RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 ZNF584Q8IVC4 421 aa16.85■□□□□ 0.29
SMPD4-202ENST00000409031 C17orf62Q9BQA9 187 aa16.85■□□□□ 0.29
SMPD4-202ENST00000409031 UPK3BL1B0FP48 263 aa16.85■□□□□ 0.29
SMPD4-202ENST00000409031 UPK3BL2E5RIL1 263 aa16.85■□□□□ 0.29
SMPD4-202ENST00000409031 EDNRBP24530 442 aa16.85■□□□□ 0.29
SMPD4-202ENST00000409031 ZNF91Q05481 1191 aa16.85■□□□□ 0.29
SMPD4-202ENST00000409031 TMEM205Q6UW68 189 aa16.85■□□□□ 0.29
SMPD4-202ENST00000409031 DEFB128Q7Z7B8 93 aa16.85■□□□□ 0.29
SMPD4-202ENST00000409031 TMPRSS12Q86WS5 348 aa16.85■□□□□ 0.29
SMPD4-202ENST00000409031 KCTD12Q96CX2 325 aaKnown RBP16.85■□□□□ 0.29
SMPD4-202ENST00000409031 NUP188Q5SRE5 1749 aa16.85■□□□□ 0.29
SMPD4-202ENST00000409031 LCMT2O60294 686 aaKnown RBP16.84■□□□□ 0.29
SMPD4-202ENST00000409031 ZNF30P17039 623 aa16.84■□□□□ 0.29
SMPD4-202ENST00000409031 ASAH1Q13510 395 aa16.84■□□□□ 0.29
SMPD4-202ENST00000409031 FUT10Q6P4F1 479 aa16.84■□□□□ 0.29
SMPD4-202ENST00000409031 SHFQ7M4L6 423 aa16.84■□□□□ 0.29
SMPD4-202ENST00000409031 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.84■□□□□ 0.29
SMPD4-202ENST00000409031 TMEM19Q96HH6 336 aa16.84■□□□□ 0.29
SMPD4-202ENST00000409031 MRI1Q9BV20 369 aa16.84■□□□□ 0.29
SMPD4-202ENST00000409031 RIOK2Q9BVS4 552 aaKnown RBP16.84■□□□□ 0.29
SMPD4-202ENST00000409031 ABCG4Q9H172 646 aa16.84■□□□□ 0.29
SMPD4-202ENST00000409031 FBXO10Q9UK96 956 aa16.84■□□□□ 0.29
SMPD4-202ENST00000409031 COLEC10Q9Y6Z7 277 aa16.84■□□□□ 0.29
SMPD4-202ENST00000409031 EIF3FO00303 357 aaPredicted RBP16.84■□□□□ 0.29
SMPD4-202ENST00000409031 CACNB4O00305 520 aaPredicted RBP16.84■□□□□ 0.29
SMPD4-202ENST00000409031 RAB3AP20336 220 aa16.84■□□□□ 0.29
SMPD4-202ENST00000409031 APEX1P27695 318 aaKnown RBP16.84■□□□□ 0.29
SMPD4-202ENST00000409031 GAS6Q14393 721 aa16.84■□□□□ 0.29
SMPD4-202ENST00000409031 FCN2Q15485 313 aa16.84■□□□□ 0.29
SMPD4-202ENST00000409031 C18orf21Q32NC0 220 aaPredicted RBP16.84■□□□□ 0.29
SMPD4-202ENST00000409031 TIGD3Q6B0B8 471 aa16.84■□□□□ 0.29
SMPD4-202ENST00000409031 CPPED1Q9BRF8 314 aaPredicted RBP16.84■□□□□ 0.29
SMPD4-202ENST00000409031 MTIF3Q9H2K0 278 aaKnown RBP16.84■□□□□ 0.29
SMPD4-202ENST00000409031 GPR52Q9Y2T5 361 aa16.84■□□□□ 0.29
SMPD4-202ENST00000409031 IGKV6-21A0A0C4DH24 114 aa16.84■□□□□ 0.29
SMPD4-202ENST00000409031 A0A0D9SEW6 157 aa16.84■□□□□ 0.29
SMPD4-202ENST00000409031 UBXN7O94888 489 aa16.84■□□□□ 0.29
SMPD4-202ENST00000409031 LALBAP00709 142 aa16.84■□□□□ 0.29
SMPD4-202ENST00000409031 C1GALT1C1LP0DN25 315 aa16.84■□□□□ 0.29
SMPD4-202ENST00000409031 NAT1P18440 290 aa16.84■□□□□ 0.29
SMPD4-202ENST00000409031 ACRV1P26436 265 aa16.84■□□□□ 0.29
SMPD4-202ENST00000409031 RNF111Q6ZNA4 994 aa16.84■□□□□ 0.29
SMPD4-202ENST00000409031 ENTHD1Q8IYW4 607 aa16.84■□□□□ 0.29
SMPD4-202ENST00000409031 OR10G6Q8NH81 332 aa16.84■□□□□ 0.29
SMPD4-202ENST00000409031 METTL17Q9H7H0 456 aaPredicted RBP16.84■□□□□ 0.29
SMPD4-202ENST00000409031 FANCFQ9NPI8 374 aa16.84■□□□□ 0.29
SMPD4-202ENST00000409031 PRMT8Q9NR22 394 aaPredicted RBP16.84■□□□□ 0.29
SMPD4-202ENST00000409031 CCDC88AQ3V6T2 1871 aa16.84■□□□□ 0.29
SMPD4-202ENST00000409031 UNC119BA6NIH7 251 aa16.84■□□□□ 0.29
SMPD4-202ENST00000409031 HOXC11O43248 304 aaPredicted RBP16.84■□□□□ 0.29
SMPD4-202ENST00000409031 CACNG3O60359 315 aa16.84■□□□□ 0.29
SMPD4-202ENST00000409031 CD3GP09693 182 aa16.84■□□□□ 0.29
SMPD4-202ENST00000409031 CERS1P27544 350 aa16.84■□□□□ 0.29
SMPD4-202ENST00000409031 EIF2S3P41091 472 aaKnown RBP16.84■□□□□ 0.29
SMPD4-202ENST00000409031 RGS19P49795 217 aa16.84■□□□□ 0.29
SMPD4-202ENST00000409031 VAMP2P63027 116 aa16.84■□□□□ 0.29
SMPD4-202ENST00000409031 POMZP3Q6PJE2 187 aa16.84■□□□□ 0.29
SMPD4-202ENST00000409031 PDZD3Q86UT5 571 aa16.84■□□□□ 0.29
SMPD4-202ENST00000409031 PNPLA1Q8N8W4 532 aa16.84■□□□□ 0.29
SMPD4-202ENST00000409031 OR56A3Q8NH54 315 aa16.84■□□□□ 0.29
SMPD4-202ENST00000409031 SORCS1Q8WY21 1168 aa16.84■□□□□ 0.29
SMPD4-202ENST00000409031 NSMAFQ92636 917 aa16.84■□□□□ 0.29
SMPD4-202ENST00000409031 E7EQ34 232 aa16.83■□□□□ 0.29
SMPD4-202ENST00000409031 GOSR2O14653 212 aa16.83■□□□□ 0.29
SMPD4-202ENST00000409031 VNN2O95498 520 aa16.83■□□□□ 0.29
SMPD4-202ENST00000409031 IFNA17P01571 189 aa16.83■□□□□ 0.29
SMPD4-202ENST00000409031 JUNDP17535 347 aa16.83■□□□□ 0.29
SMPD4-202ENST00000409031 HMGCLP35914 325 aa16.83■□□□□ 0.29
SMPD4-202ENST00000409031 PTH2RP49190 550 aa16.83■□□□□ 0.29
SMPD4-202ENST00000409031 CLVS2Q5SYC1 327 aa16.83■□□□□ 0.29
SMPD4-202ENST00000409031 KCTD11Q693B1 232 aa16.83■□□□□ 0.29
SMPD4-202ENST00000409031 BRAT1Q6PJG6 821 aa16.83■□□□□ 0.29
SMPD4-202ENST00000409031 PARGQ86W56 976 aa16.83■□□□□ 0.29
SMPD4-202ENST00000409031 GRAMD2AQ8IUY3 354 aa16.83■□□□□ 0.29
SMPD4-202ENST00000409031 C12orf45Q8N5I9 185 aaPredicted RBP16.83■□□□□ 0.29
SMPD4-202ENST00000409031 SLC7A13Q8TCU3 470 aa16.83■□□□□ 0.29
SMPD4-202ENST00000409031 AMBRA1Q9C0C7 1298 aa16.83■□□□□ 0.29
SMPD4-202ENST00000409031 MRPS30Q9NP92 439 aaKnown RBP16.83■□□□□ 0.29
SMPD4-202ENST00000409031 ANHXE9PGG2 379 aa16.83■□□□□ 0.28
SMPD4-202ENST00000409031 SULT1B1O43704 296 aa16.83■□□□□ 0.28
SMPD4-202ENST00000409031 B3GALT2O43825 422 aa16.83■□□□□ 0.28
SMPD4-202ENST00000409031 INHBEP58166 350 aa16.83■□□□□ 0.28
SMPD4-202ENST00000409031 ZNF101Q8IZC7 436 aa16.83■□□□□ 0.28
SMPD4-202ENST00000409031 DCAF4L2Q8NA75 395 aa16.83■□□□□ 0.28
SMPD4-202ENST00000409031 OR9A1PQ8NGU1 263 aa16.83■□□□□ 0.28
SMPD4-202ENST00000409031 NEK7Q8TDX7 302 aa16.83■□□□□ 0.28
SMPD4-202ENST00000409031 NTMT1Q9BV86 223 aa16.83■□□□□ 0.28
SMPD4-202ENST00000409031 POT1Q9NUX5 634 aa16.83■□□□□ 0.28
SMPD4-202ENST00000409031 SOCS5O75159 536 aa16.83■□□□□ 0.28
SMPD4-202ENST00000409031 CD34P28906 385 aa16.83■□□□□ 0.28
SMPD4-202ENST00000409031 RING1Q06587 406 aa16.83■□□□□ 0.28
SMPD4-202ENST00000409031 PGAP1Q75T13 922 aa16.83■□□□□ 0.28
SMPD4-202ENST00000409031 ELP4Q96EB1 424 aa16.83■□□□□ 0.28
SMPD4-202ENST00000409031 ATP13A2Q9NQ11 1180 aa16.83■□□□□ 0.28
SMPD4-202ENST00000409031 TAC3Q9UHF0 121 aa16.83■□□□□ 0.28
SMPD4-202ENST00000409031 TMPRSS11EQ9UL52 423 aa16.83■□□□□ 0.28
SMPD4-202ENST00000409031 C14orf166Q9Y224 244 aaKnown RBP16.83■□□□□ 0.28
SMPD4-202ENST00000409031 ADH7P40394 386 aa16.82■□□□□ 0.28
SMPD4-202ENST00000409031 FRKP42685 505 aaPredicted RBP16.82■□□□□ 0.28
SMPD4-202ENST00000409031 PLK5Q496M5 336 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms