RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 GAB1Q13480 694 aa12.17□□□□□ -0.46
SMARCB1-203ENST00000407082 SF1Q15637 639 aaKnown RBP12.17□□□□□ -0.46
SMARCB1-203ENST00000407082 LINC00303Q3SY05 128 aa12.17□□□□□ -0.46
SMARCB1-203ENST00000407082 SPDYE7PQ495Y7 208 aa12.17□□□□□ -0.46
SMARCB1-203ENST00000407082 XKR5Q6UX68 686 aa12.17□□□□□ -0.46
SMARCB1-203ENST00000407082 VTCN1Q7Z7D3 282 aa12.17□□□□□ -0.46
SMARCB1-203ENST00000407082 P3H2Q8IVL5 708 aa12.17□□□□□ -0.46
SMARCB1-203ENST00000407082 BPIFB6Q8NFQ5 453 aa12.17□□□□□ -0.46
SMARCB1-203ENST00000407082 IFI44Q8TCB0 444 aa12.17□□□□□ -0.46
SMARCB1-203ENST00000407082 RORBQ92753 470 aa12.17□□□□□ -0.46
SMARCB1-203ENST00000407082 IL17FQ96PD4 163 aa12.17□□□□□ -0.46
SMARCB1-203ENST00000407082 ZNF300Q96RE9 604 aaPredicted RBP12.17□□□□□ -0.46
SMARCB1-203ENST00000407082 DPH2Q9BQC3 489 aaPredicted RBP12.17□□□□□ -0.46
SMARCB1-203ENST00000407082 DUSP23Q9BVJ7 150 aa12.17□□□□□ -0.46
SMARCB1-203ENST00000407082 GABARAPL3Q9BY60 117 aa12.17□□□□□ -0.46
SMARCB1-203ENST00000407082 SLC6A16Q9GZN6 736 aa12.17□□□□□ -0.46
SMARCB1-203ENST00000407082 DDX31Q9H8H2 851 aaKnown RBP12.17□□□□□ -0.46
SMARCB1-203ENST00000407082 A4GALTQ9NPC4 353 aa12.17□□□□□ -0.46
SMARCB1-203ENST00000407082 EXD2Q9NVH0 621 aa12.17□□□□□ -0.46
SMARCB1-203ENST00000407082 EVA1BQ9NVM1 165 aa12.17□□□□□ -0.46
SMARCB1-203ENST00000407082 TAS2R7Q9NYW3 318 aa12.17□□□□□ -0.46
SMARCB1-203ENST00000407082 NLGN3Q9NZ94 848 aa12.17□□□□□ -0.46
SMARCB1-203ENST00000407082 TAAR2Q9P1P5 351 aa12.17□□□□□ -0.46
SMARCB1-203ENST00000407082 UTS2RQ9UKP6 389 aa12.17□□□□□ -0.46
SMARCB1-203ENST00000407082 PSME2Q9UL46 239 aa12.17□□□□□ -0.46
SMARCB1-203ENST00000407082 EXO1Q9UQ84 846 aaKnown RBP12.17□□□□□ -0.46
SMARCB1-203ENST00000407082 UBR5O95071 2799 aaPredicted RBP12.17□□□□□ -0.46
SMARCB1-203ENST00000407082 NUP214P35658 2090 aaPredicted RBP12.16□□□□□ -0.46
SMARCB1-203ENST00000407082 PMS2P1A4D2B8 440 aa12.16□□□□□ -0.46
SMARCB1-203ENST00000407082 H3BMQ9 156 aa12.16□□□□□ -0.46
SMARCB1-203ENST00000407082 SAP18O00422 153 aaKnown RBP12.16□□□□□ -0.46
SMARCB1-203ENST00000407082 PLPP1O14494 284 aa12.16□□□□□ -0.46
SMARCB1-203ENST00000407082 OR1F1O43749 312 aa12.16□□□□□ -0.46
SMARCB1-203ENST00000407082 SERPINB7O75635 380 aa12.16□□□□□ -0.46
SMARCB1-203ENST00000407082 B3GALT4O96024 378 aa12.16□□□□□ -0.46
SMARCB1-203ENST00000407082 IFNW1P05000 195 aa12.16□□□□□ -0.46
SMARCB1-203ENST00000407082 FAM87AP0C7U9 286 aa12.16□□□□□ -0.46
SMARCB1-203ENST00000407082 GIMD1P0DJR0 217 aa12.16□□□□□ -0.46
SMARCB1-203ENST00000407082 GP1BBP13224 206 aa12.16□□□□□ -0.46
SMARCB1-203ENST00000407082 ETFAP13804 333 aa12.16□□□□□ -0.46
SMARCB1-203ENST00000407082 RPL10P27635 214 aaKnown RBP12.16□□□□□ -0.46
SMARCB1-203ENST00000407082 CMPK1P30085 196 aa12.16□□□□□ -0.46
SMARCB1-203ENST00000407082 PPP2R1BP30154 601 aa12.16□□□□□ -0.46
SMARCB1-203ENST00000407082 NTSP30990 170 aa12.16□□□□□ -0.46
SMARCB1-203ENST00000407082 BSGP35613 385 aa12.16□□□□□ -0.46
SMARCB1-203ENST00000407082 PIGAP37287 484 aa12.16□□□□□ -0.46
SMARCB1-203ENST00000407082 FRKP42685 505 aaPredicted RBP12.16□□□□□ -0.46
SMARCB1-203ENST00000407082 SPIBQ01892 262 aa12.16□□□□□ -0.46
SMARCB1-203ENST00000407082 MEF2AQ02078 507 aaPredicted RBP12.16□□□□□ -0.46
SMARCB1-203ENST00000407082 CLN3Q13286 438 aa12.16□□□□□ -0.46
SMARCB1-203ENST00000407082 MICAQ29983 383 aa12.16□□□□□ -0.46
SMARCB1-203ENST00000407082 SAXO2Q658L1 398 aa12.16□□□□□ -0.46
SMARCB1-203ENST00000407082 OR4C11Q6IEV9 310 aa12.16□□□□□ -0.46
SMARCB1-203ENST00000407082 RNF130Q86XS8 419 aa12.16□□□□□ -0.46
SMARCB1-203ENST00000407082 ANKRD13BQ86YJ7 626 aa12.16□□□□□ -0.46
SMARCB1-203ENST00000407082 HS3ST5Q8IZT8 346 aa12.16□□□□□ -0.46
SMARCB1-203ENST00000407082 ARL14Q8N4G2 192 aa12.16□□□□□ -0.46
SMARCB1-203ENST00000407082 LINC00471Q8N535 108 aa12.16□□□□□ -0.46
SMARCB1-203ENST00000407082 NFKBIDQ8NI38 313 aa12.16□□□□□ -0.46
SMARCB1-203ENST00000407082 NR4A3Q92570 626 aa12.16□□□□□ -0.46
SMARCB1-203ENST00000407082 PROX1Q92786 737 aa12.16□□□□□ -0.46
SMARCB1-203ENST00000407082 MYDGFQ969H8 173 aa12.16□□□□□ -0.46
SMARCB1-203ENST00000407082 MUL1Q969V5 352 aa12.16□□□□□ -0.46
SMARCB1-203ENST00000407082 SLC22A18Q96BI1 424 aa12.16□□□□□ -0.46
SMARCB1-203ENST00000407082 TM4SF18Q96CE8 201 aa12.16□□□□□ -0.46
SMARCB1-203ENST00000407082 HRASLS5Q96KN8 279 aa12.16□□□□□ -0.46
SMARCB1-203ENST00000407082 COG8Q96MW5 612 aa12.16□□□□□ -0.46
SMARCB1-203ENST00000407082 TEFMQ96QE5 360 aaKnown RBP12.16□□□□□ -0.46
SMARCB1-203ENST00000407082 PIP5K1AQ99755 562 aa12.16□□□□□ -0.46
SMARCB1-203ENST00000407082 MAPKAP1Q9BPZ7 522 aa12.16□□□□□ -0.46
SMARCB1-203ENST00000407082 CCDC90BQ9GZT6 254 aa12.16□□□□□ -0.46
SMARCB1-203ENST00000407082 DUSP21Q9H596 190 aa12.16□□□□□ -0.46
SMARCB1-203ENST00000407082 SYNDIG1Q9H7V2 258 aa12.16□□□□□ -0.46
SMARCB1-203ENST00000407082 MRPS30Q9NP92 439 aaKnown RBP12.16□□□□□ -0.46
SMARCB1-203ENST00000407082 PRDM8Q9NQV8 689 aa12.16□□□□□ -0.46
SMARCB1-203ENST00000407082 SEMA3GQ9NS98 782 aa12.16□□□□□ -0.46
SMARCB1-203ENST00000407082 PLCXD1Q9NUJ7 323 aa12.16□□□□□ -0.46
SMARCB1-203ENST00000407082 GIMAP4Q9NUV9 329 aa12.16□□□□□ -0.46
SMARCB1-203ENST00000407082 TBC1D29Q9UFV1 150 aa12.16□□□□□ -0.46
SMARCB1-203ENST00000407082 WARS2Q9UGM6 360 aaKnown RBP12.16□□□□□ -0.46
SMARCB1-203ENST00000407082 TMCC3Q9ULS5 477 aa12.16□□□□□ -0.46
SMARCB1-203ENST00000407082 SNX7Q9UNH6 387 aa12.16□□□□□ -0.46
SMARCB1-203ENST00000407082 SH2B3Q9UQQ2 575 aa12.16□□□□□ -0.46
SMARCB1-203ENST00000407082 A0A1W2PNU3 283 aaPredicted RBP12.15□□□□□ -0.46
SMARCB1-203ENST00000407082 PDZK1P1A8MUH7 402 aa12.15□□□□□ -0.46
SMARCB1-203ENST00000407082 B4DGG1 531 aa12.15□□□□□ -0.46
SMARCB1-203ENST00000407082 PTGES3LE9PB15 166 aa12.15□□□□□ -0.46
SMARCB1-203ENST00000407082 H7BY64 318 aa12.15□□□□□ -0.46
SMARCB1-203ENST00000407082 RGS10O43665 173 aa12.15□□□□□ -0.46
SMARCB1-203ENST00000407082 FAM20BO75063 409 aa12.15□□□□□ -0.46
SMARCB1-203ENST00000407082 OXSR1O95747 527 aaPredicted RBP12.15□□□□□ -0.46
SMARCB1-203ENST00000407082 GP1BAP07359 652 aa12.15□□□□□ -0.46
SMARCB1-203ENST00000407082 IL7RP16871 459 aa12.15□□□□□ -0.46
SMARCB1-203ENST00000407082 PKLRP30613 574 aa12.15□□□□□ -0.46
SMARCB1-203ENST00000407082 YAP1P46937 504 aaKnown RBP12.15□□□□□ -0.46
SMARCB1-203ENST00000407082 SERPINB10P48595 397 aa12.15□□□□□ -0.46
SMARCB1-203ENST00000407082 CLK3P49761 638 aaKnown RBP12.15□□□□□ -0.46
SMARCB1-203ENST00000407082 ST13P50502 369 aaKnown RBP12.15□□□□□ -0.46
SMARCB1-203ENST00000407082 HMGA2P52926 109 aa12.15□□□□□ -0.46
SMARCB1-203ENST00000407082 MVDP53602 400 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms