RNA–Protein interactions for RNA: ENST00000406881.3

PCDH11X-207, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-207ENST00000406881 CASRP41180 1078 aa4.49□□□□□ -1.69
PCDH11X-207ENST00000406881 EIF2B2P49770 351 aaKnown RBP4.49□□□□□ -1.69
PCDH11X-207ENST00000406881 CCR5P51681 352 aa4.49□□□□□ -1.69
PCDH11X-207ENST00000406881 AP3S2P59780 193 aa4.49□□□□□ -1.69
PCDH11X-207ENST00000406881 RAB14P61106 215 aa4.49□□□□□ -1.69
PCDH11X-207ENST00000406881 RPS26P62854 115 aaKnown RBP4.49□□□□□ -1.69
PCDH11X-207ENST00000406881 CD47Q08722 323 aa4.49□□□□□ -1.69
PCDH11X-207ENST00000406881 POU4F2Q12837 409 aa4.49□□□□□ -1.69
PCDH11X-207ENST00000406881 RAB39AQ14964 217 aa4.49□□□□□ -1.69
PCDH11X-207ENST00000406881 TSTQ16762 297 aaKnown RBP4.49□□□□□ -1.69
PCDH11X-207ENST00000406881 FAM71E1Q6IPT2 247 aa4.49□□□□□ -1.69
PCDH11X-207ENST00000406881 POMZP3Q6PJE2 187 aa4.49□□□□□ -1.69
PCDH11X-207ENST00000406881 PARM1Q6UWI2 310 aa4.49□□□□□ -1.69
PCDH11X-207ENST00000406881 HDDC2Q7Z4H3 204 aa4.49□□□□□ -1.69
PCDH11X-207ENST00000406881 DEFB119Q8N690 84 aa4.49□□□□□ -1.69
PCDH11X-207ENST00000406881 Q8N9G6 341 aaPredicted RBP4.49□□□□□ -1.69
PCDH11X-207ENST00000406881 OR2L3Q8NG85 312 aa4.49□□□□□ -1.69
PCDH11X-207ENST00000406881 SP7Q8TDD2 431 aaPredicted RBP4.49□□□□□ -1.69
PCDH11X-207ENST00000406881 CIDECQ96AQ7 238 aaPredicted RBP4.49□□□□□ -1.69
PCDH11X-207ENST00000406881 CHFRQ96EP1 664 aa4.49□□□□□ -1.69
PCDH11X-207ENST00000406881 SGTBQ96EQ0 304 aa4.49□□□□□ -1.69
PCDH11X-207ENST00000406881 TPSD1Q9BZJ3 242 aa4.49□□□□□ -1.69
PCDH11X-207ENST00000406881 STRADBQ9C0K7 418 aa4.49□□□□□ -1.69
PCDH11X-207ENST00000406881 MMP27Q9H306 513 aa4.49□□□□□ -1.69
PCDH11X-207ENST00000406881 TMEM38AQ9H6F2 299 aa4.49□□□□□ -1.69
PCDH11X-207ENST00000406881 TBC1D17Q9HA65 648 aa4.49□□□□□ -1.69
PCDH11X-207ENST00000406881 CUEDC1Q9NWM3 386 aaPredicted RBP4.49□□□□□ -1.69
PCDH11X-207ENST00000406881 TAAR2Q9P1P5 351 aa4.49□□□□□ -1.69
PCDH11X-207ENST00000406881 RARRES3Q9UL19 164 aa4.49□□□□□ -1.69
PCDH11X-207ENST00000406881 MMP17Q9ULZ9 603 aa4.49□□□□□ -1.69
PCDH11X-207ENST00000406881 MRPS7Q9Y2R9 242 aaKnown RBP4.49□□□□□ -1.69
PCDH11X-207ENST00000406881 SH3PXD2BA1X283 911 aa4.49□□□□□ -1.69
PCDH11X-207ENST00000406881 A8MU76 341 aa4.49□□□□□ -1.69
PCDH11X-207ENST00000406881 TP53I11O14683 189 aa4.49□□□□□ -1.69
PCDH11X-207ENST00000406881 PCDHGA12O60330 932 aa4.49□□□□□ -1.69
PCDH11X-207ENST00000406881 KLHL18O94889 574 aa4.49□□□□□ -1.69
PCDH11X-207ENST00000406881 MT-ND2P03891 347 aa4.49□□□□□ -1.69
PCDH11X-207ENST00000406881 HMGN2P05204 90 aaKnown RBP4.49□□□□□ -1.69
PCDH11X-207ENST00000406881 SYPP08247 313 aa4.49□□□□□ -1.69
PCDH11X-207ENST00000406881 PGCP20142 388 aa4.49□□□□□ -1.69
PCDH11X-207ENST00000406881 NR4A1P22736 598 aa4.49□□□□□ -1.69
PCDH11X-207ENST00000406881 AK4P27144 223 aaPredicted RBP4.49□□□□□ -1.69
PCDH11X-207ENST00000406881 NUP62P37198 522 aaPredicted RBP4.49□□□□□ -1.69
PCDH11X-207ENST00000406881 HBA1P69905 142 aa4.49□□□□□ -1.69
PCDH11X-207ENST00000406881 CSNK1G2P78368 415 aa4.49□□□□□ -1.69
PCDH11X-207ENST00000406881 PITPNAQ00169 270 aa4.49□□□□□ -1.69
PCDH11X-207ENST00000406881 MC1RQ01726 317 aa4.49□□□□□ -1.69
PCDH11X-207ENST00000406881 ZNF404Q494X3 552 aa4.49□□□□□ -1.69
PCDH11X-207ENST00000406881 ZNF542PQ5EBM4 170 aa4.49□□□□□ -1.69
PCDH11X-207ENST00000406881 PRAMEF8Q5VWM4 474 aa4.49□□□□□ -1.69
PCDH11X-207ENST00000406881 MLIPQ5VWP3 458 aa4.49□□□□□ -1.69
PCDH11X-207ENST00000406881 PRAMEF7Q5VXH5 474 aa4.49□□□□□ -1.69
PCDH11X-207ENST00000406881 ARHGAP11AQ6P4F7 1023 aa4.49□□□□□ -1.69
PCDH11X-207ENST00000406881 HSDL2Q6YN16 418 aa4.49□□□□□ -1.69
PCDH11X-207ENST00000406881 ZNF619Q8N2I2 560 aa4.49□□□□□ -1.69
PCDH11X-207ENST00000406881 OR4K17Q8NGC6 315 aa4.49□□□□□ -1.69
PCDH11X-207ENST00000406881 FANK1Q8TC84 345 aa4.49□□□□□ -1.69
PCDH11X-207ENST00000406881 ZNF675Q8TD23 568 aa4.49□□□□□ -1.69
PCDH11X-207ENST00000406881 FRS2Q8WU20 508 aa4.49□□□□□ -1.69
PCDH11X-207ENST00000406881 MAL2Q969L2 176 aa4.49□□□□□ -1.69
PCDH11X-207ENST00000406881 BMFQ96LC9 184 aa4.49□□□□□ -1.69
PCDH11X-207ENST00000406881 PRRC1Q96M27 445 aa4.49□□□□□ -1.69
PCDH11X-207ENST00000406881 MYADMQ96S97 322 aa4.49□□□□□ -1.69
PCDH11X-207ENST00000406881 DUSP23Q9BVJ7 150 aa4.49□□□□□ -1.69
PCDH11X-207ENST00000406881 BTBD2Q9BX70 525 aa4.49□□□□□ -1.69
PCDH11X-207ENST00000406881 EXO5Q9H790 373 aa4.49□□□□□ -1.69
PCDH11X-207ENST00000406881 PTGES2Q9H7Z7 377 aa4.49□□□□□ -1.69
PCDH11X-207ENST00000406881 DNAJC27Q9NZQ0 273 aa4.49□□□□□ -1.69
PCDH11X-207ENST00000406881 ERVK-18Q9QC07 812 aa4.49□□□□□ -1.69
PCDH11X-207ENST00000406881 MKLN1Q9UL63 735 aa4.49□□□□□ -1.69
PCDH11X-207ENST00000406881 UBE2QL1A1L167 161 aa4.48□□□□□ -1.69
PCDH11X-207ENST00000406881 SLC22A31A6NKX4 558 aa4.48□□□□□ -1.69
PCDH11X-207ENST00000406881 ZNF879B4DU55 563 aa4.48□□□□□ -1.69
PCDH11X-207ENST00000406881 XPNPEP2O43895 674 aa4.48□□□□□ -1.69
PCDH11X-207ENST00000406881 CISD3P0C7P0 127 aa4.48□□□□□ -1.69
PCDH11X-207ENST00000406881 GGT2P36268 569 aa4.48□□□□□ -1.69
PCDH11X-207ENST00000406881 HNRNPFP52597 415 aaKnown RBP4.48□□□□□ -1.69
PCDH11X-207ENST00000406881 ADPRHP54922 357 aa4.48□□□□□ -1.69
PCDH11X-207ENST00000406881 ARPC4P59998 168 aa4.48□□□□□ -1.69
PCDH11X-207ENST00000406881 CDK5R2Q13319 367 aa4.48□□□□□ -1.69
PCDH11X-207ENST00000406881 SELPLGQ14242 412 aa4.48□□□□□ -1.69
PCDH11X-207ENST00000406881 SLC5A12Q1EHB4 618 aa4.48□□□□□ -1.69
PCDH11X-207ENST00000406881 ASTLQ6HA08 431 aaPredicted RBP4.48□□□□□ -1.69
PCDH11X-207ENST00000406881 KLHL17Q6TDP4 642 aa4.48□□□□□ -1.69
PCDH11X-207ENST00000406881 TMEM64Q6YI46 380 aa4.48□□□□□ -1.69
PCDH11X-207ENST00000406881 GDPGP1Q6ZNW5 385 aa4.48□□□□□ -1.69
PCDH11X-207ENST00000406881 TMEM150AQ86TG1 271 aa4.48□□□□□ -1.69
PCDH11X-207ENST00000406881 ZNF554Q86TJ5 538 aa4.48□□□□□ -1.69
PCDH11X-207ENST00000406881 MARCH9Q86YJ5 346 aa4.48□□□□□ -1.69
PCDH11X-207ENST00000406881 RAB43Q86YS6 212 aa4.48□□□□□ -1.69
PCDH11X-207ENST00000406881 CHERPQ8IWX8 916 aaKnown RBP4.48□□□□□ -1.69
PCDH11X-207ENST00000406881 GPALPP1Q8IXQ4 340 aa4.48□□□□□ -1.69
PCDH11X-207ENST00000406881 TDHQ8IZJ6 230 aa4.48□□□□□ -1.69
PCDH11X-207ENST00000406881 VWA5B2Q8N398 1253 aa4.48□□□□□ -1.69
PCDH11X-207ENST00000406881 OR6K6Q8NGW6 343 aa4.48□□□□□ -1.69
PCDH11X-207ENST00000406881 CNIH3Q8TBE1 160 aa4.48□□□□□ -1.69
PCDH11X-207ENST00000406881 UBASH3BQ8TF42 649 aa4.48□□□□□ -1.69
PCDH11X-207ENST00000406881 HLA-CQ95604 372 aa4.48□□□□□ -1.69
PCDH11X-207ENST00000406881 TRIM63Q969Q1 353 aa4.48□□□□□ -1.69
PCDH11X-207ENST00000406881 COQ8BQ96D53 544 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms