RNA–Protein interactions for RNA: ENST00000406757.2

GPC3-203, Transcript of glypican 3, humanhuman

TSL 2

Gene GPC3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-203ENST00000406757 DNASE1L3Q13609 305 aa7.79□□□□□ -1.16
GPC3-203ENST00000406757 ZNF267Q14586 743 aaPredicted RBP7.79□□□□□ -1.16
GPC3-203ENST00000406757 EXOSC7Q15024 291 aaKnown RBP7.79□□□□□ -1.16
GPC3-203ENST00000406757 ZSCAN26Q16670 478 aa7.79□□□□□ -1.16
GPC3-203ENST00000406757 TRMT12Q53H54 448 aaKnown RBP7.79□□□□□ -1.16
GPC3-203ENST00000406757 DLEU7Q6UYE1 221 aa7.79□□□□□ -1.16
GPC3-203ENST00000406757 ZNF517Q6ZMY9 492 aaPredicted RBP7.79□□□□□ -1.16
GPC3-203ENST00000406757 QSOX2Q6ZRP7 698 aa7.79□□□□□ -1.16
GPC3-203ENST00000406757 SZRD1Q7Z422 152 aa7.79□□□□□ -1.16
GPC3-203ENST00000406757 WDR53Q7Z5U6 358 aaPredicted RBP7.79□□□□□ -1.16
GPC3-203ENST00000406757 ANKRD37Q7Z713 158 aa7.79□□□□□ -1.16
GPC3-203ENST00000406757 DHDDSQ86SQ9 333 aa7.79□□□□□ -1.16
GPC3-203ENST00000406757 LRRC25Q8N386 305 aaPredicted RBP7.79□□□□□ -1.16
GPC3-203ENST00000406757 PLPP5Q8NEB5 264 aa7.79□□□□□ -1.16
GPC3-203ENST00000406757 VPS37AQ8NEZ2 397 aa7.79□□□□□ -1.16
GPC3-203ENST00000406757 OR7G2Q8NG99 324 aa7.79□□□□□ -1.16
GPC3-203ENST00000406757 ADAMTS18Q8TE60 1221 aa7.79□□□□□ -1.16
GPC3-203ENST00000406757 OR5P2Q8WZ92 322 aa7.79□□□□□ -1.16
GPC3-203ENST00000406757 STARD8Q92502 1023 aa7.79□□□□□ -1.16
GPC3-203ENST00000406757 FKBP10Q96AY3 582 aa7.79□□□□□ -1.16
GPC3-203ENST00000406757 OTUB1Q96FW1 271 aaPredicted RBP7.79□□□□□ -1.16
GPC3-203ENST00000406757 CCDC115Q96NT0 180 aa7.79□□□□□ -1.16
GPC3-203ENST00000406757 DGAT2Q96PD7 388 aa7.79□□□□□ -1.16
GPC3-203ENST00000406757 DPH2Q9BQC3 489 aaPredicted RBP7.79□□□□□ -1.16
GPC3-203ENST00000406757 YIPF4Q9BSR8 244 aa7.79□□□□□ -1.16
GPC3-203ENST00000406757 CNPPD1Q9BV87 410 aa7.79□□□□□ -1.16
GPC3-203ENST00000406757 SLC26A1Q9H2B4 701 aa7.79□□□□□ -1.16
GPC3-203ENST00000406757 PIF1Q9H611 641 aa7.79□□□□□ -1.16
GPC3-203ENST00000406757 RMND5AQ9H871 391 aa7.79□□□□□ -1.16
GPC3-203ENST00000406757 EFCAB1Q9HAE3 211 aa7.79□□□□□ -1.16
GPC3-203ENST00000406757 ZNF71Q9NQZ8 489 aaPredicted RBP7.79□□□□□ -1.16
GPC3-203ENST00000406757 SIRT3Q9NTG7 399 aaPredicted RBP7.79□□□□□ -1.16
GPC3-203ENST00000406757 FAM120CQ9NX05 1096 aaKnown RBP7.79□□□□□ -1.16
GPC3-203ENST00000406757 SLC25A37Q9NYZ2 338 aa7.79□□□□□ -1.16
GPC3-203ENST00000406757 VAPAQ9P0L0 249 aa7.79□□□□□ -1.16
GPC3-203ENST00000406757 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.79□□□□□ -1.16
GPC3-203ENST00000406757 BTNL2Q9UIR0 455 aa7.79□□□□□ -1.16
GPC3-203ENST00000406757 PCDHGB4Q9UN71 923 aa7.79□□□□□ -1.16
GPC3-203ENST00000406757 MAPRE3Q9UPY8 281 aa7.79□□□□□ -1.16
GPC3-203ENST00000406757 MMACHCQ9Y4U1 282 aa7.79□□□□□ -1.16
GPC3-203ENST00000406757 PCDHB14Q9Y5E9 798 aa7.79□□□□□ -1.16
GPC3-203ENST00000406757 SEC16AO15027 2179 aa7.78□□□□□ -1.16
GPC3-203ENST00000406757 AHCTF1Q8WYP5 2266 aa7.78□□□□□ -1.16
GPC3-203ENST00000406757 A0A096LPI6 279 aa7.78□□□□□ -1.16
GPC3-203ENST00000406757 IGKV3D-11A0A0A0MRZ8 115 aa7.78□□□□□ -1.16
GPC3-203ENST00000406757 TCRBV16S1A1N1A0A5B0 115 aa7.78□□□□□ -1.16
GPC3-203ENST00000406757 ZNF891A8MT65 544 aaPredicted RBP7.78□□□□□ -1.16
GPC3-203ENST00000406757 C17orf105B2RV13 164 aa7.78□□□□□ -1.16
GPC3-203ENST00000406757 SEC24DO94855 1032 aaPredicted RBP7.78□□□□□ -1.16
GPC3-203ENST00000406757 UNC5CO95185 931 aa7.78□□□□□ -1.16
GPC3-203ENST00000406757 KCNH1O95259 989 aa7.78□□□□□ -1.16
GPC3-203ENST00000406757 SLC35E2P0CK97 266 aa7.78□□□□□ -1.16
GPC3-203ENST00000406757 CALB2P22676 271 aa7.78□□□□□ -1.16
GPC3-203ENST00000406757 PTPN6P29350 595 aa7.78□□□□□ -1.16
GPC3-203ENST00000406757 SSTR4P31391 388 aa7.78□□□□□ -1.16
GPC3-203ENST00000406757 MPIP34949 423 aa7.78□□□□□ -1.16
GPC3-203ENST00000406757 FRKP42685 505 aaPredicted RBP7.78□□□□□ -1.16
GPC3-203ENST00000406757 STT3AP46977 705 aa7.78□□□□□ -1.16
GPC3-203ENST00000406757 MTPNP58546 118 aa7.78□□□□□ -1.16
GPC3-203ENST00000406757 PSME3P61289 254 aa7.78□□□□□ -1.16
GPC3-203ENST00000406757 RPS15P62841 145 aaKnown RBP7.78□□□□□ -1.16
GPC3-203ENST00000406757 RPS26P62854 115 aaKnown RBP7.78□□□□□ -1.16
GPC3-203ENST00000406757 IGLV3-21P80748 117 aaPredicted RBP7.78□□□□□ -1.16
GPC3-203ENST00000406757 DUSP8Q13202 625 aa7.78□□□□□ -1.16
GPC3-203ENST00000406757 MAP7Q14244 749 aa7.78□□□□□ -1.16
GPC3-203ENST00000406757 CEBPEQ15744 281 aa7.78□□□□□ -1.16
GPC3-203ENST00000406757 DPY19L1Q2PZI1 675 aa7.78□□□□□ -1.16
GPC3-203ENST00000406757 PRICKLE4Q2TBC4 344 aa7.78□□□□□ -1.16
GPC3-203ENST00000406757 SPDYE7PQ495Y7 208 aa7.78□□□□□ -1.16
GPC3-203ENST00000406757 SFT2D3Q587I9 215 aa7.78□□□□□ -1.16
GPC3-203ENST00000406757 ZNF628Q5EBL2 1059 aa7.78□□□□□ -1.16
GPC3-203ENST00000406757 RABL3Q5HYI8 236 aa7.78□□□□□ -1.16
GPC3-203ENST00000406757 ATP1A1-AS1Q5TC04 95 aa7.78□□□□□ -1.16
GPC3-203ENST00000406757 ANGPTL8Q6UXH0 198 aa7.78□□□□□ -1.16
GPC3-203ENST00000406757 KIF2BQ8N4N8 673 aa7.78□□□□□ -1.16
GPC3-203ENST00000406757 PCYOX1LQ8NBM8 494 aa7.78□□□□□ -1.16
GPC3-203ENST00000406757 RBM15BQ8NDT2 890 aaKnown RBP7.78□□□□□ -1.16
GPC3-203ENST00000406757 OR2Y1Q8NGV0 311 aa7.78□□□□□ -1.16
GPC3-203ENST00000406757 ZFP28Q8NHY6 868 aa7.78□□□□□ -1.16
GPC3-203ENST00000406757 FBXO30Q8TB52 745 aa7.78□□□□□ -1.16
GPC3-203ENST00000406757 TSPEARQ8WU66 669 aa7.78□□□□□ -1.16
GPC3-203ENST00000406757 PTPMT1Q8WUK0 201 aaPredicted RBP7.78□□□□□ -1.16
GPC3-203ENST00000406757 METTL21AQ8WXB1 218 aa7.78□□□□□ -1.16
GPC3-203ENST00000406757 RIT1Q92963 219 aa7.78□□□□□ -1.16
GPC3-203ENST00000406757 SLC7A6OSQ96CW6 309 aaPredicted RBP7.78□□□□□ -1.16
GPC3-203ENST00000406757 LRRC58Q96CX6 371 aa7.78□□□□□ -1.16
GPC3-203ENST00000406757 ELP4Q96EB1 424 aa7.78□□□□□ -1.16
GPC3-203ENST00000406757 ZBED6CLQ96FA7 236 aaPredicted RBP7.78□□□□□ -1.16
GPC3-203ENST00000406757 C16orf58Q96GQ5 468 aa7.78□□□□□ -1.16
GPC3-203ENST00000406757 RBM18Q96H35 190 aaKnown RBP7.78□□□□□ -1.16
GPC3-203ENST00000406757 SLC35A5Q9BS91 424 aa7.78□□□□□ -1.16
GPC3-203ENST00000406757 IKZF5Q9H5V7 419 aa7.78□□□□□ -1.16
GPC3-203ENST00000406757 GPN2Q9H9Y4 310 aaPredicted RBP7.78□□□□□ -1.16
GPC3-203ENST00000406757 EQTNQ9NQ60 294 aa7.78□□□□□ -1.16
GPC3-203ENST00000406757 ACSS1Q9NUB1 689 aaPredicted RBP7.78□□□□□ -1.16
GPC3-203ENST00000406757 C14orf105Q9NVL8 296 aa7.78□□□□□ -1.16
GPC3-203ENST00000406757 TMEM45AQ9NWC5 275 aa7.78□□□□□ -1.16
GPC3-203ENST00000406757 TAS2R9Q9NYW1 312 aa7.78□□□□□ -1.16
GPC3-203ENST00000406757 MAT2BQ9NZL9 334 aa7.78□□□□□ -1.16
GPC3-203ENST00000406757 BCAP29Q9UHQ4 241 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms