RNA–Protein interactions for RNA: ENST00000409364.3

GTF3C3-202, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GTF3C3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-202ENST00000409364 OR4C15Q8NGM1 316 aa5.89□□□□□ -1.47
GTF3C3-202ENST00000409364 OR9A2Q8NGT5 310 aa5.89□□□□□ -1.47
GTF3C3-202ENST00000409364 ADAMTS15Q8TE58 950 aa5.89□□□□□ -1.47
GTF3C3-202ENST00000409364 PHF10Q8WUB8 498 aaKnown RBP5.89□□□□□ -1.47
GTF3C3-202ENST00000409364 FBLIM1Q8WUP2 373 aa5.89□□□□□ -1.47
GTF3C3-202ENST00000409364 COL26A1Q96A83 441 aa5.89□□□□□ -1.47
GTF3C3-202ENST00000409364 HSPA12BQ96MM6 686 aa5.89□□□□□ -1.47
GTF3C3-202ENST00000409364 GUCD1Q96NT3 240 aa5.89□□□□□ -1.47
GTF3C3-202ENST00000409364 COL21A1Q96P44 957 aa5.89□□□□□ -1.47
GTF3C3-202ENST00000409364 TRNT1Q96Q11 434 aaKnown RBP5.89□□□□□ -1.47
GTF3C3-202ENST00000409364 TSC22D3Q99576 134 aa5.89□□□□□ -1.47
GTF3C3-202ENST00000409364 FEVQ99581 238 aa5.89□□□□□ -1.47
GTF3C3-202ENST00000409364 BARD1Q99728 777 aaKnown RBP5.89□□□□□ -1.47
GTF3C3-202ENST00000409364 PSD2Q9BQI7 771 aa5.89□□□□□ -1.47
GTF3C3-202ENST00000409364 YIPF3Q9GZM5 350 aa5.89□□□□□ -1.47
GTF3C3-202ENST00000409364 CHRNA10Q9GZZ6 450 aa5.89□□□□□ -1.47
GTF3C3-202ENST00000409364 RAB33BQ9H082 229 aa5.89□□□□□ -1.47
GTF3C3-202ENST00000409364 DUSP15Q9H1R2 295 aaPredicted RBP5.89□□□□□ -1.47
GTF3C3-202ENST00000409364 ADNPQ9H2P0 1102 aa5.89□□□□□ -1.47
GTF3C3-202ENST00000409364 SERHL2Q9H4I8 314 aa5.89□□□□□ -1.47
GTF3C3-202ENST00000409364 RIBC2Q9H4K1 309 aa5.89□□□□□ -1.47
GTF3C3-202ENST00000409364 MTHFD2LQ9H903 347 aaPredicted RBP5.89□□□□□ -1.47
GTF3C3-202ENST00000409364 ANKHQ9HCJ1 492 aa5.89□□□□□ -1.47
GTF3C3-202ENST00000409364 VCX3AQ9NNX9 186 aa5.89□□□□□ -1.47
GTF3C3-202ENST00000409364 EVA1BQ9NVM1 165 aa5.89□□□□□ -1.47
GTF3C3-202ENST00000409364 GIN1Q9NXP7 522 aa5.89□□□□□ -1.47
GTF3C3-202ENST00000409364 EPHA6Q9UF33 1036 aa5.89□□□□□ -1.47
GTF3C3-202ENST00000409364 NDRG4Q9ULP0 352 aaKnown RBP5.89□□□□□ -1.47
GTF3C3-202ENST00000409364 TMCC3Q9ULS5 477 aa5.89□□□□□ -1.47
GTF3C3-202ENST00000409364 ZNF232Q9UNY5 417 aa5.89□□□□□ -1.47
GTF3C3-202ENST00000409364 SLC9A8Q9Y2E8 581 aa5.89□□□□□ -1.47
GTF3C3-202ENST00000409364 POFUT2Q9Y2G5 429 aa5.89□□□□□ -1.47
GTF3C3-202ENST00000409364 GMPPBQ9Y5P6 360 aa5.89□□□□□ -1.47
GTF3C3-202ENST00000409364 CSNK1G3Q9Y6M4 447 aa5.89□□□□□ -1.47
GTF3C3-202ENST00000409364 SPTBN5Q9NRC6 3674 aaKnown RBP5.89□□□□□ -1.47
GTF3C3-202ENST00000409364 HEATR5BQ9P2D3 2071 aa5.89□□□□□ -1.47
GTF3C3-202ENST00000409364 KNL1Q8NG31 2342 aa5.89□□□□□ -1.47
GTF3C3-202ENST00000409364 A0A087WV62 115 aa5.88□□□□□ -1.47
GTF3C3-202ENST00000409364 CCDC163A0A0D9SF12 145 aa5.88□□□□□ -1.47
GTF3C3-202ENST00000409364 A0A1B0GTW7 788 aa5.88□□□□□ -1.47
GTF3C3-202ENST00000409364 PRAMEF27A3QJZ7 478 aa5.88□□□□□ -1.47
GTF3C3-202ENST00000409364 BLACEA4D250 179 aa5.88□□□□□ -1.47
GTF3C3-202ENST00000409364 CCDC160A6NGH7 325 aa5.88□□□□□ -1.47
GTF3C3-202ENST00000409364 PRAMEF25A6NGN4 478 aa5.88□□□□□ -1.47
GTF3C3-202ENST00000409364 SLC9B1P1A6NJY1 282 aa5.88□□□□□ -1.47
GTF3C3-202ENST00000409364 RHPN2P1A8MT19 583 aa5.88□□□□□ -1.47
GTF3C3-202ENST00000409364 CYR61O00622 381 aa5.88□□□□□ -1.47
GTF3C3-202ENST00000409364 CASC3O15234 703 aaKnown RBP5.88□□□□□ -1.47
GTF3C3-202ENST00000409364 BCAT2O15382 392 aaPredicted RBP5.88□□□□□ -1.47
GTF3C3-202ENST00000409364 PLOD3O60568 738 aa5.88□□□□□ -1.47
GTF3C3-202ENST00000409364 CCNB2O95067 398 aa5.88□□□□□ -1.47
GTF3C3-202ENST00000409364 OXSR1O95747 527 aaPredicted RBP5.88□□□□□ -1.47
GTF3C3-202ENST00000409364 ATP1B1P05026 303 aa5.88□□□□□ -1.47
GTF3C3-202ENST00000409364 ST6GAL1P15907 406 aa5.88□□□□□ -1.47
GTF3C3-202ENST00000409364 TNFRSF1BP20333 461 aa5.88□□□□□ -1.47
GTF3C3-202ENST00000409364 CRHBPP24387 322 aa5.88□□□□□ -1.47
GTF3C3-202ENST00000409364 ELK4P28324 431 aa5.88□□□□□ -1.47
GTF3C3-202ENST00000409364 HOXA6P31267 233 aa5.88□□□□□ -1.47
GTF3C3-202ENST00000409364 MC3RP41968 323 aa5.88□□□□□ -1.47
GTF3C3-202ENST00000409364 YAP1P46937 504 aaKnown RBP5.88□□□□□ -1.47
GTF3C3-202ENST00000409364 CAPZBP47756 277 aa5.88□□□□□ -1.47
GTF3C3-202ENST00000409364 LIMS1P48059 325 aa5.88□□□□□ -1.47
GTF3C3-202ENST00000409364 MAN2A2P49641 1150 aa5.88□□□□□ -1.47
GTF3C3-202ENST00000409364 CSNK1EP49674 416 aaKnown RBP5.88□□□□□ -1.47
GTF3C3-202ENST00000409364 AFF3P51826 1226 aaKnown RBP5.88□□□□□ -1.47
GTF3C3-202ENST00000409364 EPHA4P54764 986 aa5.88□□□□□ -1.47
GTF3C3-202ENST00000409364 CDH15P55291 814 aa5.88□□□□□ -1.47
GTF3C3-202ENST00000409364 RAB38P57729 211 aa5.88□□□□□ -1.47
GTF3C3-202ENST00000409364 RPP38P78345 283 aaKnown RBP5.88□□□□□ -1.47
GTF3C3-202ENST00000409364 SIM1P81133 766 aaPredicted RBP5.88□□□□□ -1.47
GTF3C3-202ENST00000409364 IL5RAQ01344 420 aa5.88□□□□□ -1.47
GTF3C3-202ENST00000409364 DUSP2Q05923 314 aa5.88□□□□□ -1.47
GTF3C3-202ENST00000409364 CDK5R2Q13319 367 aa5.88□□□□□ -1.47
GTF3C3-202ENST00000409364 FAM53BQ14153 422 aa5.88□□□□□ -1.47
GTF3C3-202ENST00000409364 MEP1AQ16819 746 aa5.88□□□□□ -1.47
GTF3C3-202ENST00000409364 PRTGQ2VWP7 1150 aa5.88□□□□□ -1.47
GTF3C3-202ENST00000409364 CNPY1Q3B7I2 92 aa5.88□□□□□ -1.47
GTF3C3-202ENST00000409364 ZBED5Q49AG3 693 aa5.88□□□□□ -1.47
GTF3C3-202ENST00000409364 GPAT3Q53EU6 434 aa5.88□□□□□ -1.47
GTF3C3-202ENST00000409364 RPS26P11Q5JNZ5 115 aaPredicted RBP5.88□□□□□ -1.47
GTF3C3-202ENST00000409364 TCTE1Q5JU00 501 aa5.88□□□□□ -1.47
GTF3C3-202ENST00000409364 GARNL3Q5VVW2 1013 aa5.88□□□□□ -1.47
GTF3C3-202ENST00000409364 BROXQ5VW32 411 aa5.88□□□□□ -1.47
GTF3C3-202ENST00000409364 TCTN3Q6NUS6 607 aa5.88□□□□□ -1.47
GTF3C3-202ENST00000409364 ZCCHC12Q6PEW1 402 aa5.88□□□□□ -1.47
GTF3C3-202ENST00000409364 ZNF773Q6PK81 442 aa5.88□□□□□ -1.47
GTF3C3-202ENST00000409364 RBM44Q6ZP01 1051 aaKnown RBP5.88□□□□□ -1.47
GTF3C3-202ENST00000409364 GPR141Q7Z602 305 aa5.88□□□□□ -1.47
GTF3C3-202ENST00000409364 ZNF605Q86T29 641 aa5.88□□□□□ -1.47
GTF3C3-202ENST00000409364 ZNF761Q86XN6 746 aaPredicted RBP5.88□□□□□ -1.47
GTF3C3-202ENST00000409364 OR2L13Q8N349 312 aa5.88□□□□□ -1.47
GTF3C3-202ENST00000409364 LINC00471Q8N535 108 aa5.88□□□□□ -1.47
GTF3C3-202ENST00000409364 SLC5A8Q8N695 610 aa5.88□□□□□ -1.47
GTF3C3-202ENST00000409364 CHDHQ8NE62 594 aaPredicted RBP5.88□□□□□ -1.47
GTF3C3-202ENST00000409364 GPR32P1Q8NGA4 272 aa5.88□□□□□ -1.47
GTF3C3-202ENST00000409364 OR5D16Q8NGK9 328 aa5.88□□□□□ -1.47
GTF3C3-202ENST00000409364 OR52J3Q8NH60 311 aa5.88□□□□□ -1.47
GTF3C3-202ENST00000409364 APOBEC4Q8WW27 367 aaKnown RBP5.88□□□□□ -1.47
GTF3C3-202ENST00000409364 KLHL6Q8WZ60 621 aa5.88□□□□□ -1.47
GTF3C3-202ENST00000409364 NR4A3Q92570 626 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms