RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 TMEM178AQ8NBL3 297 aa18.36■□□□□ 0.53
PDLIM2-207ENST00000409417 SIMC1Q8NDZ2 872 aa18.36■□□□□ 0.53
PDLIM2-207ENST00000409417 OR52R1Q8NGF1 315 aa18.36■□□□□ 0.53
PDLIM2-207ENST00000409417 SLC22A8Q8TCC7 542 aa18.36■□□□□ 0.53
PDLIM2-207ENST00000409417 ADIPOR1Q96A54 375 aa18.36■□□□□ 0.53
PDLIM2-207ENST00000409417 TMEM125Q96AQ2 219 aa18.36■□□□□ 0.53
PDLIM2-207ENST00000409417 HPF1Q9NWY4 346 aa18.36■□□□□ 0.53
PDLIM2-207ENST00000409417 PRODH2Q9UF12 536 aa18.36■□□□□ 0.53
PDLIM2-207ENST00000409417 ERVK-11Q9UQG0 969 aa18.36■□□□□ 0.53
PDLIM2-207ENST00000409417 COPG1Q9Y678 874 aaKnown RBP18.36■□□□□ 0.53
PDLIM2-207ENST00000409417 ATP8B1O43520 1251 aa18.35■□□□□ 0.53
PDLIM2-207ENST00000409417 SP1P08047 785 aa18.35■□□□□ 0.53
PDLIM2-207ENST00000409417 DIO3P55073 304 aa18.35■□□□□ 0.53
PDLIM2-207ENST00000409417 C21orf58P58505 322 aa18.35■□□□□ 0.53
PDLIM2-207ENST00000409417 ZNF385BQ569K4 471 aa18.35■□□□□ 0.53
PDLIM2-207ENST00000409417 HSP90B2PQ58FF3 399 aa18.35■□□□□ 0.53
PDLIM2-207ENST00000409417 RIMKLAQ8IXN7 391 aa18.35■□□□□ 0.53
PDLIM2-207ENST00000409417 TAGAPQ8N103 731 aa18.35■□□□□ 0.53
PDLIM2-207ENST00000409417 KRTCAP2Q8N6L1 136 aa18.35■□□□□ 0.53
PDLIM2-207ENST00000409417 OR7G2Q8NG99 324 aa18.35■□□□□ 0.53
PDLIM2-207ENST00000409417 CKAP2Q8WWK9 683 aa18.35■□□□□ 0.53
PDLIM2-207ENST00000409417 CIDECQ96AQ7 238 aaPredicted RBP18.35■□□□□ 0.53
PDLIM2-207ENST00000409417 ZBED6CLQ96FA7 236 aaPredicted RBP18.35■□□□□ 0.53
PDLIM2-207ENST00000409417 BARD1Q99728 777 aaKnown RBP18.35■□□□□ 0.53
PDLIM2-207ENST00000409417 HES7Q9BYE0 225 aa18.35■□□□□ 0.53
PDLIM2-207ENST00000409417 SLCO1B3Q9NPD5 702 aa18.35■□□□□ 0.53
PDLIM2-207ENST00000409417 KLHL1Q9NR64 748 aa18.35■□□□□ 0.53
PDLIM2-207ENST00000409417 ACSS1Q9NUB1 689 aaPredicted RBP18.35■□□□□ 0.53
PDLIM2-207ENST00000409417 A0A087WV62 115 aa18.34■□□□□ 0.53
PDLIM2-207ENST00000409417 PLOD2O00469 737 aa18.34■□□□□ 0.53
PDLIM2-207ENST00000409417 NME2P1O60361 137 aa18.34■□□□□ 0.53
PDLIM2-207ENST00000409417 NADKO95544 446 aaPredicted RBP18.34■□□□□ 0.53
PDLIM2-207ENST00000409417 GPX3P22352 226 aa18.34■□□□□ 0.53
PDLIM2-207ENST00000409417 NME2P22392 152 aa18.34■□□□□ 0.53
PDLIM2-207ENST00000409417 EPHA3P29320 983 aa18.34■□□□□ 0.53
PDLIM2-207ENST00000409417 FRKP42685 505 aaPredicted RBP18.34■□□□□ 0.53
PDLIM2-207ENST00000409417 EMDP50402 254 aa18.34■□□□□ 0.53
PDLIM2-207ENST00000409417 CLDN8P56748 225 aa18.34■□□□□ 0.53
PDLIM2-207ENST00000409417 MAPKAPK3Q16644 382 aa18.34■□□□□ 0.53
PDLIM2-207ENST00000409417 CPTPQ5TA50 214 aa18.34■□□□□ 0.53
PDLIM2-207ENST00000409417 FHL5Q5TD97 284 aa18.34■□□□□ 0.53
PDLIM2-207ENST00000409417 IL20RBQ6UXL0 311 aa18.34■□□□□ 0.53
PDLIM2-207ENST00000409417 MDGA2Q7Z553 956 aa18.34■□□□□ 0.53
PDLIM2-207ENST00000409417 OR7A2PQ8NGA2 310 aa18.34■□□□□ 0.53
PDLIM2-207ENST00000409417 MIB2Q96AX9 1013 aa18.34■□□□□ 0.53
PDLIM2-207ENST00000409417 SGCZQ96LD1 299 aa18.34■□□□□ 0.53
PDLIM2-207ENST00000409417 MAGEB18Q96M61 343 aa18.34■□□□□ 0.53
PDLIM2-207ENST00000409417 PRPF18Q99633 342 aaKnown RBP18.34■□□□□ 0.53
PDLIM2-207ENST00000409417 TRIM4Q9C037 500 aa18.34■□□□□ 0.53
PDLIM2-207ENST00000409417 WDR55Q9H6Y2 383 aaPredicted RBP18.34■□□□□ 0.53
PDLIM2-207ENST00000409417 MED4Q9NPJ6 270 aa18.34■□□□□ 0.53
PDLIM2-207ENST00000409417 ASF1BQ9NVP2 202 aa18.34■□□□□ 0.53
PDLIM2-207ENST00000409417 MAPRE3Q9UPY8 281 aa18.34■□□□□ 0.53
PDLIM2-207ENST00000409417 DTX4Q9Y2E6 619 aa18.34■□□□□ 0.53
PDLIM2-207ENST00000409417 NTNG1Q9Y2I2 539 aa18.34■□□□□ 0.53
PDLIM2-207ENST00000409417 ZNF195O14628 629 aa18.33■□□□□ 0.53
PDLIM2-207ENST00000409417 RASAL1O95294 804 aa18.33■□□□□ 0.53
PDLIM2-207ENST00000409417 IFI6P09912 130 aa18.33■□□□□ 0.53
PDLIM2-207ENST00000409417 MC3RP41968 323 aa18.33■□□□□ 0.53
PDLIM2-207ENST00000409417 NR0B1P51843 470 aaKnown RBP18.33■□□□□ 0.53
PDLIM2-207ENST00000409417 MANFP55145 182 aaKnown RBP18.33■□□□□ 0.53
PDLIM2-207ENST00000409417 FOXK1P85037 733 aa18.33■□□□□ 0.53
PDLIM2-207ENST00000409417 FAM180AQ6UWF9 173 aa18.33■□□□□ 0.53
PDLIM2-207ENST00000409417 RGS9BPQ6ZS82 235 aa18.33■□□□□ 0.53
PDLIM2-207ENST00000409417 ZNF551Q7Z340 670 aaPredicted RBP18.33■□□□□ 0.53
PDLIM2-207ENST00000409417 MAVSQ7Z434 540 aa18.33■□□□□ 0.53
PDLIM2-207ENST00000409417 DND1Q8IYX4 353 aaKnown RBP18.33■□□□□ 0.53
PDLIM2-207ENST00000409417 ZFP28Q8NHY6 868 aa18.33■□□□□ 0.53
PDLIM2-207ENST00000409417 GRHL3Q8TE85 626 aa18.33■□□□□ 0.53
PDLIM2-207ENST00000409417 COQ8BQ96D53 544 aa18.33■□□□□ 0.53
PDLIM2-207ENST00000409417 ELP4Q96EB1 424 aa18.33■□□□□ 0.53
PDLIM2-207ENST00000409417 MAELQ96JY0 434 aaKnown RBP18.33■□□□□ 0.53
PDLIM2-207ENST00000409417 TAAR6Q96RI8 345 aa18.33■□□□□ 0.53
PDLIM2-207ENST00000409417 ANKRA2Q9H9E1 313 aa18.33■□□□□ 0.53
PDLIM2-207ENST00000409417 TIMMDC1Q9NPL8 285 aa18.33■□□□□ 0.53
PDLIM2-207ENST00000409417 AGPAT4Q9NRZ5 378 aa18.33■□□□□ 0.53
PDLIM2-207ENST00000409417 ATAD3AQ9NVI7 634 aa18.33■□□□□ 0.53
PDLIM2-207ENST00000409417 C19orf53Q9UNZ5 99 aaPredicted RBP18.33■□□□□ 0.53
PDLIM2-207ENST00000409417 GOLGA8QA0A0J9YX86 632 aa18.33■□□□□ 0.52
PDLIM2-207ENST00000409417 GOLGA8OA6NCC3 632 aa18.33■□□□□ 0.52
PDLIM2-207ENST00000409417 GOLGA8NF8WBI6 632 aa18.33■□□□□ 0.52
PDLIM2-207ENST00000409417 J3QKU1 62 aa18.33■□□□□ 0.52
PDLIM2-207ENST00000409417 FBXO45P0C2W1 286 aa18.33■□□□□ 0.52
PDLIM2-207ENST00000409417 LAMP1P11279 417 aa18.33■□□□□ 0.52
PDLIM2-207ENST00000409417 DCAF7P61962 342 aa18.33■□□□□ 0.52
PDLIM2-207ENST00000409417 IGFBP7Q16270 282 aa18.33■□□□□ 0.52
PDLIM2-207ENST00000409417 ZNF791Q3KP31 576 aaPredicted RBP18.33■□□□□ 0.52
PDLIM2-207ENST00000409417 TMEM107Q6UX40 140 aa18.33■□□□□ 0.52
PDLIM2-207ENST00000409417 LYPD8Q6UX82 237 aa18.33■□□□□ 0.52
PDLIM2-207ENST00000409417 RTL4Q6ZR62 310 aa18.33■□□□□ 0.52
PDLIM2-207ENST00000409417 GALNTL5Q7Z4T8 443 aa18.33■□□□□ 0.52
PDLIM2-207ENST00000409417 SPATA19Q7Z5L4 167 aa18.33■□□□□ 0.52
PDLIM2-207ENST00000409417 OR2L13Q8N349 312 aa18.33■□□□□ 0.52
PDLIM2-207ENST00000409417 NATD1Q8N6N6 113 aa18.33■□□□□ 0.52
PDLIM2-207ENST00000409417 BCORP1Q8N888 145 aa18.33■□□□□ 0.52
PDLIM2-207ENST00000409417 GOLM1Q8NBJ4 401 aa18.33■□□□□ 0.52
PDLIM2-207ENST00000409417 ACTRT2Q8TDY3 377 aa18.33■□□□□ 0.52
PDLIM2-207ENST00000409417 SPACA9Q96E40 222 aaPredicted RBP18.33■□□□□ 0.52
PDLIM2-207ENST00000409417 ITPAQ9BY32 194 aa18.33■□□□□ 0.52
PDLIM2-207ENST00000409417 TAS2R9Q9NYW1 312 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms