RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 EID2BQ96D98 161 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 ZDHHC12Q96GR4 267 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 PDLIM5Q96HC4 596 aaKnown RBP5.18□□□□□ -1.58
CLK1-202ENST00000409403 BBS4Q96RK4 519 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 SEPHS2Q99611 448 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 APOL2Q9BQE5 337 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 ADPGKQ9BRR6 497 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 SORBS1Q9BX66 1292 aaKnown RBP5.18□□□□□ -1.58
CLK1-202ENST00000409403 ACTRT3Q9BYD9 372 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 CD93Q9NPY3 652 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 ANKEF1Q9NU02 776 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 MCUBQ9NWR8 336 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 DPP3Q9NY33 737 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 ERAP1Q9NZ08 941 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 ACAD8Q9UKU7 415 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 RUVBL2Q9Y230 463 aaKnown RBP5.18□□□□□ -1.58
CLK1-202ENST00000409403 MAB21L2Q9Y586 359 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 RAI2Q9Y5P3 530 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 PSAT1Q9Y617 370 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 RNF215Q9Y6U7 377 aa5.18□□□□□ -1.58
CLK1-202ENST00000409403 MCM3APO60318 1980 aa5.17□□□□□ -1.58
CLK1-202ENST00000409403 UBR5O95071 2799 aaPredicted RBP5.17□□□□□ -1.58
CLK1-202ENST00000409403 MICAL3Q7RTP6 2002 aa5.17□□□□□ -1.58
CLK1-202ENST00000409403 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.17□□□□□ -1.58
CLK1-202ENST00000409403 TMEM8BA6NDV4 472 aa5.17□□□□□ -1.58
CLK1-202ENST00000409403 UNC119BA6NIH7 251 aa5.17□□□□□ -1.58
CLK1-202ENST00000409403 B4DXG7 233 aa5.17□□□□□ -1.58
CLK1-202ENST00000409403 KPNA3O00505 521 aaPredicted RBP5.17□□□□□ -1.58
CLK1-202ENST00000409403 DSCR3O14972 297 aa5.17□□□□□ -1.58
CLK1-202ENST00000409403 INPPL1O15357 1258 aa5.17□□□□□ -1.58
CLK1-202ENST00000409403 PSMD3O43242 534 aa5.17□□□□□ -1.58
CLK1-202ENST00000409403 SSX5O60225 188 aa5.17□□□□□ -1.58
CLK1-202ENST00000409403 PSIP1O75475 530 aaKnown RBP5.17□□□□□ -1.58
CLK1-202ENST00000409403 SCO1O75880 301 aa5.17□□□□□ -1.58
CLK1-202ENST00000409403 RECQL5O94762 991 aaPredicted RBP5.17□□□□□ -1.58
CLK1-202ENST00000409403 SPDEFO95238 335 aa5.17□□□□□ -1.58
CLK1-202ENST00000409403 METTL18O95568 372 aa5.17□□□□□ -1.58
CLK1-202ENST00000409403 VIPP01282 170 aa5.17□□□□□ -1.58
CLK1-202ENST00000409403 RAF1P04049 648 aa5.17□□□□□ -1.58
CLK1-202ENST00000409403 ERVK-10P10266 1014 aa5.17□□□□□ -1.58
CLK1-202ENST00000409403 PRKAR1AP10644 381 aa5.17□□□□□ -1.58
CLK1-202ENST00000409403 CD1EP15812 388 aa5.17□□□□□ -1.58
CLK1-202ENST00000409403 PPP3CBP16298 524 aa5.17□□□□□ -1.58
CLK1-202ENST00000409403 LBPP18428 481 aa5.17□□□□□ -1.58
CLK1-202ENST00000409403 ITGB6P18564 788 aa5.17□□□□□ -1.58
CLK1-202ENST00000409403 GADD45AP24522 165 aa5.17□□□□□ -1.58
CLK1-202ENST00000409403 PTBP1P26599 531 aaKnown RBP eCLIP5.17□□□□□ -1.58
CLK1-202ENST00000409403 MAP2K4P45985 399 aa5.17□□□□□ -1.58
CLK1-202ENST00000409403 RFX2P48378 723 aa5.17□□□□□ -1.58
CLK1-202ENST00000409403 LIG4P49917 911 aa5.17□□□□□ -1.58
CLK1-202ENST00000409403 CSRP3P50461 194 aa5.17□□□□□ -1.58
CLK1-202ENST00000409403 CLCN5P51795 746 aa5.17□□□□□ -1.58
CLK1-202ENST00000409403 RIPPLY3P57055 190 aa5.17□□□□□ -1.58
CLK1-202ENST00000409403 RAB10P61026 200 aa5.17□□□□□ -1.58
CLK1-202ENST00000409403 RRAS2P62070 204 aaPredicted RBP5.17□□□□□ -1.58
CLK1-202ENST00000409403 EMX2Q04743 252 aa5.17□□□□□ -1.58
CLK1-202ENST00000409403 HYAL1Q12794 435 aa5.17□□□□□ -1.58
CLK1-202ENST00000409403 CDH17Q12864 832 aa5.17□□□□□ -1.58
CLK1-202ENST00000409403 TAF12Q16514 161 aa5.17□□□□□ -1.58
CLK1-202ENST00000409403 BAK1Q16611 211 aa5.17□□□□□ -1.58
CLK1-202ENST00000409403 DUSP6Q16828 381 aa5.17□□□□□ -1.58
CLK1-202ENST00000409403 HKDC1Q2TB90 917 aa5.17□□□□□ -1.58
CLK1-202ENST00000409403 Q3ZCU0 254 aa5.17□□□□□ -1.58
CLK1-202ENST00000409403 NRN1LQ496H8 165 aa5.17□□□□□ -1.58
CLK1-202ENST00000409403 MLIPQ5VWP3 458 aa5.17□□□□□ -1.58
CLK1-202ENST00000409403 LRRC66Q68CR7 880 aa5.17□□□□□ -1.58
CLK1-202ENST00000409403 ABLIM2Q6H8Q1 611 aa5.17□□□□□ -1.58
CLK1-202ENST00000409403 TANGO2Q6ICL3 276 aa5.17□□□□□ -1.58
CLK1-202ENST00000409403 SPESP1Q6UW49 350 aa5.17□□□□□ -1.58
CLK1-202ENST00000409403 RANBP10Q6VN20 620 aa5.17□□□□□ -1.58
CLK1-202ENST00000409403 TFAP2EQ6VUC0 442 aa5.17□□□□□ -1.58
CLK1-202ENST00000409403 RBM23Q86U06 439 aaKnown RBP5.17□□□□□ -1.58
CLK1-202ENST00000409403 KCNMB4Q86W47 210 aa5.17□□□□□ -1.58
CLK1-202ENST00000409403 GHDCQ8N2G8 530 aa5.17□□□□□ -1.58
CLK1-202ENST00000409403 C9orf62Q8N4C0 152 aa5.17□□□□□ -1.58
CLK1-202ENST00000409403 LRRC17Q8N6Y2 441 aa5.17□□□□□ -1.58
CLK1-202ENST00000409403 ZNF366Q8N895 744 aa5.17□□□□□ -1.58
CLK1-202ENST00000409403 ZNF431Q8TF32 576 aaPredicted RBP5.17□□□□□ -1.58
CLK1-202ENST00000409403 HTR3CQ8WXA8 447 aa5.17□□□□□ -1.58
CLK1-202ENST00000409403 YIPF5Q969M3 257 aa5.17□□□□□ -1.58
CLK1-202ENST00000409403 SLC47A1Q96FL8 570 aa5.17□□□□□ -1.58
CLK1-202ENST00000409403 C1orf74Q96LT6 269 aa5.17□□□□□ -1.58
CLK1-202ENST00000409403 HIST1H2AAQ96QV6 131 aa5.17□□□□□ -1.58
CLK1-202ENST00000409403 C12orf57Q99622 126 aa5.17□□□□□ -1.58
CLK1-202ENST00000409403 FAM213AQ9BRX8 229 aa5.17□□□□□ -1.58
CLK1-202ENST00000409403 NTPCRQ9BSD7 190 aaKnown RBP5.17□□□□□ -1.58
CLK1-202ENST00000409403 BBS2Q9BXC9 721 aa5.17□□□□□ -1.58
CLK1-202ENST00000409403 HDHD5Q9BXW7 423 aa5.17□□□□□ -1.58
CLK1-202ENST00000409403 SLC19A3Q9BZV2 496 aa5.17□□□□□ -1.58
CLK1-202ENST00000409403 GAREM1Q9H706 876 aa5.17□□□□□ -1.58
CLK1-202ENST00000409403 NT5DC2Q9H857 520 aa5.17□□□□□ -1.58
CLK1-202ENST00000409403 GORASP2Q9H8Y8 452 aa5.17□□□□□ -1.58
CLK1-202ENST00000409403 SLC35C2Q9NQQ7 365 aa5.17□□□□□ -1.58
CLK1-202ENST00000409403 SDR39U1Q9NRG7 319 aaPredicted RBP5.17□□□□□ -1.58
CLK1-202ENST00000409403 HPF1Q9NWY4 346 aa5.17□□□□□ -1.58
CLK1-202ENST00000409403 RCOR3Q9P2K3 495 aaPredicted RBP5.17□□□□□ -1.58
CLK1-202ENST00000409403 LIPT1Q9Y234 373 aa5.17□□□□□ -1.58
CLK1-202ENST00000409403 MRPS7Q9Y2R9 242 aaKnown RBP5.17□□□□□ -1.58
CLK1-202ENST00000409403 GPR52Q9Y2T5 361 aa5.17□□□□□ -1.58
CLK1-202ENST00000409403 GMPPBQ9Y5P6 360 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms