RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 H0YCG3 227 aa3.99□□□□□ -1.77
HMGB3P31-201ENST00000413333 H0YL77 283 aa3.99□□□□□ -1.77
HMGB3P31-201ENST00000413333 SGK494L7N484 410 aa3.99□□□□□ -1.77
HMGB3P31-201ENST00000413333 CYB561D2O14569 222 aa3.99□□□□□ -1.77
HMGB3P31-201ENST00000413333 GMFGO60234 142 aa3.99□□□□□ -1.77
HMGB3P31-201ENST00000413333 ZFAND5O76080 213 aa3.99□□□□□ -1.77
HMGB3P31-201ENST00000413333 OR9G9P0C7N8 305 aa3.99□□□□□ -1.77
HMGB3P31-201ENST00000413333 PRG2P13727 222 aa3.99□□□□□ -1.77
HMGB3P31-201ENST00000413333 ZNF10P21506 573 aaPredicted RBP3.99□□□□□ -1.77
HMGB3P31-201ENST00000413333 CALML3P27482 149 aa3.99□□□□□ -1.77
HMGB3P31-201ENST00000413333 PSMA5P28066 241 aa3.99□□□□□ -1.77
HMGB3P31-201ENST00000413333 ADSSP30520 456 aa3.99□□□□□ -1.77
HMGB3P31-201ENST00000413333 AXLP30530 894 aa3.99□□□□□ -1.77
HMGB3P31-201ENST00000413333 FKBP3Q00688 224 aaKnown RBP3.99□□□□□ -1.77
HMGB3P31-201ENST00000413333 CALCOCO2Q13137 446 aa3.99□□□□□ -1.77
HMGB3P31-201ENST00000413333 SNTB2Q13425 540 aaKnown RBP3.99□□□□□ -1.77
HMGB3P31-201ENST00000413333 FASTKQ14296 549 aaKnown RBP3.99□□□□□ -1.77
HMGB3P31-201ENST00000413333 NADK2Q4G0N4 442 aa3.99□□□□□ -1.77
HMGB3P31-201ENST00000413333 BEND6Q5SZJ8 279 aaPredicted RBP3.99□□□□□ -1.77
HMGB3P31-201ENST00000413333 RHBDD2Q6NTF9 364 aa3.99□□□□□ -1.77
HMGB3P31-201ENST00000413333 LRRC8BQ6P9F7 803 aa3.99□□□□□ -1.77
HMGB3P31-201ENST00000413333 PPP1R42Q7Z4L9 355 aa3.99□□□□□ -1.77
HMGB3P31-201ENST00000413333 RANBP3LQ86VV4 465 aaPredicted RBP3.99□□□□□ -1.77
HMGB3P31-201ENST00000413333 GRAMD2AQ8IUY3 354 aa3.99□□□□□ -1.77
HMGB3P31-201ENST00000413333 CCDC36Q8IYA8 594 aa3.99□□□□□ -1.77
HMGB3P31-201ENST00000413333 ZNF614Q8N883 585 aa3.99□□□□□ -1.77
HMGB3P31-201ENST00000413333 FADS6Q8N9I5 356 aa3.99□□□□□ -1.77
HMGB3P31-201ENST00000413333 OR4F17Q8NGA8 305 aa3.99□□□□□ -1.77
HMGB3P31-201ENST00000413333 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.99□□□□□ -1.77
HMGB3P31-201ENST00000413333 RBM18Q96H35 190 aaKnown RBP3.99□□□□□ -1.77
HMGB3P31-201ENST00000413333 NSMCE3Q96MG7 304 aa3.99□□□□□ -1.77
HMGB3P31-201ENST00000413333 VSTM2LQ96N03 204 aa3.99□□□□□ -1.77
HMGB3P31-201ENST00000413333 TTC25Q96NG3 672 aa3.99□□□□□ -1.77
HMGB3P31-201ENST00000413333 OR4F4Q96R69 305 aa3.99□□□□□ -1.77
HMGB3P31-201ENST00000413333 TSPAN18Q96SJ8 248 aa3.99□□□□□ -1.77
HMGB3P31-201ENST00000413333 LGMNQ99538 433 aa3.99□□□□□ -1.77
HMGB3P31-201ENST00000413333 SP140LQ9H930 580 aa3.99□□□□□ -1.77
HMGB3P31-201ENST00000413333 Q9HAA7 133 aa3.99□□□□□ -1.77
HMGB3P31-201ENST00000413333 TRPV5Q9NQA5 729 aa3.99□□□□□ -1.77
HMGB3P31-201ENST00000413333 DEPPQ9NTK1 212 aa3.99□□□□□ -1.77
HMGB3P31-201ENST00000413333 NDE1Q9NXR1 346 aa3.99□□□□□ -1.77
HMGB3P31-201ENST00000413333 GPR83Q9NYM4 423 aa3.99□□□□□ -1.77
HMGB3P31-201ENST00000413333 RDH8Q9NYR8 311 aa3.99□□□□□ -1.77
HMGB3P31-201ENST00000413333 CHRNA9Q9UGM1 479 aa3.99□□□□□ -1.77
HMGB3P31-201ENST00000413333 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.99□□□□□ -1.77
HMGB3P31-201ENST00000413333 TCF20Q9UGU0 1960 aaKnown RBP3.99□□□□□ -1.77
HMGB3P31-201ENST00000413333 A0A087WYN8 130 aa3.98□□□□□ -1.77
HMGB3P31-201ENST00000413333 TRGV8A0A0C4DH27 118 aa3.98□□□□□ -1.77
HMGB3P31-201ENST00000413333 RNF222A6NCQ9 220 aa3.98□□□□□ -1.77
HMGB3P31-201ENST00000413333 WASH3PC4AMC7 463 aa3.98□□□□□ -1.77
HMGB3P31-201ENST00000413333 H3BTX0 84 aa3.98□□□□□ -1.77
HMGB3P31-201ENST00000413333 PDHXO00330 501 aa3.98□□□□□ -1.77
HMGB3P31-201ENST00000413333 E2F3O00716 465 aa3.98□□□□□ -1.77
HMGB3P31-201ENST00000413333 SDHDO14521 159 aa3.98□□□□□ -1.77
HMGB3P31-201ENST00000413333 TRAFD1O14545 582 aaPredicted RBP3.98□□□□□ -1.77
HMGB3P31-201ENST00000413333 ANGPT2O15123 496 aa3.98□□□□□ -1.77
HMGB3P31-201ENST00000413333 RANBP6O60518 1105 aaKnown RBP3.98□□□□□ -1.77
HMGB3P31-201ENST00000413333 NDUFA7O95182 113 aa3.98□□□□□ -1.77
HMGB3P31-201ENST00000413333 ECDO95905 644 aaPredicted RBP3.98□□□□□ -1.77
HMGB3P31-201ENST00000413333 OAS1P00973 400 aaKnown RBP3.98□□□□□ -1.77
HMGB3P31-201ENST00000413333 ASNSP08243 561 aa3.98□□□□□ -1.77
HMGB3P31-201ENST00000413333 THRBP10828 461 aa3.98□□□□□ -1.77
HMGB3P31-201ENST00000413333 ATP6V1C1P21283 382 aa3.98□□□□□ -1.77
HMGB3P31-201ENST00000413333 HNRNPA2B1P22626 353 aaKnown RBP3.98□□□□□ -1.77
HMGB3P31-201ENST00000413333 UCP1P25874 307 aa3.98□□□□□ -1.77
HMGB3P31-201ENST00000413333 NDUFV3P56181 108 aaKnown RBP3.98□□□□□ -1.77
HMGB3P31-201ENST00000413333 KRTAP10-11P60412 298 aa3.98□□□□□ -1.77
HMGB3P31-201ENST00000413333 PPIAP62937 165 aaKnown RBP3.98□□□□□ -1.77
HMGB3P31-201ENST00000413333 KRTAP1-1Q07627 177 aa3.98□□□□□ -1.77
HMGB3P31-201ENST00000413333 FASTKD3Q14CZ7 662 aaKnown RBP3.98□□□□□ -1.77
HMGB3P31-201ENST00000413333 CCDC57Q2TAC2 916 aa3.98□□□□□ -1.77
HMGB3P31-201ENST00000413333 KRTAP24-1Q3LI83 254 aa3.98□□□□□ -1.77
HMGB3P31-201ENST00000413333 MUC21Q5SSG8 566 aa3.98□□□□□ -1.77
HMGB3P31-201ENST00000413333 AGAP7PQ5VUJ5 663 aa3.98□□□□□ -1.77
HMGB3P31-201ENST00000413333 NCR3LG1Q68D85 454 aa3.98□□□□□ -1.77
HMGB3P31-201ENST00000413333 ASPHD2Q6ICH7 369 aa3.98□□□□□ -1.77
HMGB3P31-201ENST00000413333 WASH2PQ6VEQ5 465 aa3.98□□□□□ -1.77
HMGB3P31-201ENST00000413333 PAQR9Q6ZVX9 377 aa3.98□□□□□ -1.77
HMGB3P31-201ENST00000413333 Q7L0L9 218 aa3.98□□□□□ -1.77
HMGB3P31-201ENST00000413333 LHFPL4Q7Z7J7 247 aa3.98□□□□□ -1.77
HMGB3P31-201ENST00000413333 LRRTM1Q86UE6 522 aa3.98□□□□□ -1.77
HMGB3P31-201ENST00000413333 ZFAND4Q86XD8 727 aa3.98□□□□□ -1.77
HMGB3P31-201ENST00000413333 ZNF781Q8N8C0 355 aa3.98□□□□□ -1.77
HMGB3P31-201ENST00000413333 SAMD12Q8N8I0 201 aa3.98□□□□□ -1.77
HMGB3P31-201ENST00000413333 OR52J3Q8NH60 311 aa3.98□□□□□ -1.77
HMGB3P31-201ENST00000413333 LHX4Q969G2 390 aa3.98□□□□□ -1.77
HMGB3P31-201ENST00000413333 RAB3CQ96E17 227 aa3.98□□□□□ -1.77
HMGB3P31-201ENST00000413333 VPS35Q96QK1 796 aa3.98□□□□□ -1.77
HMGB3P31-201ENST00000413333 CPXM1Q96SM3 734 aa3.98□□□□□ -1.77
HMGB3P31-201ENST00000413333 TXN2Q99757 166 aa3.98□□□□□ -1.77
HMGB3P31-201ENST00000413333 GPA33Q99795 319 aa3.98□□□□□ -1.77
HMGB3P31-201ENST00000413333 RBM4Q9BWF3 364 aaKnown RBP3.98□□□□□ -1.77
HMGB3P31-201ENST00000413333 RBM24Q9BX46 236 aaKnown RBP3.98□□□□□ -1.77
HMGB3P31-201ENST00000413333 MRPL13Q9BYD1 178 aaKnown RBP3.98□□□□□ -1.77
HMGB3P31-201ENST00000413333 GSDMCQ9BYG8 508 aa3.98□□□□□ -1.77
HMGB3P31-201ENST00000413333 TMEM117Q9H0C3 514 aa3.98□□□□□ -1.77
HMGB3P31-201ENST00000413333 IL1RL2Q9HB29 575 aa3.98□□□□□ -1.77
HMGB3P31-201ENST00000413333 ELL3Q9HB65 397 aaPredicted RBP3.98□□□□□ -1.77
HMGB3P31-201ENST00000413333 FAM114A2Q9NRY5 505 aa3.98□□□□□ -1.77
HMGB3P31-201ENST00000413333 STARD5Q9NSY2 213 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms