RNA–Protein interactions for RNA: ENST00000410038.5

LIMS2-209, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2 BASIC

Gene LIMS2, Length 1,695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-209ENST00000410038 MAGED4Q96JG8 741 aa13.34□□□□□ -0.27
LIMS2-209ENST00000410038 CCDC115Q96NT0 180 aa13.34□□□□□ -0.27
LIMS2-209ENST00000410038 OR10A5Q9H207 317 aa13.34□□□□□ -0.27
LIMS2-209ENST00000410038 PRORYQ9H606 182 aa13.34□□□□□ -0.27
LIMS2-209ENST00000410038 CXorf36Q9H7Y0 433 aa13.34□□□□□ -0.27
LIMS2-209ENST00000410038 NEUROD4Q9HD90 331 aa13.34□□□□□ -0.27
LIMS2-209ENST00000410038 SERHLQ9NQF3 203 aa13.34□□□□□ -0.27
LIMS2-209ENST00000410038 PTGFRNQ9P2B2 879 aa13.34□□□□□ -0.27
LIMS2-209ENST00000410038 PCDHGB4Q9UN71 923 aa13.34□□□□□ -0.27
LIMS2-209ENST00000410038 CAPN7Q9Y6W3 813 aa13.34□□□□□ -0.27
LIMS2-209ENST00000410038 A6NL46 340 aa13.34□□□□□ -0.27
LIMS2-209ENST00000410038 UPK1AO00322 258 aa13.34□□□□□ -0.27
LIMS2-209ENST00000410038 SLC22A2O15244 555 aa13.34□□□□□ -0.27
LIMS2-209ENST00000410038 PRKNO60260 465 aaPredicted RBP13.34□□□□□ -0.27
LIMS2-209ENST00000410038 CCL11P51671 97 aa13.34□□□□□ -0.27
LIMS2-209ENST00000410038 AP2B1P63010 937 aa13.34□□□□□ -0.27
LIMS2-209ENST00000410038 LRRC74AQ0VAA2 488 aa13.34□□□□□ -0.27
LIMS2-209ENST00000410038 C19orf57Q0VDD7 668 aa13.34□□□□□ -0.27
LIMS2-209ENST00000410038 TLR1Q15399 786 aa13.34□□□□□ -0.27
LIMS2-209ENST00000410038 TBR1Q16650 682 aa13.34□□□□□ -0.27
LIMS2-209ENST00000410038 BORAQ6PGQ7 559 aa13.34□□□□□ -0.27
LIMS2-209ENST00000410038 HSDL2Q6YN16 418 aa13.34□□□□□ -0.27
LIMS2-209ENST00000410038 C9orf40Q8IXQ3 194 aa13.34□□□□□ -0.27
LIMS2-209ENST00000410038 OR2L13Q8N349 312 aa13.34□□□□□ -0.27
LIMS2-209ENST00000410038 CCDC197Q8NCU1 140 aa13.34□□□□□ -0.27
LIMS2-209ENST00000410038 OR52R1Q8NGF1 315 aa13.34□□□□□ -0.27
LIMS2-209ENST00000410038 OR4A15Q8NGL6 344 aa13.34□□□□□ -0.27
LIMS2-209ENST00000410038 TSPEARQ8WU66 669 aa13.34□□□□□ -0.27
LIMS2-209ENST00000410038 INPP5KQ9BT40 448 aa13.34□□□□□ -0.27
LIMS2-209ENST00000410038 CCDC106Q9BWC9 280 aa13.34□□□□□ -0.27
LIMS2-209ENST00000410038 LHPPQ9H008 270 aa13.34□□□□□ -0.27
LIMS2-209ENST00000410038 DDX18Q9NVP1 670 aaKnown RBP13.34□□□□□ -0.27
LIMS2-209ENST00000410038 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.34□□□□□ -0.27
LIMS2-209ENST00000410038 BCAP29Q9UHQ4 241 aa13.34□□□□□ -0.27
LIMS2-209ENST00000410038 C19orf53Q9UNZ5 99 aaPredicted RBP13.34□□□□□ -0.27
LIMS2-209ENST00000410038 TNRC6AQ8NDV7 1962 aaKnown RBP13.33□□□□□ -0.28
LIMS2-209ENST00000410038 A0A1W2PP18 115 aa13.33□□□□□ -0.28
LIMS2-209ENST00000410038 DYTNA2CJ06 578 aa13.33□□□□□ -0.28
LIMS2-209ENST00000410038 ATXN7O15265 892 aaPredicted RBP13.33□□□□□ -0.28
LIMS2-209ENST00000410038 PRAMEF2O60811 474 aa13.33□□□□□ -0.28
LIMS2-209ENST00000410038 NME6O75414 186 aaPredicted RBP13.33□□□□□ -0.28
LIMS2-209ENST00000410038 BCAS2O75934 225 aaPredicted RBP13.33□□□□□ -0.28
LIMS2-209ENST00000410038 DCTN3O75935 186 aa13.33□□□□□ -0.28
LIMS2-209ENST00000410038 SNRPB2P08579 225 aaKnown RBP13.33□□□□□ -0.28
LIMS2-209ENST00000410038 CDKN2CP42773 168 aa13.33□□□□□ -0.28
LIMS2-209ENST00000410038 EMDP50402 254 aa13.33□□□□□ -0.28
LIMS2-209ENST00000410038 RNF4P78317 190 aa13.33□□□□□ -0.28
LIMS2-209ENST00000410038 H3F3CQ6NXT2 135 aa13.33□□□□□ -0.28
LIMS2-209ENST00000410038 JMJD6Q6NYC1 403 aaPredicted RBP13.33□□□□□ -0.28
LIMS2-209ENST00000410038 SLC2A7Q6PXP3 512 aa13.33□□□□□ -0.28
LIMS2-209ENST00000410038 GPR155Q7Z3F1 870 aa13.33□□□□□ -0.28
LIMS2-209ENST00000410038 OR8K3Q8NH51 312 aa13.33□□□□□ -0.28
LIMS2-209ENST00000410038 GOT1L1Q8NHS2 421 aaPredicted RBP13.33□□□□□ -0.28
LIMS2-209ENST00000410038 C16orf52Q8NHV5 167 aa13.33□□□□□ -0.28
LIMS2-209ENST00000410038 BRIX1Q8TDN6 353 aaKnown RBP13.33□□□□□ -0.28
LIMS2-209ENST00000410038 GTF2H4Q92759 462 aa13.33□□□□□ -0.28
LIMS2-209ENST00000410038 EXTL1Q92935 676 aa13.33□□□□□ -0.28
LIMS2-209ENST00000410038 FAM120BQ96EK7 910 aaKnown RBP13.33□□□□□ -0.28
LIMS2-209ENST00000410038 ITCHQ96J02 903 aa13.33□□□□□ -0.28
LIMS2-209ENST00000410038 BBC3Q96PG8 261 aaPredicted RBP13.33□□□□□ -0.28
LIMS2-209ENST00000410038 PANX1Q96RD7 426 aa13.33□□□□□ -0.28
LIMS2-209ENST00000410038 DEFB126Q9BYW3 111 aa13.33□□□□□ -0.28
LIMS2-209ENST00000410038 RMND5AQ9H871 391 aa13.33□□□□□ -0.28
LIMS2-209ENST00000410038 NTMQ9P121 344 aa13.33□□□□□ -0.28
LIMS2-209ENST00000410038 DTX4Q9Y2E6 619 aa13.33□□□□□ -0.28
LIMS2-209ENST00000410038 SNX8Q9Y5X2 465 aa13.33□□□□□ -0.28
LIMS2-209ENST00000410038 OR6C76A6NM76 312 aa13.32□□□□□ -0.28
LIMS2-209ENST00000410038 A8MUI8 341 aa13.32□□□□□ -0.28
LIMS2-209ENST00000410038 RFXANKO14593 260 aa13.32□□□□□ -0.28
LIMS2-209ENST00000410038 EMC8O43402 210 aa13.32□□□□□ -0.28
LIMS2-209ENST00000410038 CEACAM4O75871 244 aa13.32□□□□□ -0.28
LIMS2-209ENST00000410038 ZFAND5O76080 213 aa13.32□□□□□ -0.28
LIMS2-209ENST00000410038 PSMG1O95456 288 aa13.32□□□□□ -0.28
LIMS2-209ENST00000410038 ITGB2P05107 769 aa13.32□□□□□ -0.28
LIMS2-209ENST00000410038 CCT3P49368 545 aaKnown RBP13.32□□□□□ -0.28
LIMS2-209ENST00000410038 RAPSNQ13702 412 aa13.32□□□□□ -0.28
LIMS2-209ENST00000410038 MYBPC3Q14896 1274 aa13.32□□□□□ -0.28
LIMS2-209ENST00000410038 EBPQ15125 230 aaKnown RBP13.32□□□□□ -0.28
LIMS2-209ENST00000410038 PAGE3Q5JUK9 113 aa13.32□□□□□ -0.28
LIMS2-209ENST00000410038 TMEM64Q6YI46 380 aa13.32□□□□□ -0.28
LIMS2-209ENST00000410038 TREML1Q86YW5 311 aa13.32□□□□□ -0.28
LIMS2-209ENST00000410038 SIRT6Q8N6T7 355 aa13.32□□□□□ -0.28
LIMS2-209ENST00000410038 THAP3Q8WTV1 239 aaPredicted RBP13.32□□□□□ -0.28
LIMS2-209ENST00000410038 LRRC37BQ96QE4 947 aa13.32□□□□□ -0.28
LIMS2-209ENST00000410038 SLC25A23Q9BV35 468 aa13.32□□□□□ -0.28
LIMS2-209ENST00000410038 C3orf14Q9HBI5 128 aa13.32□□□□□ -0.28
LIMS2-209ENST00000410038 HEMK1Q9Y5R4 338 aaPredicted RBP13.32□□□□□ -0.28
LIMS2-209ENST00000410038 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.31□□□□□ -0.28
LIMS2-209ENST00000410038 LOC100653049A0A140TA62 436 aa13.31□□□□□ -0.28
LIMS2-209ENST00000410038 TMEM200CA6NKL6 621 aa13.31□□□□□ -0.28
LIMS2-209ENST00000410038 KRT34O76011 436 aa13.31□□□□□ -0.28
LIMS2-209ENST00000410038 GSNP06396 782 aa13.31□□□□□ -0.28
LIMS2-209ENST00000410038 PTPN6P29350 595 aa13.31□□□□□ -0.28
LIMS2-209ENST00000410038 SOAT1P35610 550 aa13.31□□□□□ -0.28
LIMS2-209ENST00000410038 PRKAG1P54619 331 aa13.31□□□□□ -0.28
LIMS2-209ENST00000410038 PRR5P85299 388 aa13.31□□□□□ -0.28
LIMS2-209ENST00000410038 GAB1Q13480 694 aa13.31□□□□□ -0.28
LIMS2-209ENST00000410038 MAPRE2Q15555 327 aa13.31□□□□□ -0.28
LIMS2-209ENST00000410038 C6orf10Q5SRN2 563 aa13.31□□□□□ -0.28
LIMS2-209ENST00000410038 IRAK1BP1Q5VVH5 260 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms