000414781 EMX2Q04743 252 aa12.55□□□□□ -0.4
RAPGEF1-204ENST00000414781 ACSM2AQ08AH3 577 aa12.55□□□□□ -0.4
RAPGEF1-204ENST00000414781 ADPRMQ3LIE5 342 aa12.55□□□□□ -0.4
RAPGEF1-204ENST00000414781 SLC9B1Q4ZJI4 515 aa12.55□□□□□ -0.4
RAPGEF1-204ENST00000414781 C6orf136Q5SQH8 315 aa12.55□□□□□ -0.4
RAPGEF1-204ENST00000414781 ACSM2BQ68CK6 577 aa12.55□□□□□ -0.4
RAPGEF1-204ENST00000414781 OGFOD2Q6N063 350 aa12.55□□□□□ -0.4
RAPGEF1-204ENST00000414781 HMBOX1Q6NT76 420 aa12.55□□□□□ -0.4
RAPGEF1-204ENST00000414781 TRIM40Q6P9F5 258 aa12.55□□□□□ -0.4
RAPGEF1-204ENST00000414781 PAOXQ6QHF9 649 aa12.55□□□□□ -0.4
RAPGEF1-204ENST00000414781 PRSS57Q6UWY2 283 aa12.55□□□□□ -0.4
RAPGEF1-204ENST00000414781 LARP4Q71RC2 724 aaKnown RBP eCLIP12.55□□□□□ -0.4
RAPGEF1-204ENST00000414781 VN1R4Q7Z5H5 301 aa12.55□□□□□ -0.4
RAPGEF1-204ENST00000414781 CCDC197Q8NCU1 140 aa12.55□□□□□ -0.4
RAPGEF1-204ENST00000414781 OR2L5Q8NG80 312 aa12.55□□□□□ -0.4
RAPGEF1-204ENST00000414781 TMEM125Q96AQ2 219 aa12.55□□□□□ -0.4
RAPGEF1-204ENST00000414781 THOC1Q96FV9 657 aaKnown RBP12.55□□□□□ -0.4
RAPGEF1-204ENST00000414781 PPP1R36Q96LQ0 422 aa12.55□□□□□ -0.4
RAPGEF1-204ENST00000414781 C10orf90Q96M02 699 aa12.55□□□□□ -0.4
RAPGEF1-204ENST00000414781 KCNC2Q96PR1 638 aa12.55□□□□□ -0.4
RAPGEF1-204ENST00000414781 HBEGFQ99075 208 aa12.55□□□□□ -0.4
RAPGEF1-204ENST00000414781 TBCDQ9BTW9 1192 aa12.55□□□□□ -0.4
RAPGEF1-204ENST00000414781 WDR55Q9H6Y2 383 aaPredicted RBP12.55□□□□□ -0.4
RAPGEF1-204ENST00000414781 AKTIPQ9H8T0 292 aa12.55□□□□□ -0.4
RAPGEF1-204ENST00000414781 PLEKHF2Q9H8W4 249 aa12.55□□□□□ -0.4
RAPGEF1-204ENST00000414781 SIRT5Q9NXA8 310 aa12.55□□□□□ -0.4
RAPGEF1-204ENST00000414781 B4GALT7Q9UBV7 327 aa12.55□□□□□ -0.4
RAPGEF1-204ENST00000414781 ADAM29Q9UKF5 820 aa12.55□□□□□ -0.4
RAPGEF1-204ENST00000414781 RUVBL1Q9Y265 456 aaKnown RBP12.55□□□□□ -0.4
RAPGEF1-204ENST00000414781 WBP11Q9Y2W2 641 aaKnown RBP12.55□□□□□ -0.4
RAPGEF1-204ENST00000414781 KLF13Q9Y2Y9 288 aaPredicted RBP12.55□□□□□ -0.4
RAPGEF1-204ENST00000414781 CCL27Q9Y4X3 112 aa12.55□□□□□ -0.4
RAPGEF1-204ENST00000414781 SLC22A7Q9Y694 548 aa12.55□□□□□ -0.4
RAPGEF1-204ENST00000414781 LOC105369274A0A096LPK9 316 aa12.54□□□□□ -0.4
RAPGEF1-204ENST00000414781 LOC102723532A0A0G2JNH3 316 aa12.54□□□□□ -0.4
RAPGEF1-204ENST00000414781 FIGNL2A6NMB9 653 aa12.54□□□□□ -0.4
RAPGEF1-204ENST00000414781 SYT5O00445 386 aa12.54□□□□□ -0.4
RAPGEF1-204ENST00000414781 LSM1O15116 133 aaKnown RBP12.54□□□□□ -0.4
RAPGEF1-204ENST00000414781 UBDO15205 165 aa12.54□□□□□ -0.4
RAPGEF1-204ENST00000414781 WIPF1O43516 503 aa12.54□□□□□ -0.4
RAPGEF1-204ENST00000414781 ACVR2AP27037 513 aa12.54□□□□□ -0.4
RAPGEF1-204ENST00000414781 GSTM5P46439 218 aa12.54□□□□□ -0.4
RAPGEF1-204ENST00000414781 ERVK-8P63133 956 aa12.54□□□□□ -0.4
RAPGEF1-204ENST00000414781 HERC3Q15034 1050 aa12.54□□□□□ -0.4
RAPGEF1-204ENST00000414781 RPS6KA2Q15349 733 aa12.54□□□□□ -0.4
RAPGEF1-204ENST00000414781 CMPK2Q5EBM0 449 aa12.54□□□□□ -0.4
RAPGEF1-204ENST00000414781 EMC4Q5J8M3 183 aa12.54□□□□□ -0.4
RAPGEF1-204ENST00000414781 FRMPD2BQ6IN97 320 aa12.54□□□□□ -0.4
RAPGEF1-204ENST00000414781 CGB2Q6NT52 195 aa12.54□□□□□ -0.4
RAPGEF1-204ENST00000414781 B3GNT6Q6ZMB0 384 aa12.54□□□□□ -0.4
RAPGEF1-204ENST00000414781 MAVSQ7Z434 540 aa12.54□□□□□ -0.4
RAPGEF1-204ENST00000414781 VN1R5Q7Z5H4 357 aa12.54□□□□□ -0.4
RAPGEF1-204ENST00000414781 CPEB2Q7Z5Q1 589 aaKnown RBP12.54□□□□□ -0.4
RAPGEF1-204ENST00000414781 CXorf67Q86X51 503 aaPredicted RBP12.54□□□□□ -0.4
RAPGEF1-204ENST00000414781 OR4N4Q8N0Y3 316 aa12.54□□□□□ -0.4
RAPGEF1-204ENST00000414781 METTL4Q8N3J2 472 aa12.54□□□□□ -0.4
RAPGEF1-204ENST00000414781 FNDC5Q8NAU1 212 aa12.54□□□□□ -0.4
RAPGEF1-204ENST00000414781 M1APQ8TC57 530 aa12.54□□□□□ -0.4
RAPGEF1-204ENST00000414781 GAL3ST3Q96A11 431 aa12.54□□□□□ -0.4
RAPGEF1-204ENST00000414781 C3orf30Q96M34 536 aa12.54□□□□□ -0.4
RAPGEF1-204ENST00000414781 F2RL3Q96RI0 385 aa12.54□□□□□ -0.4
RAPGEF1-204ENST00000414781 NPAS2Q99743 824 aa12.54□□□□□ -0.4
RAPGEF1-204ENST00000414781 TTYH2Q9BSA4 534 aa12.54□□□□□ -0.4
RAPGEF1-204ENST00000414781 OR51B5Q9H339 312 aa12.54□□□□□ -0.4
RAPGEF1-204ENST00000414781 RABEP2Q9H5N1 569 aa12.54□□□□□ -0.4
RAPGEF1-204ENST00000414781 CLK4Q9HAZ1 481 aaKnown RBP12.54□□□□□ -0.4
RAPGEF1-204ENST00000414781 MMP25Q9NPA2 562 aa12.54□□□□□ -0.4
RAPGEF1-204ENST00000414781 NOP53Q9NZM5 478 aaKnown RBP12.54□□□□□ -0.4
RAPGEF1-204ENST00000414781 SONP18583 2426 aaKnown RBP12.54□□□□□ -0.4
RAPGEF1-204ENST00000414781 KLRC4-KLRK1H3BQV0 150 aa12.53□□□□□ -0.4
RAPGEF1-204ENST00000414781 HAX1O00165 279 aa12.53□□□□□ -0.4
RAPGEF1-204ENST00000414781 NRP2O60462 931 aa12.53□□□□□ -0.4
RAPGEF1-204ENST00000414781 GUCY1B2O75343 617 aa12.53□□□□□ -0.4
RAPGEF1-204ENST00000414781 DCTN3O75935 186 aa12.53□□□□□ -0.4
RAPGEF1-204ENST00000414781 JUNP05412 331 aaKnown RBP12.53□□□□□ -0.4
RAPGEF1-204ENST00000414781 PRPS2P11908 318 aa12.53□□□□□ -0.4
RAPGEF1-204ENST00000414781 IDO1P14902 403 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms