RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 PITPNBP48739 271 aa12.12□□□□□ -0.47
HERC3-203ENST00000407637 XKP51811 444 aa12.12□□□□□ -0.47
HERC3-203ENST00000407637 MELKQ14680 651 aa12.12□□□□□ -0.47
HERC3-203ENST00000407637 SYT12Q8IV01 421 aa12.12□□□□□ -0.47
HERC3-203ENST00000407637 TOMM5Q8N4H5 51 aa12.12□□□□□ -0.47
HERC3-203ENST00000407637 SAMD12Q8N8I0 201 aa12.12□□□□□ -0.47
HERC3-203ENST00000407637 GPR26Q8NDV2 337 aa12.12□□□□□ -0.47
HERC3-203ENST00000407637 OR8J1Q8NGP2 316 aa12.12□□□□□ -0.47
HERC3-203ENST00000407637 OR52N1Q8NH53 320 aa12.12□□□□□ -0.47
HERC3-203ENST00000407637 RPLP0P6Q8NHW5 317 aa12.12□□□□□ -0.47
HERC3-203ENST00000407637 WDR89Q96FK6 387 aaPredicted RBP12.12□□□□□ -0.47
HERC3-203ENST00000407637 C10orf90Q96M02 699 aa12.12□□□□□ -0.47
HERC3-203ENST00000407637 UROC1Q96N76 676 aa12.12□□□□□ -0.47
HERC3-203ENST00000407637 BPIFA1Q9NP55 256 aa12.12□□□□□ -0.47
HERC3-203ENST00000407637 TIMM13Q9Y5L4 95 aaPredicted RBP12.12□□□□□ -0.47
HERC3-203ENST00000407637 PLXNB2O15031 1838 aa12.11□□□□□ -0.47
HERC3-203ENST00000407637 PIKFYVEQ9Y2I7 2098 aa12.11□□□□□ -0.47
HERC3-203ENST00000407637 OR6C75A6NL08 312 aa12.11□□□□□ -0.47
HERC3-203ENST00000407637 B4GALT3O60512 393 aa12.11□□□□□ -0.47
HERC3-203ENST00000407637 LAMP1P11279 417 aa12.11□□□□□ -0.47
HERC3-203ENST00000407637 ETFAP13804 333 aa12.11□□□□□ -0.47
HERC3-203ENST00000407637 HOXA11P31270 313 aaPredicted RBP12.11□□□□□ -0.47
HERC3-203ENST00000407637 PNPLA4P41247 253 aa12.11□□□□□ -0.47
HERC3-203ENST00000407637 CRATP43155 626 aa12.11□□□□□ -0.47
HERC3-203ENST00000407637 DHODHQ02127 395 aa12.11□□□□□ -0.47
HERC3-203ENST00000407637 FAM74A1Q5RGS3 127 aa12.11□□□□□ -0.47
HERC3-203ENST00000407637 COX20Q5RI15 118 aa12.11□□□□□ -0.47
HERC3-203ENST00000407637 LRRC28Q86X40 367 aaPredicted RBP12.11□□□□□ -0.47
HERC3-203ENST00000407637 ARIH2OSQ8N7S6 290 aa12.11□□□□□ -0.47
HERC3-203ENST00000407637 OR1M1Q8NGA1 313 aa12.11□□□□□ -0.47
HERC3-203ENST00000407637 OR6S1Q8NH40 331 aa12.11□□□□□ -0.47
HERC3-203ENST00000407637 UBL7Q96S82 380 aaPredicted RBP12.11□□□□□ -0.47
HERC3-203ENST00000407637 NTMT1Q9BV86 223 aa12.11□□□□□ -0.47
HERC3-203ENST00000407637 CA10Q9NS85 328 aa12.11□□□□□ -0.47
HERC3-203ENST00000407637 FLRT1Q9NZU1 646 aa12.11□□□□□ -0.47
HERC3-203ENST00000407637 RPS6KB2Q9UBS0 482 aa12.11□□□□□ -0.47
HERC3-203ENST00000407637 TESQ9UGI8 421 aaKnown RBP12.11□□□□□ -0.47
HERC3-203ENST00000407637 TNS1Q9HBL0 1735 aaKnown RBP12.11□□□□□ -0.47
HERC3-203ENST00000407637 TDRD15B5MCY1 1934 aaKnown RBP12.11□□□□□ -0.47
HERC3-203ENST00000407637 A0A0G2JPF8 293 aa12.11□□□□□ -0.47
HERC3-203ENST00000407637 MOXD2PA6NHM9 499 aa12.11□□□□□ -0.47
HERC3-203ENST00000407637 OR6C65A6NJZ3 312 aa12.11□□□□□ -0.47
HERC3-203ENST00000407637 HNRNPCL3B7ZW38 293 aa12.11□□□□□ -0.47
HERC3-203ENST00000407637 MCRIP1C9JLW8 97 aa12.11□□□□□ -0.47
HERC3-203ENST00000407637 SOCS7O14512 581 aa12.11□□□□□ -0.47
HERC3-203ENST00000407637 SUSD5O60279 629 aa12.11□□□□□ -0.47
HERC3-203ENST00000407637 EIF1BO60739 113 aaKnown RBP12.11□□□□□ -0.47
HERC3-203ENST00000407637 ZNF806P0C7X5 589 aa12.11□□□□□ -0.47
HERC3-203ENST00000407637 HNRNPCL4P0DMR1 293 aa12.11□□□□□ -0.47
HERC3-203ENST00000407637 PEPDP12955 493 aa12.11□□□□□ -0.47
HERC3-203ENST00000407637 EPB42P16452 691 aa12.11□□□□□ -0.47
HERC3-203ENST00000407637 NFYAP23511 347 aaPredicted RBP12.11□□□□□ -0.47
HERC3-203ENST00000407637 ACADLP28330 430 aa12.11□□□□□ -0.47
HERC3-203ENST00000407637 RBMS1P29558 406 aaKnown RBP12.11□□□□□ -0.47
HERC3-203ENST00000407637 EIF1P41567 113 aaKnown RBP12.11□□□□□ -0.47
HERC3-203ENST00000407637 KCNJ5P48544 419 aa12.11□□□□□ -0.47
HERC3-203ENST00000407637 TTPAP49638 278 aa12.11□□□□□ -0.47
HERC3-203ENST00000407637 MVDP53602 400 aa12.11□□□□□ -0.47
HERC3-203ENST00000407637 CCL23P55773 120 aa12.11□□□□□ -0.47
HERC3-203ENST00000407637 TAF1AQ15573 450 aaPredicted RBP12.11□□□□□ -0.47
HERC3-203ENST00000407637 PAN3Q58A45 887 aaKnown RBP12.11□□□□□ -0.47
HERC3-203ENST00000407637 SYT14P1Q58G82 188 aa12.11□□□□□ -0.47
HERC3-203ENST00000407637 HECTD3Q5T447 861 aa12.11□□□□□ -0.47
HERC3-203ENST00000407637 C5orf46Q6UWT4 87 aa12.11□□□□□ -0.47
HERC3-203ENST00000407637 SEZ6L2Q6UXD5 910 aa12.11□□□□□ -0.47
HERC3-203ENST00000407637 ALKAL1Q6UXT8 129 aa12.11□□□□□ -0.47
HERC3-203ENST00000407637 DEF8Q6ZN54 512 aa12.11□□□□□ -0.47
HERC3-203ENST00000407637 BTN2A1Q7KYR7 527 aa12.11□□□□□ -0.47
HERC3-203ENST00000407637 ASPGQ86U10 573 aa12.11□□□□□ -0.47
HERC3-203ENST00000407637 ZFP82Q8N141 532 aa12.11□□□□□ -0.47
HERC3-203ENST00000407637 TOP6BLQ8N6T0 577 aa12.11□□□□□ -0.47
HERC3-203ENST00000407637 NFKBIDQ8NI38 313 aa12.11□□□□□ -0.47
HERC3-203ENST00000407637 GEMIN6Q8WXD5 167 aaKnown RBP12.11□□□□□ -0.47
HERC3-203ENST00000407637 NARS2Q96I59 477 aaKnown RBP12.11□□□□□ -0.47
HERC3-203ENST00000407637 CRB3Q9BUF7 120 aa12.11□□□□□ -0.47
HERC3-203ENST00000407637 STARD7Q9NQZ5 370 aa12.11□□□□□ -0.47
HERC3-203ENST00000407637 DNAJC11Q9NVH1 559 aa12.11□□□□□ -0.47
HERC3-203ENST00000407637 NDOR1Q9UHB4 597 aa12.11□□□□□ -0.47
HERC3-203ENST00000407637 FLVCR2Q9UPI3 526 aa12.11□□□□□ -0.47
HERC3-203ENST00000407637 PATJQ8NI35 1801 aa12.11□□□□□ -0.47
HERC3-203ENST00000407637 RASGRP1O95267 797 aa12.1□□□□□ -0.47
HERC3-203ENST00000407637 CLDN9O95484 217 aa12.1□□□□□ -0.47
HERC3-203ENST00000407637 URODP06132 367 aa12.1□□□□□ -0.47
HERC3-203ENST00000407637 OR12D1P0DN82 309 aa12.1□□□□□ -0.47
HERC3-203ENST00000407637 SELLP14151 372 aa12.1□□□□□ -0.47
HERC3-203ENST00000407637 EDNRBP24530 442 aa12.1□□□□□ -0.47
HERC3-203ENST00000407637 CTSCP53634 463 aa12.1□□□□□ -0.47
HERC3-203ENST00000407637 GK2Q14410 553 aaPredicted RBP12.1□□□□□ -0.47
HERC3-203ENST00000407637 SF1Q15637 639 aaKnown RBP12.1□□□□□ -0.47
HERC3-203ENST00000407637 XKR6Q5GH73 641 aa12.1□□□□□ -0.47
HERC3-203ENST00000407637 NOXRED1Q6NXP6 359 aa12.1□□□□□ -0.47
HERC3-203ENST00000407637 HAGHLQ6PII5 290 aaPredicted RBP12.1□□□□□ -0.47
HERC3-203ENST00000407637 CBLN2Q8IUK8 224 aa12.1□□□□□ -0.47
HERC3-203ENST00000407637 TEX26Q8N6G2 289 aa12.1□□□□□ -0.47
HERC3-203ENST00000407637 LINC01465Q8N7H1 131 aa12.1□□□□□ -0.47
HERC3-203ENST00000407637 ADAMTS19Q8TE59 1207 aa12.1□□□□□ -0.47
HERC3-203ENST00000407637 PIGKQ92643 395 aa12.1□□□□□ -0.47
HERC3-203ENST00000407637 ZNF707Q96C28 371 aaPredicted RBP12.1□□□□□ -0.47
HERC3-203ENST00000407637 LRR1Q96L50 414 aa12.1□□□□□ -0.47
HERC3-203ENST00000407637 PKP4Q99569 1192 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms