RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 KANSL1Q7Z3B3 1105 aa4.97□□□□□ -1.61
HERC4-205ENST00000412272 C5orf24Q7Z6I8 188 aa4.97□□□□□ -1.61
HERC4-205ENST00000412272 FAM160A2Q8N612 972 aaPredicted RBP4.97□□□□□ -1.61
HERC4-205ENST00000412272 OR52E4Q8NGH9 312 aa4.97□□□□□ -1.61
HERC4-205ENST00000412272 OR52M1Q8NGK5 317 aa4.97□□□□□ -1.61
HERC4-205ENST00000412272 OR4Q3Q8NH05 313 aa4.97□□□□□ -1.61
HERC4-205ENST00000412272 OR5K1Q8NHB7 308 aa4.97□□□□□ -1.61
HERC4-205ENST00000412272 ATP6V0BQ99437 205 aa4.97□□□□□ -1.61
HERC4-205ENST00000412272 HAPLN2Q9GZV7 340 aa4.97□□□□□ -1.61
HERC4-205ENST00000412272 ENKD1Q9H0I2 346 aa4.97□□□□□ -1.61
HERC4-205ENST00000412272 PRO1933Q9H354 126 aa4.97□□□□□ -1.61
HERC4-205ENST00000412272 MEAF6Q9HAF1 191 aa4.97□□□□□ -1.61
HERC4-205ENST00000412272 ACSS1Q9NUB1 689 aaPredicted RBP4.97□□□□□ -1.61
HERC4-205ENST00000412272 FBXO34Q9NWN3 711 aa4.97□□□□□ -1.61
HERC4-205ENST00000412272 RCC2Q9P258 522 aaKnown RBP4.97□□□□□ -1.61
HERC4-205ENST00000412272 TBC1D29Q9UFV1 150 aa4.97□□□□□ -1.61
HERC4-205ENST00000412272 TCFL5Q9UL49 500 aa4.97□□□□□ -1.61
HERC4-205ENST00000412272 MICAL3Q7RTP6 2002 aa4.96□□□□□ -1.61
HERC4-205ENST00000412272 A0A0A6YYC8 382 aaPredicted RBP4.96□□□□□ -1.61
HERC4-205ENST00000412272 ARHGEF33A8MVX0 844 aa4.96□□□□□ -1.61
HERC4-205ENST00000412272 CDRT15L2A8MXV6 281 aa4.96□□□□□ -1.61
HERC4-205ENST00000412272 I3L1I5 382 aaPredicted RBP4.96□□□□□ -1.61
HERC4-205ENST00000412272 APOC4-APOC2K7ER74 178 aa4.96□□□□□ -1.61
HERC4-205ENST00000412272 GJB3O75712 270 aa4.96□□□□□ -1.61
HERC4-205ENST00000412272 KDM4BO94953 1096 aa4.96□□□□□ -1.61
HERC4-205ENST00000412272 APOC2P02655 101 aa4.96□□□□□ -1.61
HERC4-205ENST00000412272 RPLP2P05387 115 aaKnown RBP4.96□□□□□ -1.61
HERC4-205ENST00000412272 ADH1AP07327 375 aa4.96□□□□□ -1.61
HERC4-205ENST00000412272 PHKG2P15735 406 aa4.96□□□□□ -1.61
HERC4-205ENST00000412272 LAG3P18627 525 aa4.96□□□□□ -1.61
HERC4-205ENST00000412272 POU3F2P20265 443 aaPredicted RBP4.96□□□□□ -1.61
HERC4-205ENST00000412272 LIMS1P48059 325 aa4.96□□□□□ -1.61
HERC4-205ENST00000412272 UBE2G2P60604 165 aa4.96□□□□□ -1.61
HERC4-205ENST00000412272 RPS7P62081 194 aaKnown RBP4.96□□□□□ -1.61
HERC4-205ENST00000412272 NHLH1Q02575 133 aa4.96□□□□□ -1.61
HERC4-205ENST00000412272 IFRD2Q12894 506 aaPredicted RBP4.96□□□□□ -1.61
HERC4-205ENST00000412272 KRT33BQ14525 404 aa4.96□□□□□ -1.61
HERC4-205ENST00000412272 IMPG1Q17R60 797 aa4.96□□□□□ -1.61
HERC4-205ENST00000412272 UGT3A2Q3SY77 523 aa4.96□□□□□ -1.61
HERC4-205ENST00000412272 SAXO2Q658L1 398 aa4.96□□□□□ -1.61
HERC4-205ENST00000412272 GLYATQ6IB77 296 aa4.96□□□□□ -1.61
HERC4-205ENST00000412272 FAHD2BQ6P2I3 314 aaPredicted RBP4.96□□□□□ -1.61
HERC4-205ENST00000412272 B3GNT9Q6UX72 402 aa4.96□□□□□ -1.61
HERC4-205ENST00000412272 NDUFAF7Q7L592 441 aa4.96□□□□□ -1.61
HERC4-205ENST00000412272 P4HA3Q7Z4N8 544 aa4.96□□□□□ -1.61
HERC4-205ENST00000412272 GLCCI1Q86VQ1 547 aa4.96□□□□□ -1.61
HERC4-205ENST00000412272 AMER2Q8N7J2 671 aa4.96□□□□□ -1.61
HERC4-205ENST00000412272 OR2V1Q8NHB1 315 aa4.96□□□□□ -1.61
HERC4-205ENST00000412272 FEZF2Q8TBJ5 459 aa4.96□□□□□ -1.61
HERC4-205ENST00000412272 SMPDL3AQ92484 453 aa4.96□□□□□ -1.61
HERC4-205ENST00000412272 TADA1Q96BN2 335 aa4.96□□□□□ -1.61
HERC4-205ENST00000412272 FAHD2AQ96GK7 314 aa4.96□□□□□ -1.61
HERC4-205ENST00000412272 EGFL8Q99944 293 aa4.96□□□□□ -1.61
HERC4-205ENST00000412272 MGME1Q9BQP7 344 aa4.96□□□□□ -1.61
HERC4-205ENST00000412272 H2AFJQ9BTM1 129 aa4.96□□□□□ -1.61
HERC4-205ENST00000412272 ZNF408Q9H9D4 720 aa4.96□□□□□ -1.61
HERC4-205ENST00000412272 EMC7Q9NPA0 242 aa4.96□□□□□ -1.61
HERC4-205ENST00000412272 RXFP3Q9NSD7 469 aa4.96□□□□□ -1.61
HERC4-205ENST00000412272 SLC35D1Q9NTN3 355 aa4.96□□□□□ -1.61
HERC4-205ENST00000412272 FAM118AQ9NWS6 357 aa4.96□□□□□ -1.61
HERC4-205ENST00000412272 MTMR10Q9NXD2 777 aa4.96□□□□□ -1.61
HERC4-205ENST00000412272 MAGEL2Q9UJ55 1249 aa4.96□□□□□ -1.61
HERC4-205ENST00000412272 AURKCQ9UQB9 309 aa4.96□□□□□ -1.61
HERC4-205ENST00000412272 COL11A2P13942 1736 aaPredicted RBP4.96□□□□□ -1.61
HERC4-205ENST00000412272 SNED1Q8TER0 1413 aa4.96□□□□□ -1.61
HERC4-205ENST00000412272 RNF103-CHMP3A0A140T963 221 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 TCRBV21S2A2A0A5A6 115 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 TP53I11O14683 189 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 CFLARO15519 480 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 NBEAP1P0C6P0 100 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 FOSL2P15408 326 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 NPR2P20594 1047 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 VAMP7P51809 220 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 EPHA4P54764 986 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 CLDN20P56880 219 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 SHC2P98077 582 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 ELP6Q0PNE2 266 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 PRAMEF14Q5SWL7 426 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 TMIGD1Q6UXZ0 262 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 KMT5CQ86Y97 462 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 UXS1Q8NBZ7 420 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 DUSP18Q8NEJ0 188 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 LKAAEAR1Q8TD35 194 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 RORBQ92753 470 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 SLC38A4Q969I6 547 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 UPRTQ96BW1 309 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 CMTM7Q96FZ5 175 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 MRGPRX1Q96LB2 322 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 C7orf50Q9BRJ6 194 aaKnown RBP4.96□□□□□ -1.62
HERC4-205ENST00000412272 MFFQ9GZY8 342 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 PTGES2Q9H7Z7 377 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 ABCB9Q9NP78 766 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 SPHK2Q9NRA0 654 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 PAK5Q9P286 719 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 SEPT9Q9UHD8 586 aaPredicted RBP4.96□□□□□ -1.62
HERC4-205ENST00000412272 TBX20Q9UMR3 447 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 YLPM1P49750 1951 aaKnown RBP4.96□□□□□ -1.62
HERC4-205ENST00000412272 M0R233 179 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 TRIM13O60858 407 aa4.96□□□□□ -1.62
HERC4-205ENST00000412272 NDUFS3O75489 264 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms