RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 SLC10A1Q14973 349 aa10.73□□□□□ -0.69
PRPF40A-202ENST00000410080 PLEKHN1Q494U1 663 aaPredicted RBP10.73□□□□□ -0.69
PRPF40A-202ENST00000410080 FCRLBQ6BAA4 426 aa10.73□□□□□ -0.69
PRPF40A-202ENST00000410080 WDSUB1Q8N9V3 476 aa10.73□□□□□ -0.69
PRPF40A-202ENST00000410080 URM1Q9BTM9 101 aaKnown RBP10.73□□□□□ -0.69
PRPF40A-202ENST00000410080 TPT1P8Q9HAU6 139 aa10.73□□□□□ -0.69
PRPF40A-202ENST00000410080 TAS2R3Q9NYW6 316 aa10.73□□□□□ -0.69
PRPF40A-202ENST00000410080 IFNA4P05014 189 aa10.73□□□□□ -0.69
PRPF40A-202ENST00000410080 CX3CR1P49238 355 aa10.73□□□□□ -0.69
PRPF40A-202ENST00000410080 SHC2P98077 582 aa10.73□□□□□ -0.69
PRPF40A-202ENST00000410080 SSX2Q16385 188 aa10.73□□□□□ -0.69
PRPF40A-202ENST00000410080 SLC36A3Q495N2 470 aa10.73□□□□□ -0.69
PRPF40A-202ENST00000410080 CYBRD1Q53TN4 286 aa10.73□□□□□ -0.69
PRPF40A-202ENST00000410080 TMEM71Q6P5X7 295 aa10.73□□□□□ -0.69
PRPF40A-202ENST00000410080 KCTD18Q6PI47 426 aaPredicted RBP10.73□□□□□ -0.69
PRPF40A-202ENST00000410080 FAM46AQ96IP4 442 aaKnown RBP10.73□□□□□ -0.69
PRPF40A-202ENST00000410080 UHRF1Q96T88 793 aaPredicted RBP10.73□□□□□ -0.69
PRPF40A-202ENST00000410080 KCMF1Q9P0J7 381 aa10.73□□□□□ -0.69
PRPF40A-202ENST00000410080 CNOT11Q9UKZ1 510 aaKnown RBP10.73□□□□□ -0.69
PRPF40A-202ENST00000410080 NFKBIEO00221 500 aa10.73□□□□□ -0.69
PRPF40A-202ENST00000410080 PIP5K1CO60331 668 aa10.73□□□□□ -0.69
PRPF40A-202ENST00000410080 CRTAPO75718 401 aaPredicted RBP10.73□□□□□ -0.69
PRPF40A-202ENST00000410080 ARL6IP5O75915 188 aa10.73□□□□□ -0.69
PRPF40A-202ENST00000410080 PGCP20142 388 aa10.73□□□□□ -0.69
PRPF40A-202ENST00000410080 MSR1P21757 451 aa10.73□□□□□ -0.69
PRPF40A-202ENST00000410080 RPP30P78346 268 aaKnown RBP10.73□□□□□ -0.69
PRPF40A-202ENST00000410080 NKPD1Q17RQ9 610 aa10.73□□□□□ -0.69
PRPF40A-202ENST00000410080 LEG1Q6P5S2 330 aa10.73□□□□□ -0.69
PRPF40A-202ENST00000410080 GID4Q8IVV7 300 aa10.73□□□□□ -0.69
PRPF40A-202ENST00000410080 NPAS3Q8IXF0 933 aa10.73□□□□□ -0.69
PRPF40A-202ENST00000410080 RNF175Q8N4F7 328 aa10.73□□□□□ -0.69
PRPF40A-202ENST00000410080 OR9A4Q8NGU2 314 aa10.73□□□□□ -0.69
PRPF40A-202ENST00000410080 SUN5Q8TC36 379 aa10.73□□□□□ -0.69
PRPF40A-202ENST00000410080 RSC1A1Q92681 617 aa10.73□□□□□ -0.69
PRPF40A-202ENST00000410080 NGBQ9NPG2 151 aa10.73□□□□□ -0.69
PRPF40A-202ENST00000410080 SLC39A1Q9NY26 324 aa10.73□□□□□ -0.69
PRPF40A-202ENST00000410080 ANKRD30BLA7E2S9 258 aa10.73□□□□□ -0.69
PRPF40A-202ENST00000410080 PTCHD3Q3KNS1 767 aa10.73□□□□□ -0.69
PRPF40A-202ENST00000410080 SLC18B1Q6NT16 456 aa10.73□□□□□ -0.69
PRPF40A-202ENST00000410080 ADAMTS10Q9H324 1103 aa10.73□□□□□ -0.69
PRPF40A-202ENST00000410080 SOX17Q9H6I2 414 aaPredicted RBP10.73□□□□□ -0.69
PRPF40A-202ENST00000410080 KCNK12Q9HB15 430 aa10.73□□□□□ -0.69
PRPF40A-202ENST00000410080 FNIP2Q9P278 1114 aa10.73□□□□□ -0.69
PRPF40A-202ENST00000410080 DNAJB4Q9UDY4 337 aa10.73□□□□□ -0.69
PRPF40A-202ENST00000410080 UNC119BA6NIH7 251 aa10.72□□□□□ -0.69
PRPF40A-202ENST00000410080 PIK3CBP42338 1070 aa10.72□□□□□ -0.69
PRPF40A-202ENST00000410080 TAP2Q03519 686 aa10.72□□□□□ -0.69
PRPF40A-202ENST00000410080 PAN3Q58A45 887 aaKnown RBP10.72□□□□□ -0.69
PRPF40A-202ENST00000410080 PLCXD3Q63HM9 321 aa10.72□□□□□ -0.69
PRPF40A-202ENST00000410080 ZNF765Q7L2R6 523 aa10.72□□□□□ -0.69
PRPF40A-202ENST00000410080 LINC00471Q8N535 108 aa10.72□□□□□ -0.69
PRPF40A-202ENST00000410080 TAMM41Q96BW9 452 aa10.72□□□□□ -0.69
PRPF40A-202ENST00000410080 MALSU1Q96EH3 234 aa10.72□□□□□ -0.69
PRPF40A-202ENST00000410080 RPF2Q9H7B2 306 aaKnown RBP10.72□□□□□ -0.69
PRPF40A-202ENST00000410080 SALL4Q9UJQ4 1053 aa10.72□□□□□ -0.69
PRPF40A-202ENST00000410080 M0QX08 132 aa10.72□□□□□ -0.69
PRPF40A-202ENST00000410080 EI24O14681 340 aa10.72□□□□□ -0.69
PRPF40A-202ENST00000410080 IFNA1P01562 189 aa10.72□□□□□ -0.69
PRPF40A-202ENST00000410080 ANXA8P13928 327 aa10.72□□□□□ -0.69
PRPF40A-202ENST00000410080 F8A1P23610 371 aa10.72□□□□□ -0.69
PRPF40A-202ENST00000410080 NTSR1P30989 418 aa10.72□□□□□ -0.69
PRPF40A-202ENST00000410080 LMAN2Q12907 356 aa10.72□□□□□ -0.69
PRPF40A-202ENST00000410080 ZNF517Q6ZMY9 492 aaPredicted RBP10.72□□□□□ -0.69
PRPF40A-202ENST00000410080 GRPEL2Q8TAA5 225 aa10.72□□□□□ -0.69
PRPF40A-202ENST00000410080 ZNF431Q8TF32 576 aaPredicted RBP10.72□□□□□ -0.69
PRPF40A-202ENST00000410080 ZNF599Q96NL3 588 aa10.72□□□□□ -0.69
PRPF40A-202ENST00000410080 OAZ3Q9UMX2 235 aa10.72□□□□□ -0.69
PRPF40A-202ENST00000410080 MYO7AQ13402 2215 aa10.72□□□□□ -0.69
PRPF40A-202ENST00000410080 TMEM233B4DJY2 109 aa10.72□□□□□ -0.69
PRPF40A-202ENST00000410080 POLR1CO15160 346 aaPredicted RBP10.72□□□□□ -0.69
PRPF40A-202ENST00000410080 MT-CO2P00403 227 aa10.72□□□□□ -0.69
PRPF40A-202ENST00000410080 F10P00742 488 aa10.72□□□□□ -0.69
PRPF40A-202ENST00000410080 CHRM4P08173 479 aa10.72□□□□□ -0.69
PRPF40A-202ENST00000410080 IMPDH1P20839 514 aa10.72□□□□□ -0.69
PRPF40A-202ENST00000410080 PTAFRP25105 342 aa10.72□□□□□ -0.69
PRPF40A-202ENST00000410080 GRIA1P42261 906 aa10.72□□□□□ -0.69
PRPF40A-202ENST00000410080 TAS2R43P59537 309 aa10.72□□□□□ -0.69
PRPF40A-202ENST00000410080 SQSTM1Q13501 440 aa10.72□□□□□ -0.69
PRPF40A-202ENST00000410080 EID2Q8N6I1 236 aa10.72□□□□□ -0.69
PRPF40A-202ENST00000410080 HSH2DQ96JZ2 352 aa10.72□□□□□ -0.69
PRPF40A-202ENST00000410080 A8MV72 311 aaPredicted RBP10.72□□□□□ -0.69
PRPF40A-202ENST00000410080 H7C1Q1 480 aa10.72□□□□□ -0.69
PRPF40A-202ENST00000410080 GABRDO14764 452 aa10.72□□□□□ -0.69
PRPF40A-202ENST00000410080 TIMM8AO60220 97 aaPredicted RBP10.72□□□□□ -0.69
PRPF40A-202ENST00000410080 GKN3PP0CG01 181 aa10.72□□□□□ -0.69
PRPF40A-202ENST00000410080 BMP1P13497 986 aa10.72□□□□□ -0.69
PRPF40A-202ENST00000410080 REEP3Q6NUK4 255 aa10.72□□□□□ -0.69
PRPF40A-202ENST00000410080 ZNF695Q8IW36 515 aa10.72□□□□□ -0.69
PRPF40A-202ENST00000410080 OR2T33Q8NG76 320 aa10.72□□□□□ -0.69
PRPF40A-202ENST00000410080 H1FXQ92522 213 aaKnown RBP10.72□□□□□ -0.69
PRPF40A-202ENST00000410080 FRZBQ92765 325 aa10.72□□□□□ -0.69
PRPF40A-202ENST00000410080 FBXW5Q969U6 566 aa10.72□□□□□ -0.69
PRPF40A-202ENST00000410080 NECTIN4Q96NY8 510 aa10.72□□□□□ -0.69
PRPF40A-202ENST00000410080 GALPQ9UBC7 116 aa10.72□□□□□ -0.69
PRPF40A-202ENST00000410080 KIAA0100Q14667 2235 aaKnown RBP10.72□□□□□ -0.69
PRPF40A-202ENST00000410080 BTBD17A6NE02 478 aa10.72□□□□□ -0.69
PRPF40A-202ENST00000410080 OR5K4A6NMS3 321 aa10.72□□□□□ -0.69
PRPF40A-202ENST00000410080 H3BNX3 289 aa10.72□□□□□ -0.69
PRPF40A-202ENST00000410080 FLRT2O43155 660 aa10.72□□□□□ -0.69
PRPF40A-202ENST00000410080 VIPR2P41587 438 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms