RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 DCDC2Q9UHG0 476 aa17.71■□□□□ 0.43
SMARCB1-204ENST00000407422 ACAD8Q9UKU7 415 aa17.71■□□□□ 0.43
SMARCB1-204ENST00000407422 FAM215AQ9Y5M1 114 aa17.71■□□□□ 0.43
SMARCB1-204ENST00000407422 TRGV5A0A0B4J1U4 118 aa17.7■□□□□ 0.42
SMARCB1-204ENST00000407422 CSNK2A2P19784 350 aaPredicted RBP17.7■□□□□ 0.42
SMARCB1-204ENST00000407422 TRA2BP62995 288 aaKnown RBP17.7■□□□□ 0.42
SMARCB1-204ENST00000407422 RTL6Q6ICC9 239 aa17.7■□□□□ 0.42
SMARCB1-204ENST00000407422 SCIMPQ6UWF3 145 aa17.7■□□□□ 0.42
SMARCB1-204ENST00000407422 SH2D5Q6ZV89 423 aa17.7■□□□□ 0.42
SMARCB1-204ENST00000407422 APIPQ96GX9 242 aa17.7■□□□□ 0.42
SMARCB1-204ENST00000407422 FAIM2Q9BWQ8 316 aa17.7■□□□□ 0.42
SMARCB1-204ENST00000407422 SLC6A15Q9H2J7 730 aa17.7■□□□□ 0.42
SMARCB1-204ENST00000407422 EXO5Q9H790 373 aa17.7■□□□□ 0.42
SMARCB1-204ENST00000407422 BCAP29Q9UHQ4 241 aa17.7■□□□□ 0.42
SMARCB1-204ENST00000407422 ZNF639Q9UID6 485 aa17.7■□□□□ 0.42
SMARCB1-204ENST00000407422 ARHGAP21Q5T5U3 1957 aa17.7■□□□□ 0.42
SMARCB1-204ENST00000407422 ANKRD33BA6NCL7 494 aa17.69■□□□□ 0.42
SMARCB1-204ENST00000407422 NKX2-6A6NCS4 301 aa17.69■□□□□ 0.42
SMARCB1-204ENST00000407422 FAM90A27PA6NNH2 459 aa17.69■□□□□ 0.42
SMARCB1-204ENST00000407422 G3V2L1 256 aa17.69■□□□□ 0.42
SMARCB1-204ENST00000407422 UBFD1O14562 309 aaKnown RBP17.69■□□□□ 0.42
SMARCB1-204ENST00000407422 TP53I11O14683 189 aa17.69■□□□□ 0.42
SMARCB1-204ENST00000407422 HCN1O60741 890 aa17.69■□□□□ 0.42
SMARCB1-204ENST00000407422 TRIM3O75382 744 aaPredicted RBP17.69■□□□□ 0.42
SMARCB1-204ENST00000407422 ESRRBO95718 433 aa17.69■□□□□ 0.42
SMARCB1-204ENST00000407422 ABCD3P28288 659 aa17.69■□□□□ 0.42
SMARCB1-204ENST00000407422 CHRNB4P30926 498 aa17.69■□□□□ 0.42
SMARCB1-204ENST00000407422 SLCO1A2P46721 670 aa17.69■□□□□ 0.42
SMARCB1-204ENST00000407422 TRPC1P48995 793 aa17.69■□□□□ 0.42
SMARCB1-204ENST00000407422 FOXA1P55317 472 aa17.69■□□□□ 0.42
SMARCB1-204ENST00000407422 TRMT12Q53H54 448 aaKnown RBP17.69■□□□□ 0.42
SMARCB1-204ENST00000407422 CCNYL1Q8N7R7 359 aa17.69■□□□□ 0.42
SMARCB1-204ENST00000407422 C17orf47Q8NEP4 570 aa17.69■□□□□ 0.42
SMARCB1-204ENST00000407422 LILRB4Q8NHJ6 448 aa17.69■□□□□ 0.42
SMARCB1-204ENST00000407422 SPPL2AQ8TCT8 520 aa17.69■□□□□ 0.42
SMARCB1-204ENST00000407422 ASB5Q8WWX0 329 aa17.69■□□□□ 0.42
SMARCB1-204ENST00000407422 RILPQ96NA2 401 aa17.69■□□□□ 0.42
SMARCB1-204ENST00000407422 RYDENQ9NUL5 291 aaKnown RBP17.69■□□□□ 0.42
SMARCB1-204ENST00000407422 MCM8Q9UJA3 840 aa17.69■□□□□ 0.42
SMARCB1-204ENST00000407422 UTS2RQ9UKP6 389 aa17.69■□□□□ 0.42
SMARCB1-204ENST00000407422 PSME2Q9UL46 239 aa17.69■□□□□ 0.42
SMARCB1-204ENST00000407422 DLGAP4Q9Y2H0 992 aa17.69■□□□□ 0.42
SMARCB1-204ENST00000407422 MED12Q93074 2177 aa17.69■□□□□ 0.42
SMARCB1-204ENST00000407422 CELSR1Q9NYQ6 3014 aa17.69■□□□□ 0.42
SMARCB1-204ENST00000407422 FIGNL2A6NMB9 653 aa17.69■□□□□ 0.42
SMARCB1-204ENST00000407422 CAPN14A8MX76 684 aa17.69■□□□□ 0.42
SMARCB1-204ENST00000407422 PCDH7O60245 1069 aa17.69■□□□□ 0.42
SMARCB1-204ENST00000407422 CBX7O95931 251 aa17.69■□□□□ 0.42
SMARCB1-204ENST00000407422 IL3P08700 152 aa17.69■□□□□ 0.42
SMARCB1-204ENST00000407422 PKNOX1P55347 436 aa17.69■□□□□ 0.42
SMARCB1-204ENST00000407422 NRG3P56975 720 aa17.69■□□□□ 0.42
SMARCB1-204ENST00000407422 MRPS35P82673 323 aaKnown RBP17.69■□□□□ 0.42
SMARCB1-204ENST00000407422 DESI1Q6ICB0 168 aa17.69■□□□□ 0.42
SMARCB1-204ENST00000407422 ACAD11Q709F0 780 aa17.69■□□□□ 0.42
SMARCB1-204ENST00000407422 GBP7Q8N8V2 638 aaPredicted RBP17.69■□□□□ 0.42
SMARCB1-204ENST00000407422 ACBD4Q8NC06 268 aa17.69■□□□□ 0.42
SMARCB1-204ENST00000407422 UBLCP1Q8WVY7 318 aaPredicted RBP17.69■□□□□ 0.42
SMARCB1-204ENST00000407422 SARAFQ96BY9 339 aa17.69■□□□□ 0.42
SMARCB1-204ENST00000407422 CTHRC1Q96CG8 243 aa17.69■□□□□ 0.42
SMARCB1-204ENST00000407422 SPOCK3Q9BQ16 436 aa17.69■□□□□ 0.42
SMARCB1-204ENST00000407422 TTYH2Q9BSA4 534 aa17.69■□□□□ 0.42
SMARCB1-204ENST00000407422 ITPAQ9BY32 194 aa17.69■□□□□ 0.42
SMARCB1-204ENST00000407422 ENKD1Q9H0I2 346 aa17.69■□□□□ 0.42
SMARCB1-204ENST00000407422 MID1IP1Q9NPA3 183 aa17.69■□□□□ 0.42
SMARCB1-204ENST00000407422 ACKR4Q9NPB9 350 aa17.69■□□□□ 0.42
SMARCB1-204ENST00000407422 ALKBH4Q9NXW9 302 aa17.69■□□□□ 0.42
SMARCB1-204ENST00000407422 PLLPQ9Y342 182 aa17.69■□□□□ 0.42
SMARCB1-204ENST00000407422 ZNF780BQ9Y6R6 833 aa17.69■□□□□ 0.42
SMARCB1-204ENST00000407422 GNG14A0A1W2PPG7 69 aa17.68■□□□□ 0.42
SMARCB1-204ENST00000407422 ENO1P06733 434 aaKnown RBP17.68■□□□□ 0.42
SMARCB1-204ENST00000407422 ABCB1P08183 1280 aaPredicted RBP17.68■□□□□ 0.42
SMARCB1-204ENST00000407422 GLI4P10075 376 aa17.68■□□□□ 0.42
SMARCB1-204ENST00000407422 PCSK2P16519 638 aa17.68■□□□□ 0.42
SMARCB1-204ENST00000407422 BTKQ06187 659 aa17.68■□□□□ 0.42
SMARCB1-204ENST00000407422 TFF3Q07654 80 aa17.68■□□□□ 0.42
SMARCB1-204ENST00000407422 TBCELQ5QJ74 424 aa17.68■□□□□ 0.42
SMARCB1-204ENST00000407422 FNDC7Q5VTL7 733 aa17.68■□□□□ 0.42
SMARCB1-204ENST00000407422 TMEM198Q66K66 360 aa17.68■□□□□ 0.42
SMARCB1-204ENST00000407422 ZYG11AQ6WRX3 759 aa17.68■□□□□ 0.42
SMARCB1-204ENST00000407422 B3GNT6Q6ZMB0 384 aa17.68■□□□□ 0.42
SMARCB1-204ENST00000407422 CCDC116Q8IYX3 515 aa17.68■□□□□ 0.42
SMARCB1-204ENST00000407422 OR52R1Q8NGF1 315 aa17.68■□□□□ 0.42
SMARCB1-204ENST00000407422 OR10Q1Q8NGQ4 319 aa17.68■□□□□ 0.42
SMARCB1-204ENST00000407422 ZNF597Q96LX8 424 aa17.68■□□□□ 0.42
SMARCB1-204ENST00000407422 EBPLQ9BY08 206 aa17.68■□□□□ 0.42
SMARCB1-204ENST00000407422 ANGPTL4Q9BY76 406 aa17.68■□□□□ 0.42
SMARCB1-204ENST00000407422 C12orf65Q9H3J6 166 aaKnown RBP17.68■□□□□ 0.42
SMARCB1-204ENST00000407422 ANKRA2Q9H9E1 313 aa17.68■□□□□ 0.42
SMARCB1-204ENST00000407422 NPDC1Q9NQX5 325 aaPredicted RBP17.68■□□□□ 0.42
SMARCB1-204ENST00000407422 STK38LQ9Y2H1 464 aa17.68■□□□□ 0.42
SMARCB1-204ENST00000407422 CCDC168Q8NDH2 2452 aa17.68■□□□□ 0.42
SMARCB1-204ENST00000407422 SMIM23A6NLE4 172 aa17.67■□□□□ 0.42
SMARCB1-204ENST00000407422 ENO4A6NNW6 628 aa17.67■□□□□ 0.42
SMARCB1-204ENST00000407422 GLRA3O75311 464 aa17.67■□□□□ 0.42
SMARCB1-204ENST00000407422 NME6O75414 186 aaPredicted RBP17.67■□□□□ 0.42
SMARCB1-204ENST00000407422 TOXO94900 526 aa17.67■□□□□ 0.42
SMARCB1-204ENST00000407422 PROCP04070 461 aa17.67■□□□□ 0.42
SMARCB1-204ENST00000407422 MYL2P10916 166 aa17.67■□□□□ 0.42
SMARCB1-204ENST00000407422 GDF1P27539 372 aa17.67■□□□□ 0.42
SMARCB1-204ENST00000407422 CASP3P42574 277 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms